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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:680264..681284- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000373-T1 ID=KJC3_000373-T1|Name=KJC3_000373-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1021bp|location=Sequence derived from alignment at ch1:680264..681284- (Aspergillus niger KJC3)
CGACCTATTAACCTTATAGGCTAAGTGTCGAACAGTGCACAGGTCGCAGG
CTTCTCTATTTAACCCAACTCCTACCCAACAGTGAATTCAGCTACGTCCA
GCTCCAACGAACATCCCCATCATGCGTCTTGTCTCTGCCATTGCCGCCTT
CGCCGCGGTTGCTACTGCCGCGACCGCGGACACCGTCCCTCCTGAACTGG
CGAGCATTGGAGAGCCGTCGACGGTGTTGAATGTCACCTATTCTGTGGGG
TCGACTTCAGTCAGCTTCACCCCTGGCGAGTTCCTAAACGCGAGCGGTAT
GCACGACCGATACTCGATTCAGACTTGTTTGACTGACCAATACACCATCT
ATAGTCGCCGTGGACGCGCCGCAGCCGCATCTCCACGACATGGGGCTGAG
CAGCTCGGGTCCCTATCTGCTGCTGATGGTCGACCCGGACTACAACAAAA
CCACTCCCCCCTCGGTGATCTTGCACACCATCGTCGCCAACCTGACCACC
GCCGTCAACAGCTCCAGTGACGCTAATGTGCTGGCCTCCTACATCGCCCC
CACCCCCACGTCCGGCACCCACAACTACACCCTGTTCCTGTTCGACCAGC
CCTCCAACTTCAGCATCCCTAGTCGCTACGAATCCTTCATGCTGACTGTA
AAGGGTACGCCCGTGAACCGGGTCAACCTGCCGCTGGTCAGCTTCCTCAA
CCAGACTGGGCTGGGCTCGCCGGTCGCGGCCAATTACTTCCGCGTTACGG
CGCCGAATAACAGCTCCAGCTCCAGCTCGGGCGCATCCGGTTCCAGCACG
ACCACAAGCTCGGGCACCAGCACCAGCACTGGCGCTGCCGCTAGTGAGAC
TTCGAGTGGGGCGGGCCACAAGATGGCCGCGGGGAGTTATCTGGCCGGTG
CGCTGGCCTTGGTTGGTGTGGTGGTGGCCTCTGTTTGATCTGCTTGTTTG
TTTGAAGACAATTATGGTTCTGTAGAAAGGGAAAAATAAAAGAAAAAAAA
AATCAAACTAGCAAGTCGCGT back to topCoding sequence (CDS) from alignment at ch1:680264..681284- >KJC3_000373-T1 ID=KJC3_000373-T1|Name=KJC3_000373-T1|organism=Aspergillus niger KJC3|type=CDS|length=1518bp|location=Sequence derived from alignment at ch1:680264..681284- (Aspergillus niger KJC3)
TCGCCGTGGACGCGCCGCAGCCGCATCTCCACGACATGGGGCTGAGCAGC
TCGGGTCCCTATCTGCTGCTGATGGTCGACCCGGACTACAACAAAACCAC
TCCCCCCTCGGTGATCTTGCACACCATCGTCGCCAACCTGACCACCGCCG
TCAACAGCTCCAGTGACGCTAATGTGCTGGCCTCCTACATCGCCCCCACC
CCCACGTCCGGCACCCACAACTACACCCTGTTCCTGTTCGACCAGCCCTC
CAACTTCAGCATCCCTAGTCGCTACGAATCCTTCATGCTGACTGTAAAGG
GTACGCCCGTGAACCGGGTCAACCTGCCGCTGGTCAGCTTCCTCAACCAG
ACTGGGCTGGGCTCGCCGGTCGCGGCCAATTACTTCCGCGTTACGGCGCC
GAATAACAGCTCCAGCTCCAGCTCGGGCGCATCCGGTTCCAGCACGACCA
CAAGCTCGGGCACCAGCACCAGCACTGGCGCTGCCGCTAGTGAGACTTCG
AGTGGGGCGGGCCACAAGATGGCCGCGGGGAGTTATCTGGCCGGTGCGCT
GGCCTTGGTTGGTGTGGTGGTGGCCTCTGTTTGAATGCGTCTTGTCTCTG
CCATTGCCGCCTTCGCCGCGGTTGCTACTGCCGCGACCGCGGACACCGTC
CCTCCTGAACTGGCGAGCATTGGAGAGCCGTCGACGGTGTTGAATGTCAC
CTATTCTGTGGGGTCGACTTCAGTCAGCTTCACCCCTGGCGAGTTCCTAA
ACGCGAGCGTCGCCGTGGACGCGCCGCAGCCGCATCTCCACGACATGGGG
CTGAGCAGCTCGGGTCCCTATCTGCTGCTGATGGTCGACCCGGACTACAA
CAAAACCACTCCCCCCTCGGTGATCTTGCACACCATCGTCGCCAACCTGA
CCACCGCCGTCAACAGCTCCAGTGACGCTAATGTGCTGGCCTCCTACATC
GCCCCCACCCCCACGTCCGGCACCCACAACTACACCCTGTTCCTGTTCGA
CCAGCCCTCCAACTTCAGCATCCCTAGTCGCTACGAATCCTTCATGCTGA
CTGTAAAGGGTACGCCCGTGAACCGGGTCAACCTGCCGCTGGTCAGCTTC
CTCAACCAGACTGGGCTGGGCTCGCCGGTCGCGGCCAATTACTTCCGCGT
TACGGCGCCGAATAACAGCTCCAGCTCCAGCTCGGGCGCATCCGGTTCCA
GCACGACCACAAGCTCGGGCACCAGCACCAGCACTGGCGCTGCCGCTAGT
GAGACTTCGAGTGGGGCGGGCCACAAGATGGCCGCGGGGAGTTATCTGGC
CGGTGCGCTGGCCTTGGTTGGTGTGGTGGTGGCCTCTGTTTGAATGCGTC
TTGTCTCTGCCATTGCCGCCTTCGCCGCGGTTGCTACTGCCGCGACCGCG
GACACCGTCCCTCCTGAACTGGCGAGCATTGGAGAGCCGTCGACGGTGTT
GAATGTCACCTATTCTGTGGGGTCGACTTCAGTCAGCTTCACCCCTGGCG
AGTTCCTAAACGCGAGCG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000373-T1.utr3p1 | KJC3_000373-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000373-T1.utr5p1 | KJC3_000373-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-19) |
| DBxref | InterPro:IPR035810 |
| DBxref | InterPro:IPR008914 |
| DBxref | InterPro:IPR036610 |
| DBxref | PFAM:PF01161 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:680264..681284 - |
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