You are here

Home

KJC3_000379-T1, KJC3_000379-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_000379-T1
Unique NameKJC3_000379-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:694462..694958+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_000379-T1 ID=KJC3_000379-T1|Name=KJC3_000379-T1|organism=Aspergillus niger KJC3|type=mRNA|length=497bp|location=Sequence derived from alignment at ch1:694462..694958+ (Aspergillus niger KJC3)
ATGAAGTTCATCCTCCCCGCCGTTCTCTTCCTCGCCTCTGCCGTCTCCGC
GCAGAATGTCGTCCTCGACTACAGCGACGGTATCCCGCTGTGCTGCACCA
CCCACGACCTCGTCTCCGAGGCCGAAGACGAAGTCATTCAGCAGGTGACC
AGCGCTTTCGAGAGTGACGGCGGTGGTGCCTGGGATCTTGGTGAGGCCAT
TGCGGGTGAATGTAAGTGGACGCCATATTCTAAGCTGGGATGGATAGCAT
AATTGGGAATTGAAATTAACTGGATTGCAATTCATAGGCCAGACTGCATT
CCCCACTGGCTTCGCTGGTGGCAACCGCACCGACTGCCCCGAGGACCTGA
CTGCCATCTGGTGCAAGAAGCACGCTCCCTGGACCGTAAGTATTACAGCT
AATCTGAATATGGATGATTCAATGCTGATGCCATTCACAGTTGACCATCA
ACGGTACCTCGACCCCCCGTGATGCCCACGGCCAGTGCCACTACTAG
back to top

Coding sequence (CDS) from alignment at ch1:694462..694958+

>KJC3_000379-T1 ID=KJC3_000379-T1|Name=KJC3_000379-T1|organism=Aspergillus niger KJC3|type=CDS|length=1098bp|location=Sequence derived from alignment at ch1:694462..694958+ (Aspergillus niger KJC3)
ATGAAGTTCATCCTCCCCGCCGTTCTCTTCCTCGCCTCTGCCGTCTCCGC
GCAGAATGTCGTCCTCGACTACAGCGACGGTATCCCGCTGTGCTGCACCA
CCCACGACCTCGTCTCCGAGGCCGAAGACGAAGTCATTCAGCAGGTGACC
AGCGCTTTCGAGAGTGACGGCGGTGGTGCCTGGGATCTTGGTGAGGCCAT
TGCGGGTGAATGCCAGACTGCATTCCCCACTGGCTTCGCTGGTGGCAACC
GCACCGACTGCCCCGAGGACCTGACTGCCATCTGGTGCAAGAAGCACGCT
CCCTGGACCTTGACCATCAACGGTACCTCGACCCCCCGTGATGCCCACGG
CCAGTGCCACTACTAGATGAAGTTCATCCTCCCCGCCGTTCTCTTCCTCG
CCTCTGCCGTCTCCGCGCAGAATGTCGTCCTCGACTACAGCGACGGTATC
CCGCTGTGCTGCACCACCCACGACCTCGTCTCCGAGGCCGAAGACGAAGT
CATTCAGCAGGTGACCAGCGCTTTCGAGAGTGACGGCGGTGGTGCCTGGG
ATCTTGGTGAGGCCATTGCGGGTGAATGCCAGACTGCATTCCCCACTGGC
TTCGCTGGTGGCAACCGCACCGACTGCCCCGAGGACCTGACTGCCATCTG
GTGCAAGAAGCACGCTCCCTGGACCTTGACCATCAACGGTACCTCGACCC
CCCGTGATGCCCACGGCCAGTGCCACTACTAGATGAAGTTCATCCTCCCC
GCCGTTCTCTTCCTCGCCTCTGCCGTCTCCGCGCAGAATGTCGTCCTCGA
CTACAGCGACGGTATCCCGCTGTGCTGCACCACCCACGACCTCGTCTCCG
AGGCCGAAGACGAAGTCATTCAGCAGGTGACCAGCGCTTTCGAGAGTGAC
GGCGGTGGTGCCTGGGATCTTGGTGAGGCCATTGCGGGTGAATGCCAGAC
TGCATTCCCCACTGGCTTCGCTGGTGGCAACCGCACCGACTGCCCCGAGG
ACCTGACTGCCATCTGGTGCAAGAAGCACGCTCCCTGGACCTTGACCATC
AACGGTACCTCGACCCCCCGTGATGCCCACGGCCAGTGCCACTACTAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_000379KJC3_000379Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000379-T1.exon1KJC3_000379-T1.exon1Aspergillus niger KJC3exon
KJC3_000379-T1.exon2KJC3_000379-T1.exon2Aspergillus niger KJC3exon
KJC3_000379-T1.exon3KJC3_000379-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000379-T1.cdsKJC3_000379-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000379-T1KJC3_000379-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
NoteSECRETED:SignalP(1-17)
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:694462..694958 +
Powered by Drupal