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KJC3_000367-T2, KJC3_000367-T2 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_000367-T2
Unique NameKJC3_000367-T2
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:666986..668872+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_000367-T2 ID=KJC3_000367-T2|Name=KJC3_000367-T2|organism=Aspergillus niger KJC3|type=mRNA|length=1887bp|location=Sequence derived from alignment at ch1:666986..668872+ (Aspergillus niger KJC3)
GTCCCATCATTCAGCCACGGCGGAATATTCCAAAGCATTGGAATCTTCAT
ATACTCACATCAACTATATACTGGGTTCCAGCTATCAAGCAGAACCTTTC
TTCTAAAGTAAAGGAGCAACATAGATATCACGTTGTTAGTAGAACCCCCT
CGAGGCAGATGACCTGTCTATCAATAATTCACTAGAGACTAAACAGGCTC
CCCAGGAAGTGCAATTGTGCGAAGATCATCTACTGAGAGCTCCCCTGTCT
TCATAAATCATGCATATGCTCAAATCCACTGCATCTTCCTCGCTGTCCCT
GGCGGAAGGCCATTACATCTATGCGATTACTCCCGCATCCCCGGAGTCGT
TCGCAGTGATATCATCGGATGATTCGCTTCGCGTATTTGACGCTAACAGG
CTCGACCATGCGACCGTCATCGCGGCGAGTGCTCATGAGGGCGTCACGTC
TCTAAAGACATATGATGCTAACCAGCAGGTGCTGGCCACGGCAGGAAGAG
ACAACAAGGTAAAGCTGTGGGATCTGCGCAGCGGCAAGAAGGGTGCTGTT
GTGGAGTTGGAGACATGTAAGCCCTCCCTCCCCCAGAAATTCCTCTCATA
TTGTCTCCTATATCTATGCACAACTCTCATGATTACCCAATGCTAACCTT
CCCAACAGCGAAACAAGCCCCCATATTATCTGTCGCCTGCTGCCCCGAAG
TCCACGGAGTCGCAGCCGGAACAGAGCTCGTTTCATACCAAGCCATCGTC
GCCTTCTGGTAAGCCAGCAGCTCACAATATGCGCACAAATCTCCCCACAA
AGTACTACAGTATAAATTCACGAGCTGCTAACTGACGCCCCAGGGACACA
AGATCCCCCGGCCAAACAAGCCTGCAATACGTGGAGAGCCACAACGACGA
CGTAACAGAGGTATAACCCAACCCAACCCAACCCAGATCTTCCATCCACA
CAAATGACCGACACCACTGACATAAAACCCCAGCTCCAATACCACCCCAC
CAATCCGACCCTCTTCCTCTCCGGCAGCACAGACGGTCTAGTAAACATCT
ACAACACAACCATCACCGACGAAGACGAGGCCTTGGTTCAAGTAATCAAC
CACGGCTCCGTGCACCACGCCGGATTCCTCAGCAACAACACCATCTACGC
ACTCAGCCATGACGAGGTATTCTCCGTGCACCCGGCGACTGACCCCGATG
ATGCGGCCCAGGAGCCAAGTCCCATTCAGTTCGGGGATTTGAGGCAGCCG
CTGGGGTGTGAGTATATTGCGCAGGTGTGTGTGGGAAGTCAGGGGGCGTA
TGTTGCTGGGGGAAACAAGGAGTATGTTTATCCCTTCCCCCACCTTTTCT
CTTTTGGATTTTGTTGTGGATGATGATGATGTTAACGAGTACTGTAACCT
GGTGTAGGGAGAACCGTCTTGATCTTATTCCGCTTGTTTCGGAGCCCTCG
TGGAGATTCGATCAGGAGAATCTGTGGAGGTTGCCTGGGGCGCATGGCGA
GGAGGTGGTAAGGTCGGTGTATCTTGATGAGAAGGTGTGTATCACTTCTG
AATATGATGTTTACGGGATTGATTGGATGGATGGAGCTGACGATAACAAC
TATAGTCGCACTCTGTGTTTACGTGCGGAGAGGATGGGGTTGTTCGTGCG
TGGAAGCCTGAGGGTGAGGGGCAGGGAGGTGCTCAGGCGGAAGAGGCTGC
GAAGGGATCCCGTAAGGAGAAAAAGAATAGGGAGAAGGGGAGGTTTAAGC
CGTACTAGATCGTTTTATTGAGAGGTGAAGGATGATTAGGGGATTATTTC
GTGTTAGAACGTTTCTGGTAGAAGTTTCATGGGAGTTCATCAGAAGCATC
TCGTATTTATTCGTGACGTAGGAGATGCAGCCACAAT
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Coding sequence (CDS) from alignment at ch1:666986..668872+

>KJC3_000367-T2 ID=KJC3_000367-T2|Name=KJC3_000367-T2|organism=Aspergillus niger KJC3|type=CDS|length=3456bp|location=Sequence derived from alignment at ch1:666986..668872+ (Aspergillus niger KJC3)
ATGCATATGCTCAAATCCACTGCATCTTCCTCGCTGTCCCTGGCGGAAGG
CCATTACATCTATGCGATTACTCCCGCATCCCCGGAGTCGTTCGCAGTGA
TATCATCGGATGATTCGCTTCGCGTATTTGACGCTAACAGGCTCGACCAT
GCGACCGTCATCGCGGCGAGTGCTCATGAGGGCGTCACGTCTCTAAAGAC
ATATGATGCTAACCAGCAGGTGCTGGCCACGGCAGGAAGAGACAACAAGG
TAAAGCTGTGGGATCTGCGCAGCGGCAAGAAGGGTGCTGTTGTGGAGTTG
GAGACATCGAAACAAGCCCCCATATTATCTGTCGCCTGCTGCCCCGAAGT
CCACGGAGTCGCAGCCGGAACAGAGCTCGTTTCATACCAAGCCATCGTCG
CCTTCTGGGACACAAGATCCCCCGGCCAAACAAGCCTGCAATACGTGGAG
AGCCACAACGACGACGTAACAGAGCTCCAATACCACCCCACCAATCCGAC
CCTCTTCCTCTCCGGCAGCACAGACGGTCTAGTAAACATCTACAACACAA
CCATCACCGACGAAGACGAGGCCTTGGTTCAAGTAATCAACCACGGCTCC
GTGCACCACGCCGGATTCCTCAGCAACAACACCATCTACGCACTCAGCCA
TGACGAGGTATTCTCCGTGCACCCGGCGACTGACCCCGATGATGCGGCCC
AGGAGCCAAGTCCCATTCAGTTCGGGGATTTGAGGCAGCCGCTGGGGTGT
GAGTATATTGCGCAGGTGTGTGTGGGAAGTCAGGGGGCGTATGTTGCTGG
GGGAAACAAGGAGTATGTTTATCCCTTCCCCCACCTTTTCTCTTTTGGAT
TTTGTTGTGGATGAATGCATATGCTCAAATCCACTGCATCTTCCTCGCTG
TCCCTGGCGGAAGGCCATTACATCTATGCGATTACTCCCGCATCCCCGGA
GTCGTTCGCAGTGATATCATCGGATGATTCGCTTCGCGTATTTGACGCTA
ACAGGCTCGACCATGCGACCGTCATCGCGGCGAGTGCTCATGAGGGCGTC
ACGTCTCTAAAGACATATGATGCTAACCAGCAGGTGCTGGCCACGGCAGG
AAGAGACAACAAGGTAAAGCTGTGGGATCTGCGCAGCGGCAAGAAGGGTG
CTGTTGTGGAGTTGGAGACATCGAAACAAGCCCCCATATTATCTGTCGCC
TGCTGCCCCGAAGTCCACGGAGTCGCAGCCGGAACAGAGCTCGTTTCATA
CCAAGCCATCGTCGCCTTCTGGGACACAAGATCCCCCGGCCAAACAAGCC
TGCAATACGTGGAGAGCCACAACGACGACGTAACAGAGCTCCAATACCAC
CCCACCAATCCGACCCTCTTCCTCTCCGGCAGCACAGACGGTCTAGTAAA
CATCTACAACACAACCATCACCGACGAAGACGAGGCCTTGGTTCAAGTAA
TCAACCACGGCTCCGTGCACCACGCCGGATTCCTCAGCAACAACACCATC
TACGCACTCAGCCATGACGAGGTATTCTCCGTGCACCCGGCGACTGACCC
CGATGATGCGGCCCAGGAGCCAAGTCCCATTCAGTTCGGGGATTTGAGGC
AGCCGCTGGGGTGTGAGTATATTGCGCAGGTGTGTGTGGGAAGTCAGGGG
GCGTATGTTGCTGGGGGAAACAAGGAGTATGTTTATCCCTTCCCCCACCT
TTTCTCTTTTGGATTTTGTTGTGGATGAATGCATATGCTCAAATCCACTG
CATCTTCCTCGCTGTCCCTGGCGGAAGGCCATTACATCTATGCGATTACT
CCCGCATCCCCGGAGTCGTTCGCAGTGATATCATCGGATGATTCGCTTCG
CGTATTTGACGCTAACAGGCTCGACCATGCGACCGTCATCGCGGCGAGTG
CTCATGAGGGCGTCACGTCTCTAAAGACATATGATGCTAACCAGCAGGTG
CTGGCCACGGCAGGAAGAGACAACAAGGTAAAGCTGTGGGATCTGCGCAG
CGGCAAGAAGGGTGCTGTTGTGGAGTTGGAGACATCGAAACAAGCCCCCA
TATTATCTGTCGCCTGCTGCCCCGAAGTCCACGGAGTCGCAGCCGGAACA
GAGCTCGTTTCATACCAAGCCATCGTCGCCTTCTGGGACACAAGATCCCC
CGGCCAAACAAGCCTGCAATACGTGGAGAGCCACAACGACGACGTAACAG
AGCTCCAATACCACCCCACCAATCCGACCCTCTTCCTCTCCGGCAGCACA
GACGGTCTAGTAAACATCTACAACACAACCATCACCGACGAAGACGAGGC
CTTGGTTCAAGTAATCAACCACGGCTCCGTGCACCACGCCGGATTCCTCA
GCAACAACACCATCTACGCACTCAGCCATGACGAGGTATTCTCCGTGCAC
CCGGCGACTGACCCCGATGATGCGGCCCAGGAGCCAAGTCCCATTCAGTT
CGGGGATTTGAGGCAGCCGCTGGGGTGTGAGTATATTGCGCAGGTGTGTG
TGGGAAGTCAGGGGGCGTATGTTGCTGGGGGAAACAAGGAGTATGTTTAT
CCCTTCCCCCACCTTTTCTCTTTTGGATTTTGTTGTGGATGAATGCATAT
GCTCAAATCCACTGCATCTTCCTCGCTGTCCCTGGCGGAAGGCCATTACA
TCTATGCGATTACTCCCGCATCCCCGGAGTCGTTCGCAGTGATATCATCG
GATGATTCGCTTCGCGTATTTGACGCTAACAGGCTCGACCATGCGACCGT
CATCGCGGCGAGTGCTCATGAGGGCGTCACGTCTCTAAAGACATATGATG
CTAACCAGCAGGTGCTGGCCACGGCAGGAAGAGACAACAAGGTAAAGCTG
TGGGATCTGCGCAGCGGCAAGAAGGGTGCTGTTGTGGAGTTGGAGACATC
GAAACAAGCCCCCATATTATCTGTCGCCTGCTGCCCCGAAGTCCACGGAG
TCGCAGCCGGAACAGAGCTCGTTTCATACCAAGCCATCGTCGCCTTCTGG
GACACAAGATCCCCCGGCCAAACAAGCCTGCAATACGTGGAGAGCCACAA
CGACGACGTAACAGAGCTCCAATACCACCCCACCAATCCGACCCTCTTCC
TCTCCGGCAGCACAGACGGTCTAGTAAACATCTACAACACAACCATCACC
GACGAAGACGAGGCCTTGGTTCAAGTAATCAACCACGGCTCCGTGCACCA
CGCCGGATTCCTCAGCAACAACACCATCTACGCACTCAGCCATGACGAGG
TATTCTCCGTGCACCCGGCGACTGACCCCGATGATGCGGCCCAGGAGCCA
AGTCCCATTCAGTTCGGGGATTTGAGGCAGCCGCTGGGGTGTGAGTATAT
TGCGCAGGTGTGTGTGGGAAGTCAGGGGGCGTATGTTGCTGGGGGAAACA
AGGAGTATGTTTATCCCTTCCCCCACCTTTTCTCTTTTGGATTTTGTTGT
GGATGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_000367KJC3_000367Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000367-T2KJC3_000367-T2-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000367-T2.utr5p1KJC3_000367-T2.utr5p1Aspergillus niger KJC3five_prime_UTR
KJC3_000367-T2.utr5p2KJC3_000367-T2.utr5p2Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000367-T2.exon1KJC3_000367-T2.exon1Aspergillus niger KJC3exon
KJC3_000367-T2.exon2KJC3_000367-T2.exon2Aspergillus niger KJC3exon
KJC3_000367-T2.exon3KJC3_000367-T2.exon3Aspergillus niger KJC3exon
KJC3_000367-T2.exon4KJC3_000367-T2.exon4Aspergillus niger KJC3exon
KJC3_000367-T2.exon5KJC3_000367-T2.exon5Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000367-T2.cdsKJC3_000367-T2.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000367-T2.utr3p1KJC3_000367-T2.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036322
DBxrefInterPro:IPR017986
DBxrefInterPro:IPR019775
DBxrefInterPro:IPR015943
DBxrefInterPro:IPR001680
DBxrefPFAM:PF00400
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:666986..668872 +
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