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KJC3_000397-T1, KJC3_000397-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_000397-T1
Unique NameKJC3_000397-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:739974..741350-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_000397-T1 ID=KJC3_000397-T1|Name=KJC3_000397-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1377bp|location=Sequence derived from alignment at ch1:739974..741350- (Aspergillus niger KJC3)
CCAGCCCTTCGCTCGGTGAGACCTTCACTATTTATGGCCTGAACTGACCA
AGGTCAGGATTACACTGTATTTCGTGTATCCACAACAACAAACGAGCCGC
ACCACTTACTCTTTCATCCGCTAAGTGAGAAGAGTACGATGAAGCACGGC
AGTCATTTGATTGAGGCCTCGTTCATGCGTCACATTCGCACGACACTTAA
TCTGCCAATCGGAAAGGGCCAGGTGGCTGCCATGGCCTTGGATCGCGCCC
TTGAAGCCAAGCATGGCTTCTCTGGCGACGAGGCTCCTGTTGTGTACCTC
CCATTTACCCCGCAGTATAAGAGCCAATGCAAGTACAAGCCGTCAATTCA
ATTTAACGAGCAGACCAGTCATTTCACGTTCACTAGGGCTTCGGTCGACA
AAGCATTCGATCCTGTCGTGAGGTCAATCACCAATGCCATTTTGCACCAC
ATATCTGCGTGCAATGTGACCCAAGTCGTCCTCGTGGGTGGTTTCAGTCA
ATCAGTCTATTTGAGGAAGGAAGTCAAACGCCGCCTGCAAGACATTGATG
AGGCCGAACGGCCGACTCTGCGCCATCTAAAGGGCAACGATGCGTAGGTT
TCTTTCCCCTTGCCAGAACTGGCGGTGCTAACCTGAACATGGCAGTATCA
CTGCCGTAGCCTACGGGCTGGCGCTGCGTGGAAGTATGGTCTCTGCCCAC
ATGCAGTACCAGAGCATCTGGGGCTACGAATTGGCCGCACCCGTAATTGA
AATGCGGGCAACAGGGCTTGAACCCCCAAGAAAACATGCCTTTTGTGTGA
TTCACTCGGTACGGAGCGTTTTGACCCCATGTTAGGGTCAGTTTCTTTTT
CTGATCGTCTGTATTCTTACAGGGTCGAGCAATAAGACAAGAGGGAAGCG
TGCACTTGTGGCTCGCCGTGGAGGCTGGGCAATGTGTACAATCAGTCCTT
ATCCGCCGTTTCACGGAAATGCCAAACCGTCAGTCTCACGTCTCTGCCCA
AAGATAAATGGATCTGTGAGCTAATATCATCTAGGCGTCCAGGCGATTGG
TGAGCTCAAGCTCAACATCCCCGATAAAGCCCGTTGCGGGGTGTATTATC
CCCCGGATGCCGAAGCAATTTTTTGGTACGAGTGCTTGGCATCGTGGACG
GTTTACACCGACGTTCGTGACCGCATGAGGTGGAAGTTGAGCATTCGAAC
CGACAAAGAGTGGGAGGAGGTAAACACCGAGGACCATTTGGTAACGGATA
TGTCACCATGGCATTGAAGGAGCCTGATTGATTTCGCTATTTGCTTTGCT
TACATCGGTTCATACCTCGGTCTAGATGCGCTCTGTCTCTCTCTTTCATT
TTTCAAGTTTCACTTATCTTCTTAATG
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Coding sequence (CDS) from alignment at ch1:739974..741350-

>KJC3_000397-T1 ID=KJC3_000397-T1|Name=KJC3_000397-T1|organism=Aspergillus niger KJC3|type=CDS|length=3828bp|location=Sequence derived from alignment at ch1:739974..741350- (Aspergillus niger KJC3)
GCGTCCAGGCGATTGGTGAGCTCAAGCTCAACATCCCCGATAAAGCCCGT
TGCGGGGTGTATTATCCCCCGGATGCCGAAGCAATTTTTTGGTACGAGTG
CTTGGCATCGTGGACGGTTTACACCGACGTTCGTGACCGCATGAGGTGGA
AGTTGAGCATTCGAACCGACAAAGAGTGGGAGGAGGTAAACACCGAGGAC
CATTTGGTAACGGATATGTCACCATGGCATTGAGGTCGAGCAATAAGACA
AGAGGGAAGCGTGCACTTGTGGCTCGCCGTGGAGGCTGGGCAATGTGTAC
AATCAGTCCTTATCCGCCGTTTCACGGAAATGCCAAACCTATCACTGCCG
TAGCCTACGGGCTGGCGCTGCGTGGAAGTATGGTCTCTGCCCACATGCAG
TACCAGAGCATCTGGGGCTACGAATTGGCCGCACCCGTAATTGAAATGCG
GGCAACAGGGCTTGAACCCCCAAGAAAACATGCCTTTTGTGTGATTCACT
CGATGAAGCACGGCAGTCATTTGATTGAGGCCTCGTTCATGCGTCACATT
CGCACGACACTTAATCTGCCAATCGGAAAGGGCCAGGTGGCTGCCATGGC
CTTGGATCGCGCCCTTGAAGCCAAGCATGGCTTCTCTGGCGACGAGGCTC
CTGTTGTGTACCTCCCATTTACCCCGCAGTATAAGAGCCAATGCAAGTAC
AAGCCGTCAATTCAATTTAACGAGCAGACCAGTCATTTCACGTTCACTAG
GGCTTCGGTCGACAAAGCATTCGATCCTGTCGTGAGGTCAATCACCAATG
CCATTTTGCACCACATATCTGCGTGCAATGTGACCCAAGTCGTCCTCGTG
GGTGGTTTCAGTCAATCAGTCTATTTGAGGAAGGAAGTCAAACGCCGCCT
GCAAGACATTGATGAGGCCGAACGGCCGACTCTGCGCCATCTAAAGGGCA
ACGATGCGCGTCCAGGCGATTGGTGAGCTCAAGCTCAACATCCCCGATAA
AGCCCGTTGCGGGGTGTATTATCCCCCGGATGCCGAAGCAATTTTTTGGT
ACGAGTGCTTGGCATCGTGGACGGTTTACACCGACGTTCGTGACCGCATG
AGGTGGAAGTTGAGCATTCGAACCGACAAAGAGTGGGAGGAGGTAAACAC
CGAGGACCATTTGGTAACGGATATGTCACCATGGCATTGAGGTCGAGCAA
TAAGACAAGAGGGAAGCGTGCACTTGTGGCTCGCCGTGGAGGCTGGGCAA
TGTGTACAATCAGTCCTTATCCGCCGTTTCACGGAAATGCCAAACCTATC
ACTGCCGTAGCCTACGGGCTGGCGCTGCGTGGAAGTATGGTCTCTGCCCA
CATGCAGTACCAGAGCATCTGGGGCTACGAATTGGCCGCACCCGTAATTG
AAATGCGGGCAACAGGGCTTGAACCCCCAAGAAAACATGCCTTTTGTGTG
ATTCACTCGATGAAGCACGGCAGTCATTTGATTGAGGCCTCGTTCATGCG
TCACATTCGCACGACACTTAATCTGCCAATCGGAAAGGGCCAGGTGGCTG
CCATGGCCTTGGATCGCGCCCTTGAAGCCAAGCATGGCTTCTCTGGCGAC
GAGGCTCCTGTTGTGTACCTCCCATTTACCCCGCAGTATAAGAGCCAATG
CAAGTACAAGCCGTCAATTCAATTTAACGAGCAGACCAGTCATTTCACGT
TCACTAGGGCTTCGGTCGACAAAGCATTCGATCCTGTCGTGAGGTCAATC
ACCAATGCCATTTTGCACCACATATCTGCGTGCAATGTGACCCAAGTCGT
CCTCGTGGGTGGTTTCAGTCAATCAGTCTATTTGAGGAAGGAAGTCAAAC
GCCGCCTGCAAGACATTGATGAGGCCGAACGGCCGACTCTGCGCCATCTA
AAGGGCAACGATGCGCGTCCAGGCGATTGGTGAGCTCAAGCTCAACATCC
CCGATAAAGCCCGTTGCGGGGTGTATTATCCCCCGGATGCCGAAGCAATT
TTTTGGTACGAGTGCTTGGCATCGTGGACGGTTTACACCGACGTTCGTGA
CCGCATGAGGTGGAAGTTGAGCATTCGAACCGACAAAGAGTGGGAGGAGG
TAAACACCGAGGACCATTTGGTAACGGATATGTCACCATGGCATTGAGGT
CGAGCAATAAGACAAGAGGGAAGCGTGCACTTGTGGCTCGCCGTGGAGGC
TGGGCAATGTGTACAATCAGTCCTTATCCGCCGTTTCACGGAAATGCCAA
ACCTATCACTGCCGTAGCCTACGGGCTGGCGCTGCGTGGAAGTATGGTCT
CTGCCCACATGCAGTACCAGAGCATCTGGGGCTACGAATTGGCCGCACCC
GTAATTGAAATGCGGGCAACAGGGCTTGAACCCCCAAGAAAACATGCCTT
TTGTGTGATTCACTCGATGAAGCACGGCAGTCATTTGATTGAGGCCTCGT
TCATGCGTCACATTCGCACGACACTTAATCTGCCAATCGGAAAGGGCCAG
GTGGCTGCCATGGCCTTGGATCGCGCCCTTGAAGCCAAGCATGGCTTCTC
TGGCGACGAGGCTCCTGTTGTGTACCTCCCATTTACCCCGCAGTATAAGA
GCCAATGCAAGTACAAGCCGTCAATTCAATTTAACGAGCAGACCAGTCAT
TTCACGTTCACTAGGGCTTCGGTCGACAAAGCATTCGATCCTGTCGTGAG
GTCAATCACCAATGCCATTTTGCACCACATATCTGCGTGCAATGTGACCC
AAGTCGTCCTCGTGGGTGGTTTCAGTCAATCAGTCTATTTGAGGAAGGAA
GTCAAACGCCGCCTGCAAGACATTGATGAGGCCGAACGGCCGACTCTGCG
CCATCTAAAGGGCAACGATGCGCGTCCAGGCGATTGGTGAGCTCAAGCTC
AACATCCCCGATAAAGCCCGTTGCGGGGTGTATTATCCCCCGGATGCCGA
AGCAATTTTTTGGTACGAGTGCTTGGCATCGTGGACGGTTTACACCGACG
TTCGTGACCGCATGAGGTGGAAGTTGAGCATTCGAACCGACAAAGAGTGG
GAGGAGGTAAACACCGAGGACCATTTGGTAACGGATATGTCACCATGGCA
TTGAGGTCGAGCAATAAGACAAGAGGGAAGCGTGCACTTGTGGCTCGCCG
TGGAGGCTGGGCAATGTGTACAATCAGTCCTTATCCGCCGTTTCACGGAA
ATGCCAAACCTATCACTGCCGTAGCCTACGGGCTGGCGCTGCGTGGAAGT
ATGGTCTCTGCCCACATGCAGTACCAGAGCATCTGGGGCTACGAATTGGC
CGCACCCGTAATTGAAATGCGGGCAACAGGGCTTGAACCCCCAAGAAAAC
ATGCCTTTTGTGTGATTCACTCGATGAAGCACGGCAGTCATTTGATTGAG
GCCTCGTTCATGCGTCACATTCGCACGACACTTAATCTGCCAATCGGAAA
GGGCCAGGTGGCTGCCATGGCCTTGGATCGCGCCCTTGAAGCCAAGCATG
GCTTCTCTGGCGACGAGGCTCCTGTTGTGTACCTCCCATTTACCCCGCAG
TATAAGAGCCAATGCAAGTACAAGCCGTCAATTCAATTTAACGAGCAGAC
CAGTCATTTCACGTTCACTAGGGCTTCGGTCGACAAAGCATTCGATCCTG
TCGTGAGGTCAATCACCAATGCCATTTTGCACCACATATCTGCGTGCAAT
GTGACCCAAGTCGTCCTCGTGGGTGGTTTCAGTCAATCAGTCTATTTGAG
GAAGGAAGTCAAACGCCGCCTGCAAGACATTGATGAGGCCGAACGGCCGA
CTCTGCGCCATCTAAAGGGCAACGATGC
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_000397KJC3_000397Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000397-T1KJC3_000397-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000397-T1.cdsKJC3_000397-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000397-T1.utr3p1KJC3_000397-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000397-T1.exon4KJC3_000397-T1.exon4Aspergillus niger KJC3exon
KJC3_000397-T1.exon3KJC3_000397-T1.exon3Aspergillus niger KJC3exon
KJC3_000397-T1.exon2KJC3_000397-T1.exon2Aspergillus niger KJC3exon
KJC3_000397-T1.exon1KJC3_000397-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000397-T1.utr5p1KJC3_000397-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR043129
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:739974..741350 -
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