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KJC3_000418-T1, KJC3_000418-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_000418-T1
Unique NameKJC3_000418-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:797058..798846+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_000418-T1 ID=KJC3_000418-T1|Name=KJC3_000418-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1789bp|location=Sequence derived from alignment at ch1:797058..798846+ (Aspergillus niger KJC3)
CTCTTATTCCTTCTTTGCGAACGTTCTCATGCATCACGGCATTTCTATGA
CCTAATATAGCGCAACATACAACAGACTATGGTTGCTTCGCTTAAGAGAA
AATTCTGGCTTAAGAAAATGGCGTGTTCTTGCAGGCCGTACATAACCTTC
GCGAGCCGCCGTCTTTTCTTCTACCTCTCGCTTTAACGTGTCTTCGAACA
ATCCCATCATTAAACTCAGAATTTATCTCAGTTTACTATGGCTGACGCTG
AGATTGGAAGTGGCGCCAAAGCGCCACTCAAACGAGTGTGGTACCGCACT
TCACTCTTCAATGCCTGCGTGATCGGCGCTGTGGGCTTCCTCGCCCCCGG
GCTATGGAACGCCATGAACTCCCTCGGAGCCGGAGGCGAGGAGAAGCCCT
TCCTGGTGAACGCCGCCAATGCACTTGTTTTCGGACTGATGGGTATTTTC
TGCATCTTCGGCGCGCCCATTGCCAACCGCATCGGACTGAAATGGGCCCT
TCTCCTCGGCGCCGCCGGCTACCCCGTCTACGCAGCCGGTCTCTACACCA
ACAACCGGTTCGGCAACGTCTGGCTTGTTCTGGTCGGTGCCGTGGCATGC
GGCATCTCCGCAGGACTCTTCTGGGCCAGTGAAGGCGCCATCGCCATTGG
ATACCCAGAGCCATCGAAACGAGCCCGATACCTCAATATCTGGGTATGGT
GGCGCACCCTCGGACCCATTATCGGGAATTCGATTGTCCTAGCCCTCAAC
ATCAAGAACCAGAACAAAGGAAGTGTGGGATACTCTACCTACATTGTCTT
TATTGTTCTACAATGTCTGGCTGTCCCCGTTGCGTTACTTCTCACCCCGC
CCGACAAAGTCCAACGCGCCGATGGCTCTCCAGTCATCCTTCGGGTCGAG
GACTCCTGGAAGGCAGAATTTCAAGCACTCTGGAAAACATGCAAAAACCG
CACCGTCATCCTTCTGCTCCCAATCTTCTGGGCTGTCTACTTCAATGAAT
ACTCGGGTAACTTCGAAACGTATTACTTTGGAGTGCGAGCTCGTGCGCTT
ATCGCGTTCCTCTCCGACTGGGTTACGATTCTCGCCTCGCAGATCATCTC
TCACTGGCTGGATTGGAAGCGTGTCGACGCTAAGAAACGTCTCACGTACG
GCTGGTACTGGGTGATCATTGTGCATGTGACGGCGTATATTCTTGGCTGG
GTCGTGCAGGAGCAATATACATCCGCCCATAAAAAGAACCCTGATTTGGG
GACAATGGATTATACCAGTCCTGGATTCGCTAAGGGCGCGTTTGTCCTCT
TCATGTGGACCTTTGCTCAGCAGACGGGCCAGAATTGGTTGTATTATTTG
GTGGGAAGCATGACGGATAATATCGCCGAGTTGACCAGGTTGACGGGTGT
GTTGCGCGGGCAGGAGAGTTTTGGTGAGGCAGTTTCTTATGGGCTGAACA
CGAGGGATTGGTATGGTGGACGGGTGCCCATGGCTGTGAATACTATTCTG
CTGGGTAAGTTGGGTCGAATACTTGAATCTCGAAAATTTACTAACTTTCA
TTTTCTAGGACTGTGTGTTATTCCGACATGGATCGTTGTGAGGAATCATA
ATATGGAACCGACAGGCGAAAGGGAATTGGAGGTGGATCAACGCCCCGTC
GTGGACGAGAAGGGGGTGGTTGATTTGGAGGTGAAGGAAACAGGAGTTCA
TTGATCTATTTATAGCAGATCAGATTAGATGAACGGAAGAAATGTCTTTG
GCTATACTATATCCACTAATTTGCAAAGCATTATTACCC
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Coding sequence (CDS) from alignment at ch1:797058..798846+

>KJC3_000418-T1 ID=KJC3_000418-T1|Name=KJC3_000418-T1|organism=Aspergillus niger KJC3|type=CDS|length=2826bp|location=Sequence derived from alignment at ch1:797058..798846+ (Aspergillus niger KJC3)
ATGGCTGACGCTGAGATTGGAAGTGGCGCCAAAGCGCCACTCAAACGAGT
GTGGTACCGCACTTCACTCTTCAATGCCTGCGTGATCGGCGCTGTGGGCT
TCCTCGCCCCCGGGCTATGGAACGCCATGAACTCCCTCGGAGCCGGAGGC
GAGGAGAAGCCCTTCCTGGTGAACGCCGCCAATGCACTTGTTTTCGGACT
GATGGGTATTTTCTGCATCTTCGGCGCGCCCATTGCCAACCGCATCGGAC
TGAAATGGGCCCTTCTCCTCGGCGCCGCCGGCTACCCCGTCTACGCAGCC
GGTCTCTACACCAACAACCGGTTCGGCAACGTCTGGCTTGTTCTGGTCGG
TGCCGTGGCATGCGGCATCTCCGCAGGACTCTTCTGGGCCAGTGAAGGCG
CCATCGCCATTGGATACCCAGAGCCATCGAAACGAGCCCGATACCTCAAT
ATCTGGGTATGGTGGCGCACCCTCGGACCCATTATCGGGAATTCGATTGT
CCTAGCCCTCAACATCAAGAACCAGAACAAAGGAAGTGTGGGATACTCTA
CCTACATTGTCTTTATTGTTCTACAATGTCTGGCTGTCCCCGTTGCGTTA
CTTCTCACCCCGCCCGACAAAGTCCAACGCGCCGATGGCTCTCCAGTCAT
CCTTCGGGTCGAGGACTCCTGGAAGGCAGAATTTCAAGCACTCTGGAAAA
CATGCAAAAACCGCACCGTCATCCTTCTGCTCCCAATCTTCTGGGCTGTC
TACTTCAATGAATACTCGGGTAACTTCGAAACGTATTACTTTGGAGTGCG
AGCTCGTGCGCTTATCGCGTTCCTCTCCGACTGGGTTACGATTCTCGCCT
CGCAGATCATCTCTCACTGGCTGGATTGGAAGCGTGTCGACGCTAAGAAA
CGTCTCACGTACGGCTGGTACTGGGTGATCATTGTGCATGTGACGGCGTA
TATTCTTGGCTGGGTCGTGCAGGAGCAATATACATCCGCCCATAAAAAGA
ACCCTGATTTGGGGACAATGGATTATACCAGTCCTGGATTCGCTAAGGGC
GCGTTTGTCCTCTTCATGTGGACCTTTGCTCAGCAGACGGGCCAGAATTG
GTTGTATTATTTGGTGGGAAGCATGACGGATAATATCGCCGAGTTGACCA
GGTTGACGGGTGTGTTGCGCGGGCAGGAGAGTTTTGGTGAGGCAGTTTCT
TATGGGCTGAACACGAGGGATTGGTATGGTGGACGGGTGCCCATGGCTGT
GAATACTATTCTGCTGGGACTGTGTGTTATTCCGACATGGATCGTTGTGA
GGAATCATAATATGGAACCGACAGGCGAAAGGGAATTGGAGGTGGATCAA
CGCCCCGTCGTGGACGAGAAGGGGGTGGTTGATTTGGAGGTGAAGGAAAC
AGGAGTTCATTGAATGGCTGACGCTGAGATTGGAAGTGGCGCCAAAGCGC
CACTCAAACGAGTGTGGTACCGCACTTCACTCTTCAATGCCTGCGTGATC
GGCGCTGTGGGCTTCCTCGCCCCCGGGCTATGGAACGCCATGAACTCCCT
CGGAGCCGGAGGCGAGGAGAAGCCCTTCCTGGTGAACGCCGCCAATGCAC
TTGTTTTCGGACTGATGGGTATTTTCTGCATCTTCGGCGCGCCCATTGCC
AACCGCATCGGACTGAAATGGGCCCTTCTCCTCGGCGCCGCCGGCTACCC
CGTCTACGCAGCCGGTCTCTACACCAACAACCGGTTCGGCAACGTCTGGC
TTGTTCTGGTCGGTGCCGTGGCATGCGGCATCTCCGCAGGACTCTTCTGG
GCCAGTGAAGGCGCCATCGCCATTGGATACCCAGAGCCATCGAAACGAGC
CCGATACCTCAATATCTGGGTATGGTGGCGCACCCTCGGACCCATTATCG
GGAATTCGATTGTCCTAGCCCTCAACATCAAGAACCAGAACAAAGGAAGT
GTGGGATACTCTACCTACATTGTCTTTATTGTTCTACAATGTCTGGCTGT
CCCCGTTGCGTTACTTCTCACCCCGCCCGACAAAGTCCAACGCGCCGATG
GCTCTCCAGTCATCCTTCGGGTCGAGGACTCCTGGAAGGCAGAATTTCAA
GCACTCTGGAAAACATGCAAAAACCGCACCGTCATCCTTCTGCTCCCAAT
CTTCTGGGCTGTCTACTTCAATGAATACTCGGGTAACTTCGAAACGTATT
ACTTTGGAGTGCGAGCTCGTGCGCTTATCGCGTTCCTCTCCGACTGGGTT
ACGATTCTCGCCTCGCAGATCATCTCTCACTGGCTGGATTGGAAGCGTGT
CGACGCTAAGAAACGTCTCACGTACGGCTGGTACTGGGTGATCATTGTGC
ATGTGACGGCGTATATTCTTGGCTGGGTCGTGCAGGAGCAATATACATCC
GCCCATAAAAAGAACCCTGATTTGGGGACAATGGATTATACCAGTCCTGG
ATTCGCTAAGGGCGCGTTTGTCCTCTTCATGTGGACCTTTGCTCAGCAGA
CGGGCCAGAATTGGTTGTATTATTTGGTGGGAAGCATGACGGATAATATC
GCCGAGTTGACCAGGTTGACGGGTGTGTTGCGCGGGCAGGAGAGTTTTGG
TGAGGCAGTTTCTTATGGGCTGAACACGAGGGATTGGTATGGTGGACGGG
TGCCCATGGCTGTGAATACTATTCTGCTGGGACTGTGTGTTATTCCGACA
TGGATCGTTGTGAGGAATCATAATATGGAACCGACAGGCGAAAGGGAATT
GGAGGTGGATCAACGCCCCGTCGTGGACGAGAAGGGGGTGGTTGATTTGG
AGGTGAAGGAAACAGGAGTTCATTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_000418KJC3_000418Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000418-T1.utr5p1KJC3_000418-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000418-T1.exon1KJC3_000418-T1.exon1Aspergillus niger KJC3exon
KJC3_000418-T1.exon2KJC3_000418-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000418-T1.cdsKJC3_000418-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000418-T1.utr3p1KJC3_000418-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000418-T1KJC3_000418-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR011701
DBxrefPFAM:PF05978
DBxrefPFAM:PF07690
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:797058..798846 +
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