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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:646773..648494+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000360-T1 ID=KJC3_000360-T1|Name=KJC3_000360-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1722bp|location=Sequence derived from alignment at ch1:646773..648494+ (Aspergillus niger KJC3)
ATGGCATTCAAAGAAGACACCGAAACAGCCATCACCTCCACCTCCCTCGA
GGCCGGTGTGCTCGACGACAAGCCACCAAACGAGAACATAATCGACTGGG
ACGGCCCCCAGGACCCAGAAAACCCTCACAACTGGCCCGGACGCAAGCGA
TGGGCACACGTCATTGTAGTGGCCCTCATATCCCTAGTCATGTACCTGCA
ATCCTTCCCTAACAAAACCACCCTACTATTAACCCTACTCACCAGGAACA
TGGCTCCAACCATGTGCGCCCCGGGTATCAACGAAATCCTCAGTACCTTC
AACATCCAATCATCCACCATATCCACACTTGCAGTCACCCTGTACGTCCT
CGGCTTAGCAATGGGCCCCATGTTCATGTCCTCCCTCAGTGAAGTCTTCG
GCCGGCTTCCAGTATACCACCTCGCCAATCTCTTCTTCGTAGCCTTCGTC
ATCGGAAACGCCCTAAGCCAAAACATAGCTACCTTCATGATTTGTCGATT
CATCTCAGGCTGCGCGGGAGGAACTCCCATGGCTTTGGGAGGGGGCACCA
TTGCAGATGTGACCACCATCCAGCAACGCGCTGTCGCCATGTCTTTGTAT
AGTTTGGGTCCGATGGCTGGTCCGGTACGTCCCACTCTTTATCTAATTCT
TATACCCCTCAAAAAGACATACTATAATACAGGGACTCATCACCTCCTCT
CCCAATGATAGGTCCTCGGCCCCCTCATCGGCGGCTTCGTCGCATCCAAT
CTAACTTGGCGCTGGACTTTCTACCTCCTCGCCATCTTCTCCGGCACAAT
CGGCCTCGCATCCCTTCTAGTCATGCGCGAAACCCACCCCAAGATTATCC
TGGAACGAAAAGCAGCCCGTCTGCGCAAAGCGACGGGGGACCCCCACCTA
CGCTCGAAGCTCTCCGACCCCAAACCCGCACCCCAACTCCTCTTACAAGC
CCTAACTCGTCCCACGAAACTCCTCTTCCGCTCCCCAATACTCCTTATTA
TCTCGATCTACATGGCCCTCATATTCGGCCTGATGTACCTCCTCTTTACT
ACTTTCACGGACGTCTTCGAGACGCAGTATGGCTTCTCCACGGCGACGTC
GGGACTGGTCTATCTCGGTCTCGGCGTATCGTTGGTAACGTGCATGTTCA
TCGCAAAGCCGCTGGGTGAGCGCTTGACGGCGTATCATTCCGCGAAGAAA
GCAGATGATGGTACCCAGCAACAGCATCGAGCAGAATACCGTCTCCTCCC
GATGATATATTTCTCCCCGTGCGTGGCCATCGGACTATTTATTTACGGAT
GGACAGTGTACTACAAAGTGCACTGGATAGTGCCAATTATAGGGACGAGT
GTTATTGGGTTTGGGTCGTTTTTCGTGATGGTATGTAGCCTTTCTCCTCC
CTCCTTCTCATTTTATTCAGGGTGATTTGATTACTTACTAACACCCACTA
TGGCGCAGATGTCCGCACAGCTATATCTGATTGATCTGTTCGGGTCGAGT
GCATCAGCATCCGCGCTGGCTGCTAATAACGTGTTGCGGTTCATCTGCAG
TACCTTTTTGCCATTGGCGGGACCGGCTATGTATCGGAGTCTGGGGTATG
GGTGGGGGAATACGCTGCTGGGATTCTTGGCGTTGGGGTTTTTGCCGGCG
CCGGTGGTGTTTTATAGGTATGGGGGCTGGATGCATGCGAGGATGGGAGG
TGGGATTGATCCTTGCAAGTGA back to topCoding sequence (CDS) from alignment at ch1:646773..648494+ >KJC3_000360-T1 ID=KJC3_000360-T1|Name=KJC3_000360-T1|organism=Aspergillus niger KJC3|type=CDS|length=4671bp|location=Sequence derived from alignment at ch1:646773..648494+ (Aspergillus niger KJC3)
ATGGCATTCAAAGAAGACACCGAAACAGCCATCACCTCCACCTCCCTCGA
GGCCGGTGTGCTCGACGACAAGCCACCAAACGAGAACATAATCGACTGGG
ACGGCCCCCAGGACCCAGAAAACCCTCACAACTGGCCCGGACGCAAGCGA
TGGGCACACGTCATTGTAGTGGCCCTCATATCCCTAGTCATGTACCTGCA
ATCCTTCCCTAACAAAACCACCCTACTATTAACCCTACTCACCAGGAACA
TGGCTCCAACCATGTGCGCCCCGGGTATCAACGAAATCCTCAGTACCTTC
AACATCCAATCATCCACCATATCCACACTTGCAGTCACCCTGTACGTCCT
CGGCTTAGCAATGGGCCCCATGTTCATGTCCTCCCTCAGTGAAGTCTTCG
GCCGGCTTCCAGTATACCACCTCGCCAATCTCTTCTTCGTAGCCTTCGTC
ATCGGAAACGCCCTAAGCCAAAACATAGCTACCTTCATGATTTGTCGATT
CATCTCAGGCTGCGCGGGAGGAACTCCCATGGCTTTGGGAGGGGGCACCA
TTGCAGATGTGACCACCATCCAGCAACGCGCTGTCGCCATGTCTTTGTAT
AGTTTGGGTCCGATGGCTGGTCCGGTCCTCGGCCCCCTCATCGGCGGCTT
CGTCGCATCCAATCTAACTTGGCGCTGGACTTTCTACCTCCTCGCCATCT
TCTCCGGCACAATCGGCCTCGCATCCCTTCTAGTCATGCGCGAAACCCAC
CCCAAGATTATCCTGGAACGAAAAGCAGCCCGTCTGCGCAAAGCGACGGG
GGACCCCCACCTACGCTCGAAGCTCTCCGACCCCAAACCCGCACCCCAAC
TCCTCTTACAAGCCCTAACTCGTCCCACGAAACTCCTCTTCCGCTCCCCA
ATACTCCTTATTATCTCGATCTACATGGCCCTCATATTCGGCCTGATGTA
CCTCCTCTTTACTACTTTCACGGACGTCTTCGAGACGCAGTATGGCTTCT
CCACGGCGACGTCGGGACTGGTCTATCTCGGTCTCGGCGTATCGTTGGTA
ACGTGCATGTTCATCGCAAAGCCGCTGGGTGAGCGCTTGACGGCGTATCA
TTCCGCGAAGAAAGCAGATGATGGTACCCAGCAACAGCATCGAGCAGAAT
ACCGTCTCCTCCCGATGATATATTTCTCCCCGTGCGTGGCCATCGGACTA
TTTATTTACGGATGGACAGTGTACTACAAAGTGCACTGGATAGTGCCAAT
TATAGGGACGAGTGTTATTGGGTTTGGGTCGTTTTTCGTGATGATGTCCG
CACAGCTATATCTGATTGATCTGTTCGGGTCGAGTGCATCAGCATCCGCG
CTGGCTGCTAATAACGTGTTGCGGTTCATCTGCAGTACCTTTTTGCCATT
GGCGGGACCGGCTATGTATCGGAGTCTGGGGTATGGGTGGGGGAATACGC
TGCTGGGATTCTTGGCGTTGGGGTTTTTGCCGGCGCCGGTGGTGTTTTAT
AGGTATGGGGGCTGGATGCATGCGAGGATGGGAGGTGGGATTGATCCTTG
CAAGTGAATGGCATTCAAAGAAGACACCGAAACAGCCATCACCTCCACCT
CCCTCGAGGCCGGTGTGCTCGACGACAAGCCACCAAACGAGAACATAATC
GACTGGGACGGCCCCCAGGACCCAGAAAACCCTCACAACTGGCCCGGACG
CAAGCGATGGGCACACGTCATTGTAGTGGCCCTCATATCCCTAGTCATGT
ACCTGCAATCCTTCCCTAACAAAACCACCCTACTATTAACCCTACTCACC
AGGAACATGGCTCCAACCATGTGCGCCCCGGGTATCAACGAAATCCTCAG
TACCTTCAACATCCAATCATCCACCATATCCACACTTGCAGTCACCCTGT
ACGTCCTCGGCTTAGCAATGGGCCCCATGTTCATGTCCTCCCTCAGTGAA
GTCTTCGGCCGGCTTCCAGTATACCACCTCGCCAATCTCTTCTTCGTAGC
CTTCGTCATCGGAAACGCCCTAAGCCAAAACATAGCTACCTTCATGATTT
GTCGATTCATCTCAGGCTGCGCGGGAGGAACTCCCATGGCTTTGGGAGGG
GGCACCATTGCAGATGTGACCACCATCCAGCAACGCGCTGTCGCCATGTC
TTTGTATAGTTTGGGTCCGATGGCTGGTCCGGTCCTCGGCCCCCTCATCG
GCGGCTTCGTCGCATCCAATCTAACTTGGCGCTGGACTTTCTACCTCCTC
GCCATCTTCTCCGGCACAATCGGCCTCGCATCCCTTCTAGTCATGCGCGA
AACCCACCCCAAGATTATCCTGGAACGAAAAGCAGCCCGTCTGCGCAAAG
CGACGGGGGACCCCCACCTACGCTCGAAGCTCTCCGACCCCAAACCCGCA
CCCCAACTCCTCTTACAAGCCCTAACTCGTCCCACGAAACTCCTCTTCCG
CTCCCCAATACTCCTTATTATCTCGATCTACATGGCCCTCATATTCGGCC
TGATGTACCTCCTCTTTACTACTTTCACGGACGTCTTCGAGACGCAGTAT
GGCTTCTCCACGGCGACGTCGGGACTGGTCTATCTCGGTCTCGGCGTATC
GTTGGTAACGTGCATGTTCATCGCAAAGCCGCTGGGTGAGCGCTTGACGG
CGTATCATTCCGCGAAGAAAGCAGATGATGGTACCCAGCAACAGCATCGA
GCAGAATACCGTCTCCTCCCGATGATATATTTCTCCCCGTGCGTGGCCAT
CGGACTATTTATTTACGGATGGACAGTGTACTACAAAGTGCACTGGATAG
TGCCAATTATAGGGACGAGTGTTATTGGGTTTGGGTCGTTTTTCGTGATG
ATGTCCGCACAGCTATATCTGATTGATCTGTTCGGGTCGAGTGCATCAGC
ATCCGCGCTGGCTGCTAATAACGTGTTGCGGTTCATCTGCAGTACCTTTT
TGCCATTGGCGGGACCGGCTATGTATCGGAGTCTGGGGTATGGGTGGGGG
AATACGCTGCTGGGATTCTTGGCGTTGGGGTTTTTGCCGGCGCCGGTGGT
GTTTTATAGGTATGGGGGCTGGATGCATGCGAGGATGGGAGGTGGGATTG
ATCCTTGCAAGTGAATGGCATTCAAAGAAGACACCGAAACAGCCATCACC
TCCACCTCCCTCGAGGCCGGTGTGCTCGACGACAAGCCACCAAACGAGAA
CATAATCGACTGGGACGGCCCCCAGGACCCAGAAAACCCTCACAACTGGC
CCGGACGCAAGCGATGGGCACACGTCATTGTAGTGGCCCTCATATCCCTA
GTCATGTACCTGCAATCCTTCCCTAACAAAACCACCCTACTATTAACCCT
ACTCACCAGGAACATGGCTCCAACCATGTGCGCCCCGGGTATCAACGAAA
TCCTCAGTACCTTCAACATCCAATCATCCACCATATCCACACTTGCAGTC
ACCCTGTACGTCCTCGGCTTAGCAATGGGCCCCATGTTCATGTCCTCCCT
CAGTGAAGTCTTCGGCCGGCTTCCAGTATACCACCTCGCCAATCTCTTCT
TCGTAGCCTTCGTCATCGGAAACGCCCTAAGCCAAAACATAGCTACCTTC
ATGATTTGTCGATTCATCTCAGGCTGCGCGGGAGGAACTCCCATGGCTTT
GGGAGGGGGCACCATTGCAGATGTGACCACCATCCAGCAACGCGCTGTCG
CCATGTCTTTGTATAGTTTGGGTCCGATGGCTGGTCCGGTCCTCGGCCCC
CTCATCGGCGGCTTCGTCGCATCCAATCTAACTTGGCGCTGGACTTTCTA
CCTCCTCGCCATCTTCTCCGGCACAATCGGCCTCGCATCCCTTCTAGTCA
TGCGCGAAACCCACCCCAAGATTATCCTGGAACGAAAAGCAGCCCGTCTG
CGCAAAGCGACGGGGGACCCCCACCTACGCTCGAAGCTCTCCGACCCCAA
ACCCGCACCCCAACTCCTCTTACAAGCCCTAACTCGTCCCACGAAACTCC
TCTTCCGCTCCCCAATACTCCTTATTATCTCGATCTACATGGCCCTCATA
TTCGGCCTGATGTACCTCCTCTTTACTACTTTCACGGACGTCTTCGAGAC
GCAGTATGGCTTCTCCACGGCGACGTCGGGACTGGTCTATCTCGGTCTCG
GCGTATCGTTGGTAACGTGCATGTTCATCGCAAAGCCGCTGGGTGAGCGC
TTGACGGCGTATCATTCCGCGAAGAAAGCAGATGATGGTACCCAGCAACA
GCATCGAGCAGAATACCGTCTCCTCCCGATGATATATTTCTCCCCGTGCG
TGGCCATCGGACTATTTATTTACGGATGGACAGTGTACTACAAAGTGCAC
TGGATAGTGCCAATTATAGGGACGAGTGTTATTGGGTTTGGGTCGTTTTT
CGTGATGATGTCCGCACAGCTATATCTGATTGATCTGTTCGGGTCGAGTG
CATCAGCATCCGCGCTGGCTGCTAATAACGTGTTGCGGTTCATCTGCAGT
ACCTTTTTGCCATTGGCGGGACCGGCTATGTATCGGAGTCTGGGGTATGG
GTGGGGGAATACGCTGCTGGGATTCTTGGCGTTGGGGTTTTTGCCGGCGC
CGGTGGTGTTTTATAGGTATGGGGGCTGGATGCATGCGAGGATGGGAGGT
GGGATTGATCCTTGCAAGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR020846 |
| DBxref | InterPro:IPR011701 |
| DBxref | PFAM:PF00083 |
| DBxref | PFAM:PF07690 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:646773..648494 + |
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