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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:897680..900251+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000450-T1 ID=KJC3_000450-T1|Name=KJC3_000450-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2572bp|location=Sequence derived from alignment at ch1:897680..900251+ (Aspergillus niger KJC3)
GTCCTCCCGTGTCTTGCAGACAGCCATTAGCCTGCCATAGCGGTGCGTGT
GGTAGCCTGACTTGGCGGGCTGCCATCGTGCATCTGGGTATGATGTTGTC
GCAACCACTATCTAGATACGTGAGCACCGAATATCATAATACAAACGTGG
TGGCAACCTAGGCAGCAAAGATACAGATCATACACAAAAAACCTGTTCTA
CTTCCTACGAGCATCGGAACCACCCCCGGAGATATGACCCATCTTCAATG
ACGATCGTGTCCCGGCTGCTATTCTTGTCGCCGAAGGCCACTCATTTGAC
AACGACTAACACCCTTTAGTGCAGTGTACTGCTTCTCAGTGGCACCCGCC
GATTAGCCGTGGAGCGATAGGTTCAACGACACATTTTCTGTATCAGATTC
GACAAGCGGAGTCGGCCAGTGCATCCGGACGCGATACCCACCACTTCAAG
ACCCCAAGATGTGGGCTACGAACCGTCACTGGAGTCCCCGATTCTTGGTC
GCTACTCGCGCGATAGCTTGCTTTTTCCATCCGTTCTTCCAGAGTCGCTA
GTCAACTCTTGGTACCGTCTGAAAATTTCCCTCACGGTTTCCCCTTTTTG
GGAAACGCCACTGTCCATCAGACTCCAGTTTCTCCAACATGCGAGCTTGA
CCCGGACCGCTTGGGATCGTCCAAGAATGAGTCCCGGAGCCCTGCCAGGG
GCATTTGATGCAGCGATGATCGCGATGGCGCACATGCGCCAGATTGCCTC
CCGTTTAAATCGCAACTCAATCTTTGACCCCTCGGAAGTTCCCCTTCTAG
AAATGACTGTCCTCTCTATGTAGGGTGTGTGCGGTGCATGAGGACTGCAT
CTGATGTGTTGCACTCGATAAATAGGCCTTGGACTTTCCCGATTTACTAC
CCAGCATTGTGCGTCTTGCCCTCATCTGTCCGTCCGGACTGTCAATATGG
CAACTACACAGGGCCCAGTGATTGCTGGCGTTGCGATCAGTTTTGCGGTC
CTGAGTTTTGTGACCATTTGCCTCCGGCTGTTTGCTCGAATCTATGTCTT
GAAGCGAATGGGCTTGGATGACTGTAAGTCAATATTGTCCTGCCCCCCTT
GGCTGCTGTCCGACCTGTGACTTACCTACTATTTCTCCTAGACTTGATTA
TTGGCGCCTGCGTAAGGGAATCGTTTCCGGATTGATGCAATTGAGCTGAC
CTCTCACCCAGCTTCTATCATGGGCGTTCACAGCAGTTACCATTGTTGGT
AAGACGATTCCTCCTGTCAGCGTCTGAAGGCAGAGACTGACCCTATACAG
CTGTCAAGCATGGCATGGGCCAGCACATGGCGGATGTGGATCAGAGTGGT
CTAATAACATACTCTTTTGTACGTCCCTTCAACCTCTTGAGCAGGATAAC
GTTGCTGATGATCATGATCAGGCCGTTTGGCTGAGTTCAATGTTCTACTT
GGCCGCCCTGGGCTTCGTCAAAACCTCCGTCTGCTGGTTCTACACCCGAC
TTGGCGACAAGCAACTCACGCGCATGTCTCTCGTCATGTTGTGCGTGGTG
GGTTGTCAGGCCACTTCCTTCGTCCTGACAGCTGCGTTTCAGTGCAATCC
CATCCCCCGCGCCTGGAACACTAGCATCCCCGGCCACTGCGTGACGATCA
ACGTCTTCTACCTCGCCAACGCGGCGCTGAACATTACTACCGATCTGATT
ACCTACTCACTTCCGATCCGTGTCATCCTAAAACTACACATGCCAAGGAA
ACAGAAGTTGGCCCTTGGTGGTATCCTCTGTCTTGGTCTATTGTAAGTAG
TACAATACCTGCTGTCATTCACCGATGTCTTGTCTAACGGTTACCTCCAG
CGCCTGCATATCCTCCATCATCCGAATCACCTATATCCCCGCGATGCTCA
CCTCCAGCGACTCCACCTACGCCATCAGCGGCGCCATGTACTGGTCCGCC
ATCGAGATCAACGTAGGCATCTTGGCCTCCTCCATCCCGTCCTTCAAAGC
CATCGCCTCTCGCTTCCTCCCCCGCTTGATCGGCGAATACAGCTCGAACC
GCGGCTATGGCGGATGGTCGAGCAGCAACATGAGAAAAGAGGAATCGGGC
TTCTCCAAGGGTCGCGAGCATCCATTCGATATGAGTATCCTGCAGACCCA
AGATGGGGATGCCATGACGGGCACGCAGATCGGGAGGAATAACAGCCAGG
AACGGATTATTGTCCCGGATGGGAAGATATACGCTCATACGGAAATCGAG
ACGAATGTCGAAGTCAGTACGGAGTATTATACGCGGGGGATGCAGTCGTT
TGATATTCCTCGGTCTGTCGGGACGCATAGTTCTTGATCGTGCCTTGGTC
CACTATACCCTTCTCTACGTTCTTTCATTGTTTCATCCTCCGTTGATTCT
ATTTCCTTGTGTATATTCATATACCCTTCTTTTTTGTCCTTCGTTCACTT
TCATTCCTTTCCTCAGAAGGAAGCTTCTATACTTCTACATCCCCCTTGTA
TATTTCTACTATTTCCTTAACGGCCCTTTCCCGAATATCATACGTGAATA
CCACTAGCATGACCCTGGCAAC back to topCoding sequence (CDS) from alignment at ch1:897680..900251+ >KJC3_000450-T1 ID=KJC3_000450-T1|Name=KJC3_000450-T1|organism=Aspergillus niger KJC3|type=CDS|length=6660bp|location=Sequence derived from alignment at ch1:897680..900251+ (Aspergillus niger KJC3)
ATGGCAACTACACAGGGCCCAGTGATTGCTGGCGTTGCGATCAGTTTTGC
GGTCCTGAGTTTTGTGACCATTTGCCTCCGGCTGTTTGCTCGAATCTATG
TCTTGAAGCGAATGGGCTTGGATGACTACTTGATTATTGGCGCCTGCCTT
CTATCATGGGCGTTCACAGCAGTTACCATTGTTGCTGTCAAGCATGGCAT
GGGCCAGCACATGGCGGATGTGGATCAGAGTGGTCTAATAACATACTCTT
TTGCCGTTTGGCTGAGTTCAATGTTCTACTTGGCCGCCCTGGGCTTCGTC
AAAACCTCCGTCTGCTGGTTCTACACCCGACTTGGCGACAAGCAACTCAC
GCGCATGTCTCTCGTCATGTTGTGCGTGGTGGGTTGTCAGGCCACTTCCT
TCGTCCTGACAGCTGCGTTTCAGTGCAATCCCATCCCCCGCGCCTGGAAC
ACTAGCATCCCCGGCCACTGCGTGACGATCAACGTCTTCTACCTCGCCAA
CGCGGCGCTGAACATTACTACCGATCTGATTACCTACTCACTTCCGATCC
GTGTCATCCTAAAACTACACATGCCAAGGAAACAGAAGTTGGCCCTTGGT
GGTATCCTCTGTCTTGGTCTATTCGCCTGCATATCCTCCATCATCCGAAT
CACCTATATCCCCGCGATGCTCACCTCCAGCGACTCCACCTACGCCATCA
GCGGCGCCATGTACTGGTCCGCCATCGAGATCAACGTAGGCATCTTGGCC
TCCTCCATCCCGTCCTTCAAAGCCATCGCCTCTCGCTTCCTCCCCCGCTT
GATCGGCGAATACAGCTCGAACCGCGGCTATGGCGGATGGTCGAGCAGCA
ACATGAGAAAAGAGGAATCGGGCTTCTCCAAGGGTCGCGAGCATCCATTC
GATATGAGTATCCTGCAGACCCAAGATGGGGATGCCATGACGGGCACGCA
GATCGGGAGGAATAACAGCCAGGAACGGATTATTGTCCCGGATGGGAAGA
TATACGCTCATACGGAAATCGAGACGAATGTCGAAGTCAGTACGGAGTAT
TATACGCGGGGGATGCAGTCGTTTGATATTCCTCGGTCTGTCGGGACGCA
TAGTTCTTGAATGGCAACTACACAGGGCCCAGTGATTGCTGGCGTTGCGA
TCAGTTTTGCGGTCCTGAGTTTTGTGACCATTTGCCTCCGGCTGTTTGCT
CGAATCTATGTCTTGAAGCGAATGGGCTTGGATGACTACTTGATTATTGG
CGCCTGCCTTCTATCATGGGCGTTCACAGCAGTTACCATTGTTGCTGTCA
AGCATGGCATGGGCCAGCACATGGCGGATGTGGATCAGAGTGGTCTAATA
ACATACTCTTTTGCCGTTTGGCTGAGTTCAATGTTCTACTTGGCCGCCCT
GGGCTTCGTCAAAACCTCCGTCTGCTGGTTCTACACCCGACTTGGCGACA
AGCAACTCACGCGCATGTCTCTCGTCATGTTGTGCGTGGTGGGTTGTCAG
GCCACTTCCTTCGTCCTGACAGCTGCGTTTCAGTGCAATCCCATCCCCCG
CGCCTGGAACACTAGCATCCCCGGCCACTGCGTGACGATCAACGTCTTCT
ACCTCGCCAACGCGGCGCTGAACATTACTACCGATCTGATTACCTACTCA
CTTCCGATCCGTGTCATCCTAAAACTACACATGCCAAGGAAACAGAAGTT
GGCCCTTGGTGGTATCCTCTGTCTTGGTCTATTCGCCTGCATATCCTCCA
TCATCCGAATCACCTATATCCCCGCGATGCTCACCTCCAGCGACTCCACC
TACGCCATCAGCGGCGCCATGTACTGGTCCGCCATCGAGATCAACGTAGG
CATCTTGGCCTCCTCCATCCCGTCCTTCAAAGCCATCGCCTCTCGCTTCC
TCCCCCGCTTGATCGGCGAATACAGCTCGAACCGCGGCTATGGCGGATGG
TCGAGCAGCAACATGAGAAAAGAGGAATCGGGCTTCTCCAAGGGTCGCGA
GCATCCATTCGATATGAGTATCCTGCAGACCCAAGATGGGGATGCCATGA
CGGGCACGCAGATCGGGAGGAATAACAGCCAGGAACGGATTATTGTCCCG
GATGGGAAGATATACGCTCATACGGAAATCGAGACGAATGTCGAAGTCAG
TACGGAGTATTATACGCGGGGGATGCAGTCGTTTGATATTCCTCGGTCTG
TCGGGACGCATAGTTCTTGAATGGCAACTACACAGGGCCCAGTGATTGCT
GGCGTTGCGATCAGTTTTGCGGTCCTGAGTTTTGTGACCATTTGCCTCCG
GCTGTTTGCTCGAATCTATGTCTTGAAGCGAATGGGCTTGGATGACTACT
TGATTATTGGCGCCTGCCTTCTATCATGGGCGTTCACAGCAGTTACCATT
GTTGCTGTCAAGCATGGCATGGGCCAGCACATGGCGGATGTGGATCAGAG
TGGTCTAATAACATACTCTTTTGCCGTTTGGCTGAGTTCAATGTTCTACT
TGGCCGCCCTGGGCTTCGTCAAAACCTCCGTCTGCTGGTTCTACACCCGA
CTTGGCGACAAGCAACTCACGCGCATGTCTCTCGTCATGTTGTGCGTGGT
GGGTTGTCAGGCCACTTCCTTCGTCCTGACAGCTGCGTTTCAGTGCAATC
CCATCCCCCGCGCCTGGAACACTAGCATCCCCGGCCACTGCGTGACGATC
AACGTCTTCTACCTCGCCAACGCGGCGCTGAACATTACTACCGATCTGAT
TACCTACTCACTTCCGATCCGTGTCATCCTAAAACTACACATGCCAAGGA
AACAGAAGTTGGCCCTTGGTGGTATCCTCTGTCTTGGTCTATTCGCCTGC
ATATCCTCCATCATCCGAATCACCTATATCCCCGCGATGCTCACCTCCAG
CGACTCCACCTACGCCATCAGCGGCGCCATGTACTGGTCCGCCATCGAGA
TCAACGTAGGCATCTTGGCCTCCTCCATCCCGTCCTTCAAAGCCATCGCC
TCTCGCTTCCTCCCCCGCTTGATCGGCGAATACAGCTCGAACCGCGGCTA
TGGCGGATGGTCGAGCAGCAACATGAGAAAAGAGGAATCGGGCTTCTCCA
AGGGTCGCGAGCATCCATTCGATATGAGTATCCTGCAGACCCAAGATGGG
GATGCCATGACGGGCACGCAGATCGGGAGGAATAACAGCCAGGAACGGAT
TATTGTCCCGGATGGGAAGATATACGCTCATACGGAAATCGAGACGAATG
TCGAAGTCAGTACGGAGTATTATACGCGGGGGATGCAGTCGTTTGATATT
CCTCGGTCTGTCGGGACGCATAGTTCTTGAATGGCAACTACACAGGGCCC
AGTGATTGCTGGCGTTGCGATCAGTTTTGCGGTCCTGAGTTTTGTGACCA
TTTGCCTCCGGCTGTTTGCTCGAATCTATGTCTTGAAGCGAATGGGCTTG
GATGACTACTTGATTATTGGCGCCTGCCTTCTATCATGGGCGTTCACAGC
AGTTACCATTGTTGCTGTCAAGCATGGCATGGGCCAGCACATGGCGGATG
TGGATCAGAGTGGTCTAATAACATACTCTTTTGCCGTTTGGCTGAGTTCA
ATGTTCTACTTGGCCGCCCTGGGCTTCGTCAAAACCTCCGTCTGCTGGTT
CTACACCCGACTTGGCGACAAGCAACTCACGCGCATGTCTCTCGTCATGT
TGTGCGTGGTGGGTTGTCAGGCCACTTCCTTCGTCCTGACAGCTGCGTTT
CAGTGCAATCCCATCCCCCGCGCCTGGAACACTAGCATCCCCGGCCACTG
CGTGACGATCAACGTCTTCTACCTCGCCAACGCGGCGCTGAACATTACTA
CCGATCTGATTACCTACTCACTTCCGATCCGTGTCATCCTAAAACTACAC
ATGCCAAGGAAACAGAAGTTGGCCCTTGGTGGTATCCTCTGTCTTGGTCT
ATTCGCCTGCATATCCTCCATCATCCGAATCACCTATATCCCCGCGATGC
TCACCTCCAGCGACTCCACCTACGCCATCAGCGGCGCCATGTACTGGTCC
GCCATCGAGATCAACGTAGGCATCTTGGCCTCCTCCATCCCGTCCTTCAA
AGCCATCGCCTCTCGCTTCCTCCCCCGCTTGATCGGCGAATACAGCTCGA
ACCGCGGCTATGGCGGATGGTCGAGCAGCAACATGAGAAAAGAGGAATCG
GGCTTCTCCAAGGGTCGCGAGCATCCATTCGATATGAGTATCCTGCAGAC
CCAAGATGGGGATGCCATGACGGGCACGCAGATCGGGAGGAATAACAGCC
AGGAACGGATTATTGTCCCGGATGGGAAGATATACGCTCATACGGAAATC
GAGACGAATGTCGAAGTCAGTACGGAGTATTATACGCGGGGGATGCAGTC
GTTTGATATTCCTCGGTCTGTCGGGACGCATAGTTCTTGAATGGCAACTA
CACAGGGCCCAGTGATTGCTGGCGTTGCGATCAGTTTTGCGGTCCTGAGT
TTTGTGACCATTTGCCTCCGGCTGTTTGCTCGAATCTATGTCTTGAAGCG
AATGGGCTTGGATGACTACTTGATTATTGGCGCCTGCCTTCTATCATGGG
CGTTCACAGCAGTTACCATTGTTGCTGTCAAGCATGGCATGGGCCAGCAC
ATGGCGGATGTGGATCAGAGTGGTCTAATAACATACTCTTTTGCCGTTTG
GCTGAGTTCAATGTTCTACTTGGCCGCCCTGGGCTTCGTCAAAACCTCCG
TCTGCTGGTTCTACACCCGACTTGGCGACAAGCAACTCACGCGCATGTCT
CTCGTCATGTTGTGCGTGGTGGGTTGTCAGGCCACTTCCTTCGTCCTGAC
AGCTGCGTTTCAGTGCAATCCCATCCCCCGCGCCTGGAACACTAGCATCC
CCGGCCACTGCGTGACGATCAACGTCTTCTACCTCGCCAACGCGGCGCTG
AACATTACTACCGATCTGATTACCTACTCACTTCCGATCCGTGTCATCCT
AAAACTACACATGCCAAGGAAACAGAAGTTGGCCCTTGGTGGTATCCTCT
GTCTTGGTCTATTCGCCTGCATATCCTCCATCATCCGAATCACCTATATC
CCCGCGATGCTCACCTCCAGCGACTCCACCTACGCCATCAGCGGCGCCAT
GTACTGGTCCGCCATCGAGATCAACGTAGGCATCTTGGCCTCCTCCATCC
CGTCCTTCAAAGCCATCGCCTCTCGCTTCCTCCCCCGCTTGATCGGCGAA
TACAGCTCGAACCGCGGCTATGGCGGATGGTCGAGCAGCAACATGAGAAA
AGAGGAATCGGGCTTCTCCAAGGGTCGCGAGCATCCATTCGATATGAGTA
TCCTGCAGACCCAAGATGGGGATGCCATGACGGGCACGCAGATCGGGAGG
AATAACAGCCAGGAACGGATTATTGTCCCGGATGGGAAGATATACGCTCA
TACGGAAATCGAGACGAATGTCGAAGTCAGTACGGAGTATTATACGCGGG
GGATGCAGTCGTTTGATATTCCTCGGTCTGTCGGGACGCATAGTTCTTGA
ATGGCAACTACACAGGGCCCAGTGATTGCTGGCGTTGCGATCAGTTTTGC
GGTCCTGAGTTTTGTGACCATTTGCCTCCGGCTGTTTGCTCGAATCTATG
TCTTGAAGCGAATGGGCTTGGATGACTACTTGATTATTGGCGCCTGCCTT
CTATCATGGGCGTTCACAGCAGTTACCATTGTTGCTGTCAAGCATGGCAT
GGGCCAGCACATGGCGGATGTGGATCAGAGTGGTCTAATAACATACTCTT
TTGCCGTTTGGCTGAGTTCAATGTTCTACTTGGCCGCCCTGGGCTTCGTC
AAAACCTCCGTCTGCTGGTTCTACACCCGACTTGGCGACAAGCAACTCAC
GCGCATGTCTCTCGTCATGTTGTGCGTGGTGGGTTGTCAGGCCACTTCCT
TCGTCCTGACAGCTGCGTTTCAGTGCAATCCCATCCCCCGCGCCTGGAAC
ACTAGCATCCCCGGCCACTGCGTGACGATCAACGTCTTCTACCTCGCCAA
CGCGGCGCTGAACATTACTACCGATCTGATTACCTACTCACTTCCGATCC
GTGTCATCCTAAAACTACACATGCCAAGGAAACAGAAGTTGGCCCTTGGT
GGTATCCTCTGTCTTGGTCTATTCGCCTGCATATCCTCCATCATCCGAAT
CACCTATATCCCCGCGATGCTCACCTCCAGCGACTCCACCTACGCCATCA
GCGGCGCCATGTACTGGTCCGCCATCGAGATCAACGTAGGCATCTTGGCC
TCCTCCATCCCGTCCTTCAAAGCCATCGCCTCTCGCTTCCTCCCCCGCTT
GATCGGCGAATACAGCTCGAACCGCGGCTATGGCGGATGGTCGAGCAGCA
ACATGAGAAAAGAGGAATCGGGCTTCTCCAAGGGTCGCGAGCATCCATTC
GATATGAGTATCCTGCAGACCCAAGATGGGGATGCCATGACGGGCACGCA
GATCGGGAGGAATAACAGCCAGGAACGGATTATTGTCCCGGATGGGAAGA
TATACGCTCATACGGAAATCGAGACGAATGTCGAAGTCAGTACGGAGTAT
TATACGCGGGGGATGCAGTCGTTTGATATTCCTCGGTCTGTCGGGACGCA
TAGTTCTTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000450-T1.utr5p1 | KJC3_000450-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000450-T1.utr3p1 | KJC3_000450-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:897680..900251 + |
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