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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:678639..679969- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000372-T1 ID=KJC3_000372-T1|Name=KJC3_000372-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1331bp|location=Sequence derived from alignment at ch1:678639..679969- (Aspergillus niger KJC3)
GGGAAAAAATTTTGCATGTCCATCTATGTTGTGATAGGGCTTATCTATGT
TCCTGGATCAATGCCGAAAATTGAAAGAGAAGGATTTTACACTAGATGGT
GTCTTCTTTCAATTGTTTCAATCTCTACAAATTAGTCAGGCCGAGTAGAG
AGCCAGTGCATATCATTTACCATTACAAACAGGTGGAGTAGCATAATACC
CCTATTAAAGCACCCCGATTCTCTGGGGCAGGTCAAGCGGCGGTGGGGAT
GCAATCGGGATTAGACATTCCAGATTTTTATGGAGAAGCATACCCTACAA
TTAAGCTTAACGGTCACATATCCTGAACTCACTTCCTAGCCCATCCATCC
ACCCCGACGTTAATTCCAGCCAACAACAAGACTCACCTACCATGTCCACC
ACCAAGCCAGCCTGGTACGAAACCAGCGTCACGGCCATCGACCCCGCTGC
GCAGTCAATGCTAGAGAATTACAGCGGACTCACACCCGAAGAGATCATTC
CCCATGTCTTAGCCCTGGTAGGCACCCATACCCCCGAGGACTATCTCCAA
CCCAGGATGACATCCCCCTAACTCTAACCGAAACCACTTGAGTGAACAGC
GAGATGAAGCCTTCCGCATCTTCCCCTACCCCTGCATCGGCCAAATGCGC
TTCCTAAGCTGCCACCTCTCCCGCCTCCCCTTCTACCCACAGGTCCTGTC
CCGCCTGCGCGCCTCCCCAGACAATGGCTTCCTCGACGCCGGCTGCTGCG
TCGGCCAAGAGCTCCGACACTTAGTCTACGCGGCCTCGATCCCGCCCTCG
CAATTATACGGCTTCGATCTAGAACCCGGGTTCTTCGAGCTCGGGTACAA
GCTCTTCCGAGACAATACCGACTCGTTCCCCGCTACATTTGTGGGCGCGG
ATCTAGGTGTGTCGGACGAGGAGTGGGAGTCGGGCGAGATTGTGGGGACG
ATGAAGGGGAAGATTGATGTTGTTTGGGCCGGCTCGTTGCTGCATTTCTG
GGATTATGAGGGGCAGGTGCGTGGTGTGAAACGGTTGATTGGGTTGACGA
GGGGGCAGATCGGAACGGTGGTTTGTGGGAGGCAGATGGGGAGTACGGTA
GCCGGGGTGTATGATTTGAAGGGGTTCACGGAAGAGACGATGCTGCATTA
TAGGCATGATGTGGGGAGTTTGCAGGGCTTTTGGAAGGAGGTTGGGGAGA
AGTTGGGGATGAAGTGGGAGGTGCAGGCGGAGTTGGAGGTCGGGGAGACG
ACGCTGAAAATGAGGAATAAGGCGAGTTTTATGGATGATAATGCCAGGAT
TATTTGGTGGTGTGCTACGAGGGTGGAGTGA back to topCoding sequence (CDS) from alignment at ch1:678639..679969- >KJC3_000372-T1 ID=KJC3_000372-T1|Name=KJC3_000372-T1|organism=Aspergillus niger KJC3|type=CDS|length=1716bp|location=Sequence derived from alignment at ch1:678639..679969- (Aspergillus niger KJC3)
CGAGATGAAGCCTTCCGCATCTTCCCCTACCCCTGCATCGGCCAAATGCG
CTTCCTAAGCTGCCACCTCTCCCGCCTCCCCTTCTACCCACAGGTCCTGT
CCCGCCTGCGCGCCTCCCCAGACAATGGCTTCCTCGACGCCGGCTGCTGC
GTCGGCCAAGAGCTCCGACACTTAGTCTACGCGGCCTCGATCCCGCCCTC
GCAATTATACGGCTTCGATCTAGAACCCGGGTTCTTCGAGCTCGGGTACA
AGCTCTTCCGAGACAATACCGACTCGTTCCCCGCTACATTTGTGGGCGCG
GATCTAGGTGTGTCGGACGAGGAGTGGGAGTCGGGCGAGATTGTGGGGAC
GATGAAGGGGAAGATTGATGTTGTTTGGGCCGGCTCGTTGCTGCATTTCT
GGGATTATGAGGGGCAGGTGCGTGGTGTGAAACGGTTGATTGGGTTGACG
AGGGGGCAGATCGGAACGGTGGTTTGTGGGAGGCAGATGGGGAGTACGGT
AGCCGGGGTGTATGATTTGAAGGGGTTCACGGAAGAGACGATGCTGCATT
ATAGGCATGATGTGGGGAGTTTGCAGGGCTTTTGGAAGGAGGTTGGGGAG
AAGTTGGGGATGAAGTGGGAGGTGCAGGCGGAGTTGGAGGTCGGGGAGAC
GACGCTGAAAATGAGGAATAAGGCGAGTTTTATGGATGATAATGCCAGGA
TTATTTGGTGGTGTGCTACGAGGGTGGAGTGAATGTCCACCACCAAGCCA
GCCTGGTACGAAACCAGCGTCACGGCCATCGACCCCGCTGCGCAGTCAAT
GCTAGAGAATTACAGCGGACTCACACCCGAAGAGATCATTCCCCATGTCT
TAGCCCTGCGAGATGAAGCCTTCCGCATCTTCCCCTACCCCTGCATCGGC
CAAATGCGCTTCCTAAGCTGCCACCTCTCCCGCCTCCCCTTCTACCCACA
GGTCCTGTCCCGCCTGCGCGCCTCCCCAGACAATGGCTTCCTCGACGCCG
GCTGCTGCGTCGGCCAAGAGCTCCGACACTTAGTCTACGCGGCCTCGATC
CCGCCCTCGCAATTATACGGCTTCGATCTAGAACCCGGGTTCTTCGAGCT
CGGGTACAAGCTCTTCCGAGACAATACCGACTCGTTCCCCGCTACATTTG
TGGGCGCGGATCTAGGTGTGTCGGACGAGGAGTGGGAGTCGGGCGAGATT
GTGGGGACGATGAAGGGGAAGATTGATGTTGTTTGGGCCGGCTCGTTGCT
GCATTTCTGGGATTATGAGGGGCAGGTGCGTGGTGTGAAACGGTTGATTG
GGTTGACGAGGGGGCAGATCGGAACGGTGGTTTGTGGGAGGCAGATGGGG
AGTACGGTAGCCGGGGTGTATGATTTGAAGGGGTTCACGGAAGAGACGAT
GCTGCATTATAGGCATGATGTGGGGAGTTTGCAGGGCTTTTGGAAGGAGG
TTGGGGAGAAGTTGGGGATGAAGTGGGAGGTGCAGGCGGAGTTGGAGGTC
GGGGAGACGACGCTGAAAATGAGGAATAAGGCGAGTTTTATGGATGATAA
TGCCAGGATTATTTGGTGGTGTGCTACGAGGGTGGAGTGAATGTCCACCA
CCAAGCCAGCCTGGTACGAAACCAGCGTCACGGCCATCGACCCCGCTGCG
CAGTCAATGCTAGAGAATTACAGCGGACTCACACCCGAAGAGATCATTCC
CCATGTCTTAGCCCTG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000372-T1.utr5p1 | KJC3_000372-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR029063 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:678639..679969 - |
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