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KJC3_000361-T1, KJC3_000361-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_000361-T1
Unique NameKJC3_000361-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:648588..652335-

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_000361-T1 ID=KJC3_000361-T1|Name=KJC3_000361-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3748bp|location=Sequence derived from alignment at ch1:648588..652335- (Aspergillus niger KJC3)
CTTGTCCGCCATCGCGCCCAGCATGGGCTCGCGCCTGCACGAGAACTCCA
GCGCGGTGCGCAAGCGCATCCAAAACCATCAATTTGACAATGAGGCCGGG
GAGGAATACGAGGCATCCGCCTTCGGGGGTTTCAGCGATTACATGCGCCG
TAAGAAAATCAAGCTGCAGAATCGCGATGCCGATATCCGCTCCTCTGCGG
CGGACTGCCCGCCCATCTTTCGCGGTGTGGTGGCGCACGTCAATGGCTAC
ACCCAACCCTCACTGCAGGACCTGCATCGCCTCATAGTGAGTCATGGCGG
GGGGTTTCTACAGTATTTAAGCGGCAAAACAGACGCTACCCACATTATTG
CCAGTGCCTTGACCCCCAAGAAACGCGAAGAGTTTCGCCGCTATCGCATC
GTCAAACCGGCATGGGTTGTCGAGAGTGTCAAGGCGGGTCGCATGCTACC
GTGGGACTCATTTCGGGTCGTTGATGAGGGTCAGTCCCAGAAGGTGCTCA
GGTTCGATGATGGCCGTATGGTCAGTCAGATGAATAGTCCGCGATCTGGC
TATCGCGAGCAGACTAATACCAGCTGGTACACTGCCCAACTTCAAGAGGC
TGCATCATCTGTTGAGAAGACAAATCCACAACGATCACCGCCTCCACGCT
CAGAGATGCCTAATAGAGAGGATGCGACACCTGATGACGGGTCCCAGTCG
GACTATAGCCAGTTTCCAAGTTTTGCCTCTTTGGATGAGATAAGCACGAC
TCCTAAGATACCGTCTTCCGGGGAAGTTCGAGCGGAGACACCAGATAAAC
TGTCACCAGTGGAGCATAAAGACGCTGAACCTAATACATACAAACTAGAA
GATGACCAACCTGAGGTGCCTCCAGCGCCACTCCCACTGTTACGGGAATC
TATCCCAGTGAAGCCAGAAATGACTTCCGAAGAGTACAACGCGCAGCTAC
TGTCAGATCCACACATGAGGAATTCCAGTGTTGCGAATCCCCAGTTCATC
CAGCAATTCTACAGTGAGTCGCGATTACATCACCTGTCAACGTGGAAGGC
CGATCTCAAAGCCCAGTTGCAGTCGGCAGCCAAGGAAAAGTCGCAGTCAC
AGCTGAAACGCAAGAAGCCAGCCCCCGGGGCTCGGAGGTACATTATGCAC
GTGGATTTCGATTGCTTCTTCGCAGCCGTGTCGACCTTGAAGCGCCCGGA
GCTACAGGGAAAGCCTGTCGCGGTGGCGCACGGCACAGGCTCGGGTTCGG
AGATCGCAAGTTGCAACTACGAGGCTCGAGCACATGGGATCAAGAACGGC
ATGTGGATGAAGGGTGCGCTGCAAACCTGCCCAGAGCTAAAGGTGGTACC
GTACGATTTTCCAGCATACGAAGAGGCCAGCCGGAAGTTTTACAGTGCCA
TTCTTTCGGTGGATGGTATCGTGCAGAGTGTCAGCATTGACGAGGCCCTG
GTAGATATCACTACGCAATGCCTGGAAGCTGGAGGCTCGGATGGTAGGGG
CATTTCGGAGGGGTCACTCTATAGGGAACAGGCCAGGGCTGATGAAATCG
CGGACGAGTTACGGGCCACTGTAAAGAAGGAGACAGGCTGCGCTGTTTCC
GTGGGTATTGGGGGTAATATCCTATTGGCCAAGGTCGCCCTACGGAAAGC
GAAGCCTGCAGGTCAATTCCAGCTCAAACCCGATGCGGTTCTTGATTTCA
TTGGTAATTTGACGGTTCAGGATCTTCCTGGAGTGGGCTATAGCCTGGGC
ACAAAGCTGGAGGATTTGGGGGTAAAACTCGTCAAGGATGTTCGAGACCT
TACCCGCGATAGACTCACGACCAGCCTTGGGCCTAAGACCGGAGTCAAGA
TTTGGGAATATGCCAGGGGTATTGACCGGACTGAAGTTGGCAATGAAGTT
CTGAGGAAGTCAGTCTCTGCCGAAGTCAATTGGGGTATTCGCTTCGTGAA
TCAGACCCAAGCTGAGGACTTTGTGCGGTCTCTGTGTCAGGAACTGCATC
GCAGACTGGTCGAGAATCTTGTAAAAGGCCAACAACTGACTCTCAAGGTC
ATGCGGAGAGCACTCGACGCGCCCTTAGAGCCAGTGAAACATCTGGGCCA
TGGCAAGTGCGATGTATTCAACAAGAGTGTGGTCCTTGGCGTGGCGACGG
ATGCAGCCGATATTCTGGGCAAGGAGGCAGTGGCCATGCTACGCAGCATG
AATCTATCACCTGGTGACTTGAGAGGGCTGGGCGTTCAGATGACCAAACT
CCAGCACCTCCAGACGAGCTCTCCCTCAAAGTCTGGCCAACGACAGCTCA
ATTTCAAGGCATCGCCGGTCCGCAAAAGCATCGAGCGTCAAGATCCTGAT
ATTCTAGACAGTCCTCAGAAGGGGGAGACTGAGTCGGTGAAGCCCGTCCC
TTCATTCAGTGAGAGTGGCCGGCCGCTCAATGTTTCGGGAACCCAATTCA
TCTTGCCGTCACAGACTGACCCCAAGGTCGTTGCCGAGCTGCCGAATGAT
ATCCGGTCGCGACTGATCGCTCAGGCCAGACCTCGAGCGGAGTCACGCTC
CGAGTCCCCGTGCCCTACCAGTCGCCCTCGGGCGCCTGCGCCTGCAGAAC
TTCCTCCCCAGTCCGAGCTCGACCCGGATACATTAGCCGCCTTACCAGAG
GATGTGCGCGCGGAGATTTTGGGCTACTACAGCCGGCCATCCTTAAGTCC
CGGTCCGCAACCCACGCCATCGCCAGCCGCTCCCTTGCCGCTGTCTCGGC
CATCCTCCGCCGGTGGCCTCATGATGCGGAAGCCCACTACTCCCCCGAAG
AAGCGACGAGGGCGGCCCAGCACCAAGTCAGTAGGCAATCCGGCCCTCAC
ACAAGCTCGGTTCATTCTTCCCAGAGCCACAGCTTCATCTCCAGCTCCCG
TTGAACGTCATTCGCCTGCACCCGAGCCAACGGATGTCTCAGCCGATTTT
CTCGCCGCGCTTCCGGAGGACATACGCCGTGAGGTGCTGCAGGAACAACA
ACGCGCAAAGATGTTACAGCGGCCAGGCGTCAACCCTGCCACGGCGCCGC
GAGCCGGTTCACCAATCGCCTCAGATTCGGCTGCAGTACCAACTACAGAT
CCCCCTGCAGCGCCAGAGAAACGGCTCGTCCTACCGCCACTTCCAGACAG
ACCGACTTTCACCTCCCAAAGGCTGACGAACATATCCGACCTCCGTGATG
CGATGAGTTCGTGGCACGAGGCGTTTAGCAGCGAGGGTCCCTTCGAAGAA
GATGTGCTCTCGCTTGGAAGGTATCTCAAGCGTGTCATTGTGGACGAGAA
AGATTTAGACAAGGCGACGTCTGTCCTATCATGGCTTGCGTGGCTGATAG
ACGATGAGCAGAATGCAAACAAGTCGGATGCATTCAAGACGCCAGACCCG
AGTGGCCGAACGGGCAGCAGCTCACAGACTGCAATGACATGGGAGGCAGC
GATGAAGAGTCTGCGGACAAGTGTTGATGAGGGGTGTGCAGAGCGAGGGT
TACCTCCTGTGGAACTGTGATGTAAATATTTCAGATGGCAGTGGGATCTT
CATCAAAGATACCTGTTGCGAGTGAATCAGCTCCCACCATTCTGAATGAA
ATTATGATAGGAAGCGTTCTAGTTGGATAGTGCACAGCAGGATCTGAATA
ATGCACATTGGATAATCGAACTACAAGATCTAGATGAAATATACTCTAGT
GTCATATCTAACTTGAACGCCACTTGAAAACCGAATCCTACCCTACAG
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Coding sequence (CDS) from alignment at ch1:648588..652335-

>KJC3_000361-T1 ID=KJC3_000361-T1|Name=KJC3_000361-T1|organism=Aspergillus niger KJC3|type=CDS|length=3498bp|location=Sequence derived from alignment at ch1:648588..652335- (Aspergillus niger KJC3)
ATGGGCTCGCGCCTGCACGAGAACTCCAGCGCGGTGCGCAAGCGCATCCA
AAACCATCAATTTGACAATGAGGCCGGGGAGGAATACGAGGCATCCGCCT
TCGGGGGTTTCAGCGATTACATGCGCCGTAAGAAAATCAAGCTGCAGAAT
CGCGATGCCGATATCCGCTCCTCTGCGGCGGACTGCCCGCCCATCTTTCG
CGGTGTGGTGGCGCACGTCAATGGCTACACCCAACCCTCACTGCAGGACC
TGCATCGCCTCATAGTGAGTCATGGCGGGGGGTTTCTACAGTATTTAAGC
GGCAAAACAGACGCTACCCACATTATTGCCAGTGCCTTGACCCCCAAGAA
ACGCGAAGAGTTTCGCCGCTATCGCATCGTCAAACCGGCATGGGTTGTCG
AGAGTGTCAAGGCGGGTCGCATGCTACCGTGGGACTCATTTCGGGTCGTT
GATGAGGGTCAGTCCCAGAAGGTGCTCAGGTTCGATGATGGCCGTATGGT
CAGTCAGATGAATAGTCCGCGATCTGGCTATCGCGAGCAGACTAATACCA
GCTGGTACACTGCCCAACTTCAAGAGGCTGCATCATCTGTTGAGAAGACA
AATCCACAACGATCACCGCCTCCACGCTCAGAGATGCCTAATAGAGAGGA
TGCGACACCTGATGACGGGTCCCAGTCGGACTATAGCCAGTTTCCAAGTT
TTGCCTCTTTGGATGAGATAAGCACGACTCCTAAGATACCGTCTTCCGGG
GAAGTTCGAGCGGAGACACCAGATAAACTGTCACCAGTGGAGCATAAAGA
CGCTGAACCTAATACATACAAACTAGAAGATGACCAACCTGAGGTGCCTC
CAGCGCCACTCCCACTGTTACGGGAATCTATCCCAGTGAAGCCAGAAATG
ACTTCCGAAGAGTACAACGCGCAGCTACTGTCAGATCCACACATGAGGAA
TTCCAGTGTTGCGAATCCCCAGTTCATCCAGCAATTCTACAGTGAGTCGC
GATTACATCACCTGTCAACGTGGAAGGCCGATCTCAAAGCCCAGTTGCAG
TCGGCAGCCAAGGAAAAGTCGCAGTCACAGCTGAAACGCAAGAAGCCAGC
CCCCGGGGCTCGGAGGTACATTATGCACGTGGATTTCGATTGCTTCTTCG
CAGCCGTGTCGACCTTGAAGCGCCCGGAGCTACAGGGAAAGCCTGTCGCG
GTGGCGCACGGCACAGGCTCGGGTTCGGAGATCGCAAGTTGCAACTACGA
GGCTCGAGCACATGGGATCAAGAACGGCATGTGGATGAAGGGTGCGCTGC
AAACCTGCCCAGAGCTAAAGGTGGTACCGTACGATTTTCCAGCATACGAA
GAGGCCAGCCGGAAGTTTTACAGTGCCATTCTTTCGGTGGATGGTATCGT
GCAGAGTGTCAGCATTGACGAGGCCCTGGTAGATATCACTACGCAATGCC
TGGAAGCTGGAGGCTCGGATGGTAGGGGCATTTCGGAGGGGTCACTCTAT
AGGGAACAGGCCAGGGCTGATGAAATCGCGGACGAGTTACGGGCCACTGT
AAAGAAGGAGACAGGCTGCGCTGTTTCCGTGGGTATTGGGGGTAATATCC
TATTGGCCAAGGTCGCCCTACGGAAAGCGAAGCCTGCAGGTCAATTCCAG
CTCAAACCCGATGCGGTTCTTGATTTCATTGGTAATTTGACGGTTCAGGA
TCTTCCTGGAGTGGGCTATAGCCTGGGCACAAAGCTGGAGGATTTGGGGG
TAAAACTCGTCAAGGATGTTCGAGACCTTACCCGCGATAGACTCACGACC
AGCCTTGGGCCTAAGACCGGAGTCAAGATTTGGGAATATGCCAGGGGTAT
TGACCGGACTGAAGTTGGCAATGAAGTTCTGAGGAAGTCAGTCTCTGCCG
AAGTCAATTGGGGTATTCGCTTCGTGAATCAGACCCAAGCTGAGGACTTT
GTGCGGTCTCTGTGTCAGGAACTGCATCGCAGACTGGTCGAGAATCTTGT
AAAAGGCCAACAACTGACTCTCAAGGTCATGCGGAGAGCACTCGACGCGC
CCTTAGAGCCAGTGAAACATCTGGGCCATGGCAAGTGCGATGTATTCAAC
AAGAGTGTGGTCCTTGGCGTGGCGACGGATGCAGCCGATATTCTGGGCAA
GGAGGCAGTGGCCATGCTACGCAGCATGAATCTATCACCTGGTGACTTGA
GAGGGCTGGGCGTTCAGATGACCAAACTCCAGCACCTCCAGACGAGCTCT
CCCTCAAAGTCTGGCCAACGACAGCTCAATTTCAAGGCATCGCCGGTCCG
CAAAAGCATCGAGCGTCAAGATCCTGATATTCTAGACAGTCCTCAGAAGG
GGGAGACTGAGTCGGTGAAGCCCGTCCCTTCATTCAGTGAGAGTGGCCGG
CCGCTCAATGTTTCGGGAACCCAATTCATCTTGCCGTCACAGACTGACCC
CAAGGTCGTTGCCGAGCTGCCGAATGATATCCGGTCGCGACTGATCGCTC
AGGCCAGACCTCGAGCGGAGTCACGCTCCGAGTCCCCGTGCCCTACCAGT
CGCCCTCGGGCGCCTGCGCCTGCAGAACTTCCTCCCCAGTCCGAGCTCGA
CCCGGATACATTAGCCGCCTTACCAGAGGATGTGCGCGCGGAGATTTTGG
GCTACTACAGCCGGCCATCCTTAAGTCCCGGTCCGCAACCCACGCCATCG
CCAGCCGCTCCCTTGCCGCTGTCTCGGCCATCCTCCGCCGGTGGCCTCAT
GATGCGGAAGCCCACTACTCCCCCGAAGAAGCGACGAGGGCGGCCCAGCA
CCAAGTCAGTAGGCAATCCGGCCCTCACACAAGCTCGGTTCATTCTTCCC
AGAGCCACAGCTTCATCTCCAGCTCCCGTTGAACGTCATTCGCCTGCACC
CGAGCCAACGGATGTCTCAGCCGATTTTCTCGCCGCGCTTCCGGAGGACA
TACGCCGTGAGGTGCTGCAGGAACAACAACGCGCAAAGATGTTACAGCGG
CCAGGCGTCAACCCTGCCACGGCGCCGCGAGCCGGTTCACCAATCGCCTC
AGATTCGGCTGCAGTACCAACTACAGATCCCCCTGCAGCGCCAGAGAAAC
GGCTCGTCCTACCGCCACTTCCAGACAGACCGACTTTCACCTCCCAAAGG
CTGACGAACATATCCGACCTCCGTGATGCGATGAGTTCGTGGCACGAGGC
GTTTAGCAGCGAGGGTCCCTTCGAAGAAGATGTGCTCTCGCTTGGAAGGT
ATCTCAAGCGTGTCATTGTGGACGAGAAAGATTTAGACAAGGCGACGTCT
GTCCTATCATGGCTTGCGTGGCTGATAGACGATGAGCAGAATGCAAACAA
GTCGGATGCATTCAAGACGCCAGACCCGAGTGGCCGAACGGGCAGCAGCT
CACAGACTGCAATGACATGGGAGGCAGCGATGAAGAGTCTGCGGACAAGT
GTTGATGAGGGGTGTGCAGAGCGAGGGTTACCTCCTGTGGAACTGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003684damaged DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006281DNA repair
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_000361KJC3_000361Aspergillus niger KJC3gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000361-T1.cdsKJC3_000361-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000361-T1.utr3p1KJC3_000361-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000361-T1.exon1KJC3_000361-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000361-T1.utr5p1KJC3_000361-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000361-T1KJC3_000361-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
NoteBUSCO:EOG092608WI
DBxrefInterPro:IPR043502
DBxrefInterPro:IPR031991
DBxrefInterPro:IPR038401
DBxrefInterPro:IPR024728
DBxrefInterPro:IPR025527
DBxrefInterPro:IPR001126
DBxrefInterPro:IPR043128
DBxrefInterPro:IPR036420
DBxrefInterPro:IPR017961
DBxrefInterPro:IPR036775
DBxrefInterPro:IPR001357
DBxrefPFAM:PF14377
DBxrefPFAM:PF16727
DBxrefPFAM:PF11798
DBxrefPFAM:PF11799
DBxrefPFAM:PF00817
DBxrefPFAM:PF16589
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:648588..652335 -
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