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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:891572..893032+ Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000448-T1 ID=KJC3_000448-T1|Name=KJC3_000448-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1461bp|location=Sequence derived from alignment at ch1:891572..893032+ (Aspergillus niger KJC3)
ATGCAGCACCAATCCCAAACCTCTCAAGGCCACCATGCCATCGTGTTCGG
CTGTTCAGGCATCAACGGCTGGGCCCTGGTCAACCAGCTACTCAACAACT
ACCCAGCCCCAGGGACTTTCAGCAGAGTGACGGCGGTTGCGAACCGTGCG
TTCACGGCTGAGGAGGCCCAGTGGCCAACAGACGATCGTCTCCAGATTGT
CTCCGGCGTGGACCTCTTGGTGGGCGACGATGCAGCGCTGGAGAAGACCC
TGGCGGAGAAGATCTCCTCTGTCGAGACGATCAGCCACGTGTACTATGCT
GGTATGTAGTCCGCTTCCGTATCGCATGCATACCTTCTCTGTTAGTGCGG
CTAACCGTGCGTGTTTCAATATCTGTGCAGCATATCGTGCCAGCGATGTC
CCTGAGGAAGAATGTCGCCTGAACAAAGAGATGCTTCGAGCGGCTGTTCA
GACGCTAGAGAATCTCTCGCCCAAACTGTCTTTCGTTACTCTTATTACTG
GCACAAAGGTAGGTCACCTACATATCCATATCAGAAACACATAATTTTCC
ACGTGCATAAAGCTAACCACACTTGTATTATTCAACAGGCATACGGCGTC
TACCTCCTCGATAAATTCCCCTTCCGGAACCAAATACCCCTAAAAGAAGA
CCTTCCCCGCGTGCCAGCCGAATACGCCAAAGACCTCTTCTACTACCATG
AAGTCGACCTGTTGCAAGAGCTCAGTACCGGAAAGTCCTGGTCATGGTGT
GAAGTCCGTCCGGACGTGATAGTACGTCCTTACACCCCTTCCACCACCCC
TTTACCAAACATACTAAACAACAAAAACCATAGGTCGGCCTCGCCCCCTT
CGGCAACGCCAACTGCATGGCCCAAACAATGGGCATCTACCTCTCCCTGT
ACCGCGCCCTCGAAGGCCCCAACGCCCGCGTCCCCTTCCCCGGCAACAGC
ACAACCTGGACCCTCCAATCCACCGACTCCAACCAAGACATAATCGCGCG
CTTCTGTATCCACGCATCCCTCCAACCGCGTGAAAAAGTCCATACCCGAG
CGTTCAACATCGCCGACAGCGCACGCCCCGTGGCGTGGTCTGAGCGATGG
CCCATCCTGGCGTCGTATTTCGGGCTGGAAGGGGTGGGGCCTGAGGAGGG
AAGATCTCTGCATCCGACGGAGTATATCGATCGGAATTGGGAGGAGTTGA
AACGATTATGTAGCGAGAGGGAGGGGGTGAAAGAGGAGGTGATCTATCGC
AGCATGCATAATACGGGGGCCAGGATGGGGAGTCTGAGACTGATGGACTT
TGATCGCCCGTTTGATTTGGGGAGAGCGAGGGAGATTGGGTTCAGTGAGG
AGATGGATACGAGGACGTCATGGTTTGGGGCGTTTGAGAGGGTGAGGAGG
GCGGGGATTATGTTGTGATGATGAGGTTATATGATTTGGATATGTGCTGC
TGTTGTTGACG back to topCoding sequence (CDS) from alignment at ch1:891572..893032+ >KJC3_000448-T1 ID=KJC3_000448-T1|Name=KJC3_000448-T1|organism=Aspergillus niger KJC3|type=CDS|length=4788bp|location=Sequence derived from alignment at ch1:891572..893032+ (Aspergillus niger KJC3)
ATGCAGCACCAATCCCAAACCTCTCAAGGCCACCATGCCATCGTGTTCGG
CTGTTCAGGCATCAACGGCTGGGCCCTGGTCAACCAGCTACTCAACAACT
ACCCAGCCCCAGGGACTTTCAGCAGAGTGACGGCGGTTGCGAACCGTGCG
TTCACGGCTGAGGAGGCCCAGTGGCCAACAGACGATCGTCTCCAGATTGT
CTCCGGCGTGGACCTCTTGGTGGGCGACGATGCAGCGCTGGAGAAGACCC
TGGCGGAGAAGATCTCCTCTGTCGAGACGATCAGCCACGTGTACTATGCT
GCATATCGTGCCAGCGATGTCCCTGAGGAAGAATGTCGCCTGAACAAAGA
GATGCTTCGAGCGGCTGTTCAGACGCTAGAGAATCTCTCGCCCAAACTGT
CTTTCGTTACTCTTATTACTGGCACAAAGGCATACGGCGTCTACCTCCTC
GATAAATTCCCCTTCCGGAACCAAATACCCCTAAAAGAAGACCTTCCCCG
CGTGCCAGCCGAATACGCCAAAGACCTCTTCTACTACCATGAAGTCGACC
TGTTGCAAGAGCTCAGTACCGGAAAGTCCTGGTCATGGTGTGAAGTCCGT
CCGGACGTGATAGTCGGCCTCGCCCCCTTCGGCAACGCCAACTGCATGGC
CCAAACAATGGGCATCTACCTCTCCCTGTACCGCGCCCTCGAAGGCCCCA
ACGCCCGCGTCCCCTTCCCCGGCAACAGCACAACCTGGACCCTCCAATCC
ACCGACTCCAACCAAGACATAATCGCGCGCTTCTGTATCCACGCATCCCT
CCAACCGCGTGAAAAAGTCCATACCCGAGCGTTCAACATCGCCGACAGCG
CACGCCCCGTGGCGTGGTCTGAGCGATGGCCCATCCTGGCGTCGTATTTC
GGGCTGGAAGGGGTGGGGCCTGAGGAGGGAAGATCTCTGCATCCGACGGA
GTATATCGATCGGAATTGGGAGGAGTTGAAACGATTATGTAGCGAGAGGG
AGGGGGTGAAAGAGGAGGTGATCTATCGCAGCATGCATAATACGGGGGCC
AGGATGGGGAGTCTGAGACTGATGGACTTTGATCGCCCGTTTGATTTGGG
GAGAGCGAGGGAGATTGGGTTCAGTGAGGAGATGGATACGAGGACGTCAT
GGTTTGGGGCGTTTGAGAGGGTGAGGAGGGCGGGGATTATGTTGTGAATG
CAGCACCAATCCCAAACCTCTCAAGGCCACCATGCCATCGTGTTCGGCTG
TTCAGGCATCAACGGCTGGGCCCTGGTCAACCAGCTACTCAACAACTACC
CAGCCCCAGGGACTTTCAGCAGAGTGACGGCGGTTGCGAACCGTGCGTTC
ACGGCTGAGGAGGCCCAGTGGCCAACAGACGATCGTCTCCAGATTGTCTC
CGGCGTGGACCTCTTGGTGGGCGACGATGCAGCGCTGGAGAAGACCCTGG
CGGAGAAGATCTCCTCTGTCGAGACGATCAGCCACGTGTACTATGCTGCA
TATCGTGCCAGCGATGTCCCTGAGGAAGAATGTCGCCTGAACAAAGAGAT
GCTTCGAGCGGCTGTTCAGACGCTAGAGAATCTCTCGCCCAAACTGTCTT
TCGTTACTCTTATTACTGGCACAAAGGCATACGGCGTCTACCTCCTCGAT
AAATTCCCCTTCCGGAACCAAATACCCCTAAAAGAAGACCTTCCCCGCGT
GCCAGCCGAATACGCCAAAGACCTCTTCTACTACCATGAAGTCGACCTGT
TGCAAGAGCTCAGTACCGGAAAGTCCTGGTCATGGTGTGAAGTCCGTCCG
GACGTGATAGTCGGCCTCGCCCCCTTCGGCAACGCCAACTGCATGGCCCA
AACAATGGGCATCTACCTCTCCCTGTACCGCGCCCTCGAAGGCCCCAACG
CCCGCGTCCCCTTCCCCGGCAACAGCACAACCTGGACCCTCCAATCCACC
GACTCCAACCAAGACATAATCGCGCGCTTCTGTATCCACGCATCCCTCCA
ACCGCGTGAAAAAGTCCATACCCGAGCGTTCAACATCGCCGACAGCGCAC
GCCCCGTGGCGTGGTCTGAGCGATGGCCCATCCTGGCGTCGTATTTCGGG
CTGGAAGGGGTGGGGCCTGAGGAGGGAAGATCTCTGCATCCGACGGAGTA
TATCGATCGGAATTGGGAGGAGTTGAAACGATTATGTAGCGAGAGGGAGG
GGGTGAAAGAGGAGGTGATCTATCGCAGCATGCATAATACGGGGGCCAGG
ATGGGGAGTCTGAGACTGATGGACTTTGATCGCCCGTTTGATTTGGGGAG
AGCGAGGGAGATTGGGTTCAGTGAGGAGATGGATACGAGGACGTCATGGT
TTGGGGCGTTTGAGAGGGTGAGGAGGGCGGGGATTATGTTGTGAATGCAG
CACCAATCCCAAACCTCTCAAGGCCACCATGCCATCGTGTTCGGCTGTTC
AGGCATCAACGGCTGGGCCCTGGTCAACCAGCTACTCAACAACTACCCAG
CCCCAGGGACTTTCAGCAGAGTGACGGCGGTTGCGAACCGTGCGTTCACG
GCTGAGGAGGCCCAGTGGCCAACAGACGATCGTCTCCAGATTGTCTCCGG
CGTGGACCTCTTGGTGGGCGACGATGCAGCGCTGGAGAAGACCCTGGCGG
AGAAGATCTCCTCTGTCGAGACGATCAGCCACGTGTACTATGCTGCATAT
CGTGCCAGCGATGTCCCTGAGGAAGAATGTCGCCTGAACAAAGAGATGCT
TCGAGCGGCTGTTCAGACGCTAGAGAATCTCTCGCCCAAACTGTCTTTCG
TTACTCTTATTACTGGCACAAAGGCATACGGCGTCTACCTCCTCGATAAA
TTCCCCTTCCGGAACCAAATACCCCTAAAAGAAGACCTTCCCCGCGTGCC
AGCCGAATACGCCAAAGACCTCTTCTACTACCATGAAGTCGACCTGTTGC
AAGAGCTCAGTACCGGAAAGTCCTGGTCATGGTGTGAAGTCCGTCCGGAC
GTGATAGTCGGCCTCGCCCCCTTCGGCAACGCCAACTGCATGGCCCAAAC
AATGGGCATCTACCTCTCCCTGTACCGCGCCCTCGAAGGCCCCAACGCCC
GCGTCCCCTTCCCCGGCAACAGCACAACCTGGACCCTCCAATCCACCGAC
TCCAACCAAGACATAATCGCGCGCTTCTGTATCCACGCATCCCTCCAACC
GCGTGAAAAAGTCCATACCCGAGCGTTCAACATCGCCGACAGCGCACGCC
CCGTGGCGTGGTCTGAGCGATGGCCCATCCTGGCGTCGTATTTCGGGCTG
GAAGGGGTGGGGCCTGAGGAGGGAAGATCTCTGCATCCGACGGAGTATAT
CGATCGGAATTGGGAGGAGTTGAAACGATTATGTAGCGAGAGGGAGGGGG
TGAAAGAGGAGGTGATCTATCGCAGCATGCATAATACGGGGGCCAGGATG
GGGAGTCTGAGACTGATGGACTTTGATCGCCCGTTTGATTTGGGGAGAGC
GAGGGAGATTGGGTTCAGTGAGGAGATGGATACGAGGACGTCATGGTTTG
GGGCGTTTGAGAGGGTGAGGAGGGCGGGGATTATGTTGTGAATGCAGCAC
CAATCCCAAACCTCTCAAGGCCACCATGCCATCGTGTTCGGCTGTTCAGG
CATCAACGGCTGGGCCCTGGTCAACCAGCTACTCAACAACTACCCAGCCC
CAGGGACTTTCAGCAGAGTGACGGCGGTTGCGAACCGTGCGTTCACGGCT
GAGGAGGCCCAGTGGCCAACAGACGATCGTCTCCAGATTGTCTCCGGCGT
GGACCTCTTGGTGGGCGACGATGCAGCGCTGGAGAAGACCCTGGCGGAGA
AGATCTCCTCTGTCGAGACGATCAGCCACGTGTACTATGCTGCATATCGT
GCCAGCGATGTCCCTGAGGAAGAATGTCGCCTGAACAAAGAGATGCTTCG
AGCGGCTGTTCAGACGCTAGAGAATCTCTCGCCCAAACTGTCTTTCGTTA
CTCTTATTACTGGCACAAAGGCATACGGCGTCTACCTCCTCGATAAATTC
CCCTTCCGGAACCAAATACCCCTAAAAGAAGACCTTCCCCGCGTGCCAGC
CGAATACGCCAAAGACCTCTTCTACTACCATGAAGTCGACCTGTTGCAAG
AGCTCAGTACCGGAAAGTCCTGGTCATGGTGTGAAGTCCGTCCGGACGTG
ATAGTCGGCCTCGCCCCCTTCGGCAACGCCAACTGCATGGCCCAAACAAT
GGGCATCTACCTCTCCCTGTACCGCGCCCTCGAAGGCCCCAACGCCCGCG
TCCCCTTCCCCGGCAACAGCACAACCTGGACCCTCCAATCCACCGACTCC
AACCAAGACATAATCGCGCGCTTCTGTATCCACGCATCCCTCCAACCGCG
TGAAAAAGTCCATACCCGAGCGTTCAACATCGCCGACAGCGCACGCCCCG
TGGCGTGGTCTGAGCGATGGCCCATCCTGGCGTCGTATTTCGGGCTGGAA
GGGGTGGGGCCTGAGGAGGGAAGATCTCTGCATCCGACGGAGTATATCGA
TCGGAATTGGGAGGAGTTGAAACGATTATGTAGCGAGAGGGAGGGGGTGA
AAGAGGAGGTGATCTATCGCAGCATGCATAATACGGGGGCCAGGATGGGG
AGTCTGAGACTGATGGACTTTGATCGCCCGTTTGATTTGGGGAGAGCGAG
GGAGATTGGGTTCAGTGAGGAGATGGATACGAGGACGTCATGGTTTGGGG
CGTTTGAGAGGGTGAGGAGGGCGGGGATTATGTTGTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000448-T1.utr3p1 | KJC3_000448-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036291 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:891572..893032 + |
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