|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:739974..741350- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000397-T2 ID=KJC3_000397-T2|Name=KJC3_000397-T2|organism=Aspergillus niger KJC3|type=mRNA|length=1377bp|location=Sequence derived from alignment at ch1:739974..741350- (Aspergillus niger KJC3)
CCAGCCCTTCGCTCGGTGAGACCTTCACTATTTATGGCCTGAACTGACCA
AGGTCAGGATTACACTGTATTTCGTGTATCCACAACAACAAACGAGCCGC
ACCACTTACTCTTTCATCCGCTAAGTGAGAAGAGTACGATGAAGCACGGC
AGTCATTTGATTGAGGCCTCGTTCATGCGTCACATTCGCACGACACTTAA
TCTGCCAATCGGAAAGGGCCAGGTGGCTGCCATGGCCTTGGATCGCGCCC
TTGAAGCCAAGCATGGCTTCTCTGGCGACGAGGCTCCTGTTGTGTACCTC
CCATTTACCCCGCAGTATAAGAGCCAATGCAAGTACAAGCCGTCAATTCA
ATTTAACGAGCAGACCAGTCATTTCACGTTCACTAGGGCTTCGGTCGACA
AAGCATTCGATCCTGTCGTGAGGTCAATCACCAATGCCATTTTGCACCAC
ATATCTGCGTGCAATGTGACCCAAGTCGTCCTCGTGGGTGGTTTCAGTCA
ATCAGTCTATTTGAGGAAGGAAGTCAAACGCCGCCTGCAAGACATTGATG
AGGCCGAACGGCCGACTCTGCGCCATCTAAAGGGCAACGATGCGTAGGTT
TCTTTCCCCTTGCCAGAACTGGCGGTGCTAACCTGAACATGGCAGTATCA
CTGCCGTAGCCTACGGGCTGGCGCTGCGTGGAAGTATGGTCTCTGCCCAC
ATGCAGTACCAGAGCATCTGGGGCTACGAATTGGCCGCACCCGTAATTGA
AATGCGGGCAACAGGGCTTGAACCCCCAAGAAAACATGCCTTTTGTGTGA
TTCACTCGGTACGGAGCGTTTTGACCCCATGTTAGGGTCAGTTTCTTTTT
CTGATCGTCTGTATTCTTACAGGGTCGAGCAATAAGACAAGAGGGAAGCG
TGCACTTGTGGCTCGCCGTGGAGGCTGGGCAATGTGTACAATCAGTCCTT
ATCCGCCGTTTCACGGAAATGCCAAACCGTCAGTCTCACGTCTCTGCCCA
AAGATAAATGGATCTGTGAGCTAATATCATCTAGGCGTCCAGGCGATTGG
TGAGCTCAAGCTCAACATCCCCGATAAAGCCCGTTGCGGGGTGTATTATC
CCCCGGATGCCGAAGCAATTTTTTGGTACGAGTGCTTGGCATCGTGGACG
GTTTACACCGACGTTCGTGACCGCATGAGGTGGAAGTTGAGCATTCGAAC
CGACAAAGAGTGGGAGGAGGTAAACACCGAGGACCATTTGGTAACGGATA
TGTCACCATGGCATTGAAGGAGCCTGATTGATTTCGCTATTTGCTTTGCT
TACATCGGTTCATACCTCGGTCTAGATGCGCTCTGTCTCTCTCTTTCATT
TTTCAAGTTTCACTTATCTTCTTAATG back to topCoding sequence (CDS) from alignment at ch1:739974..741350- >KJC3_000397-T2 ID=KJC3_000397-T2|Name=KJC3_000397-T2|organism=Aspergillus niger KJC3|type=CDS|length=2259bp|location=Sequence derived from alignment at ch1:739974..741350- (Aspergillus niger KJC3)
GGTCGAGCAATAAGACAAGAGGGAAGCGTGCACTTGTGGCTCGCCGTGGA
GGCTGGGCAATGTGTACAATCAGTCCTTATCCGCCGTTTCACGGAAATGC
CAAACCGTCAGTCTCACGTCTCTGCCCAAAGATAATATCACTGCCGTAGC
CTACGGGCTGGCGCTGCGTGGAAGTATGGTCTCTGCCCACATGCAGTACC
AGAGCATCTGGGGCTACGAATTGGCCGCACCCGTAATTGAAATGCGGGCA
ACAGGGCTTGAACCCCCAAGAAAACATGCCTTTTGTGTGATTCACTCGAT
GAAGCACGGCAGTCATTTGATTGAGGCCTCGTTCATGCGTCACATTCGCA
CGACACTTAATCTGCCAATCGGAAAGGGCCAGGTGGCTGCCATGGCCTTG
GATCGCGCCCTTGAAGCCAAGCATGGCTTCTCTGGCGACGAGGCTCCTGT
TGTGTACCTCCCATTTACCCCGCAGTATAAGAGCCAATGCAAGTACAAGC
CGTCAATTCAATTTAACGAGCAGACCAGTCATTTCACGTTCACTAGGGCT
TCGGTCGACAAAGCATTCGATCCTGTCGTGAGGTCAATCACCAATGCCAT
TTTGCACCACATATCTGCGTGCAATGTGACCCAAGTCGTCCTCGTGGGTG
GTTTCAGTCAATCAGTCTATTTGAGGAAGGAAGTCAAACGCCGCCTGCAA
GACATTGATGAGGCCGAACGGCCGACTCTGCGCCATCTAAAGGGCAACGA
TGCGGTCGAGCAATAAGACAAGAGGGAAGCGTGCACTTGTGGCTCGCCGT
GGAGGCTGGGCAATGTGTACAATCAGTCCTTATCCGCCGTTTCACGGAAA
TGCCAAACCGTCAGTCTCACGTCTCTGCCCAAAGATAATATCACTGCCGT
AGCCTACGGGCTGGCGCTGCGTGGAAGTATGGTCTCTGCCCACATGCAGT
ACCAGAGCATCTGGGGCTACGAATTGGCCGCACCCGTAATTGAAATGCGG
GCAACAGGGCTTGAACCCCCAAGAAAACATGCCTTTTGTGTGATTCACTC
GATGAAGCACGGCAGTCATTTGATTGAGGCCTCGTTCATGCGTCACATTC
GCACGACACTTAATCTGCCAATCGGAAAGGGCCAGGTGGCTGCCATGGCC
TTGGATCGCGCCCTTGAAGCCAAGCATGGCTTCTCTGGCGACGAGGCTCC
TGTTGTGTACCTCCCATTTACCCCGCAGTATAAGAGCCAATGCAAGTACA
AGCCGTCAATTCAATTTAACGAGCAGACCAGTCATTTCACGTTCACTAGG
GCTTCGGTCGACAAAGCATTCGATCCTGTCGTGAGGTCAATCACCAATGC
CATTTTGCACCACATATCTGCGTGCAATGTGACCCAAGTCGTCCTCGTGG
GTGGTTTCAGTCAATCAGTCTATTTGAGGAAGGAAGTCAAACGCCGCCTG
CAAGACATTGATGAGGCCGAACGGCCGACTCTGCGCCATCTAAAGGGCAA
CGATGCGGTCGAGCAATAAGACAAGAGGGAAGCGTGCACTTGTGGCTCGC
CGTGGAGGCTGGGCAATGTGTACAATCAGTCCTTATCCGCCGTTTCACGG
AAATGCCAAACCGTCAGTCTCACGTCTCTGCCCAAAGATAATATCACTGC
CGTAGCCTACGGGCTGGCGCTGCGTGGAAGTATGGTCTCTGCCCACATGC
AGTACCAGAGCATCTGGGGCTACGAATTGGCCGCACCCGTAATTGAAATG
CGGGCAACAGGGCTTGAACCCCCAAGAAAACATGCCTTTTGTGTGATTCA
CTCGATGAAGCACGGCAGTCATTTGATTGAGGCCTCGTTCATGCGTCACA
TTCGCACGACACTTAATCTGCCAATCGGAAAGGGCCAGGTGGCTGCCATG
GCCTTGGATCGCGCCCTTGAAGCCAAGCATGGCTTCTCTGGCGACGAGGC
TCCTGTTGTGTACCTCCCATTTACCCCGCAGTATAAGAGCCAATGCAAGT
ACAAGCCGTCAATTCAATTTAACGAGCAGACCAGTCATTTCACGTTCACT
AGGGCTTCGGTCGACAAAGCATTCGATCCTGTCGTGAGGTCAATCACCAA
TGCCATTTTGCACCACATATCTGCGTGCAATGTGACCCAAGTCGTCCTCG
TGGGTGGTTTCAGTCAATCAGTCTATTTGAGGAAGGAAGTCAAACGCCGC
CTGCAAGACATTGATGAGGCCGAACGGCCGACTCTGCGCCATCTAAAGGG
CAACGATGC back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000397-T2.utr3p1 | KJC3_000397-T2.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000397-T2.utr5p1 | KJC3_000397-T2.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR043129 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:739974..741350 - |
|
