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KJC3_000416-T2, KJC3_000416-T2 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_000416-T2
Unique NameKJC3_000416-T2
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:792026..793408-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_000416-T2 ID=KJC3_000416-T2|Name=KJC3_000416-T2|organism=Aspergillus niger KJC3|type=mRNA|length=1383bp|location=Sequence derived from alignment at ch1:792026..793408- (Aspergillus niger KJC3)
CCGGCTTTAATTCAACCTCACTTCTAGAGACAAAATTTGCATCAATGCCA
TTAGCAAGCCATAAATCCACTCAATCCCCAAAAATGGAGCAACGAGATAA
GGAATCACATAATGGAGGAAGTGGCAAGGCCCCAGAAACCAAACAATTCC
AGCATTCGTGGCCTGAGGTGTGTGAACCATTCCCGTGCTCGGCGTACCTA
CTATAGACATCTGCATGTATCACGCCTCACCATTCTCTTGTTCTGAACGG
CGATGCTACGATTTATCTATGCAGGAACACTGTAGATGACTTACACTGTC
TATTATCAATATCAGATCTCTAAACAACATGATAACATTCTGTCGTCGCA
TCTGGAAATGCTGCACCAGGTGAAGAGTCAACTCCACTCACACGGAGAGG
AACTGCAATTGGTGTCCAGCATGGTTGATAAGACTAAGAGATTGATTGCT
CAGTTTGATATTCTTAAGAAACGAGTGGTAGGTCGTAGCTACTTCGTTCT
TTCCTACTTCTGTCCATGTTATGGTTAACCATTCTGGCAGGTGCCAAGTG
AGTTTTTCTAATGCTCCTCTGACGGGTATAGTACGGAAATACAGCCTAGT
ACAAAGAATAGTAACCACCAGTATAGAGCTCAATACAGCAGCTCCAGAGT
CGGACACTCGTTCGTCGGAATCCATGTCGACGTCAAGCAGTCGAAAGGAC
CTGAAAAAAGAACAACTTAAACGTCATGCACACCACATGCATGACTCGGA
AGAAGACGGAGGGACAACAGCAGGAGGGACAACAGCAGCGGAAGACCACG
ATCCCCTAACTGCAAGGTCTTTAGCTGTGCACTCTAGCAAACGAAAGCGT
ATCGACGAGTTTATTCCAGGAGCCGATGAAGACATAAGGAGCTTCTCCCC
CGTGTCAGTGGAGACCGAGGATATCTCAGAAGAGGTACAGCGAAGATTAA
GGATCAAGGAGGAACAACGCAAAAGGCGGGGCACCCCGAAAGCGGACAAG
CGCAAGAGGGACAGTCTGACATCTAACGGAAGTACATCTTCGGTCAGAAC
CGCGACGAAACATCCTAGGAAAAAGGCCCGAGTTGGGACAAAGTGGAATC
GTTAGCTGGTGATTAGTCCGGATCTATAACGCCAGGTTACCCCGGACTTA
CCCCAGACTTACCCGTACATTTCTCTTTTAATGTTCTGAGACACAGCTGG
GTGAGTCTAGCCCCTATTAATGGGCAAAGGCCAGGCAGGTCGAAATTGGC
AAGCAGGGGTCAACACATTTTTCAAACCTTCTTTTGACACATCCAGCCAT
TTGACCATACTATTGGCTAGCCCTATGTACTTTATGTAACCTTATTGTTA
GCGGAGGGGATAATAATAGCACGTTCCTGAGTG
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Coding sequence (CDS) from alignment at ch1:792026..793408-

>KJC3_000416-T2 ID=KJC3_000416-T2|Name=KJC3_000416-T2|organism=Aspergillus niger KJC3|type=CDS|length=2034bp|location=Sequence derived from alignment at ch1:792026..793408- (Aspergillus niger KJC3)
AGCTCAATACAGCAGCTCCAGAGTCGGACACTCGTTCGTCGGAATCCATG
TCGACGTCAAGCAGTCGAAAGGACCTGAAAAAAGAACAACTTAAACGTCA
TGCACACCACATGCATGACTCGGAAGAAGACGGAGGGACAACAGCAGGAG
GGACAACAGCAGCGGAAGACCACGATCCCCTAACTGCAAGGTCTTTAGCT
GTGCACTCTAGCAAACGAAAGCGTATCGACGAGTTTATTCCAGGAGCCGA
TGAAGACATAAGGAGCTTCTCCCCCGTGTCAGTGGAGACCGAGGATATCT
CAGAAGAGGTACAGCGAAGATTAAGGATCAAGGAGGAACAACGCAAAAGG
CGGGGCACCCCGAAAGCGGACAAGCGCAAGAGGGACAGTCTGACATCTAA
CGGAAGTACATCTTCGGTCAGAACCGCGACGAAACATCCTAGGAAAAAGG
CCCGAGTTGGGACAAAGTGGAATCGTTAGGTGCCAAATGACTTACACTGT
CTATTATCAATATCAGATCTCTAAACAACATGATAACATTCTGTCGTCGC
ATCTGGAAATGCTGCACCAGGTGAAGAGTCAACTCCACTCACACGGAGAG
GAACTGCAATTGGTGTCCAGCATGGTTGATAAGACTAAGAGATTGATTGC
TCAGTTTGATATTCTTAAGAAACGAGTGAGCTCAATACAGCAGCTCCAGA
GTCGGACACTCGTTCGTCGGAATCCATGTCGACGTCAAGCAGTCGAAAGG
ACCTGAAAAAAGAACAACTTAAACGTCATGCACACCACATGCATGACTCG
GAAGAAGACGGAGGGACAACAGCAGGAGGGACAACAGCAGCGGAAGACCA
CGATCCCCTAACTGCAAGGTCTTTAGCTGTGCACTCTAGCAAACGAAAGC
GTATCGACGAGTTTATTCCAGGAGCCGATGAAGACATAAGGAGCTTCTCC
CCCGTGTCAGTGGAGACCGAGGATATCTCAGAAGAGGTACAGCGAAGATT
AAGGATCAAGGAGGAACAACGCAAAAGGCGGGGCACCCCGAAAGCGGACA
AGCGCAAGAGGGACAGTCTGACATCTAACGGAAGTACATCTTCGGTCAGA
ACCGCGACGAAACATCCTAGGAAAAAGGCCCGAGTTGGGACAAAGTGGAA
TCGTTAGGTGCCAAATGACTTACACTGTCTATTATCAATATCAGATCTCT
AAACAACATGATAACATTCTGTCGTCGCATCTGGAAATGCTGCACCAGGT
GAAGAGTCAACTCCACTCACACGGAGAGGAACTGCAATTGGTGTCCAGCA
TGGTTGATAAGACTAAGAGATTGATTGCTCAGTTTGATATTCTTAAGAAA
CGAGTGAGCTCAATACAGCAGCTCCAGAGTCGGACACTCGTTCGTCGGAA
TCCATGTCGACGTCAAGCAGTCGAAAGGACCTGAAAAAAGAACAACTTAA
ACGTCATGCACACCACATGCATGACTCGGAAGAAGACGGAGGGACAACAG
CAGGAGGGACAACAGCAGCGGAAGACCACGATCCCCTAACTGCAAGGTCT
TTAGCTGTGCACTCTAGCAAACGAAAGCGTATCGACGAGTTTATTCCAGG
AGCCGATGAAGACATAAGGAGCTTCTCCCCCGTGTCAGTGGAGACCGAGG
ATATCTCAGAAGAGGTACAGCGAAGATTAAGGATCAAGGAGGAACAACGC
AAAAGGCGGGGCACCCCGAAAGCGGACAAGCGCAAGAGGGACAGTCTGAC
ATCTAACGGAAGTACATCTTCGGTCAGAACCGCGACGAAACATCCTAGGA
AAAAGGCCCGAGTTGGGACAAAGTGGAATCGTTAGGTGCCAAATGACTTA
CACTGTCTATTATCAATATCAGATCTCTAAACAACATGATAACATTCTGT
CGTCGCATCTGGAAATGCTGCACCAGGTGAAGAGTCAACTCCACTCACAC
GGAGAGGAACTGCAATTGGTGTCCAGCATGGTTGATAAGACTAAGAGATT
GATTGCTCAGTTTGATATTCTTAAGAAACGAGTG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_000416KJC3_000416Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000416-T2KJC3_000416-T2-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000416-T2.cdsKJC3_000416-T2.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000416-T2.utr3p1KJC3_000416-T2.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000416-T2.exon3KJC3_000416-T2.exon3Aspergillus niger KJC3exon
KJC3_000416-T2.exon2KJC3_000416-T2.exon2Aspergillus niger KJC3exon
KJC3_000416-T2.exon1KJC3_000416-T2.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000416-T2.utr5p1KJC3_000416-T2.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:792026..793408 -
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