You are here

Home

KJC3_000458-T1, KJC3_000458-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_000458-T1
Unique NameKJC3_000458-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:916066..919174+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_000458-T1 ID=KJC3_000458-T1|Name=KJC3_000458-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3109bp|location=Sequence derived from alignment at ch1:916066..919174+ (Aspergillus niger KJC3)
GTGGATCTCATCCCATTCTTCCCGGCTTCCCTCCCCCGTCATGAGCCCTT
TTTGGTACATAACCCTTCCTTGACTGATAGGACAAGCACGAGTTTTGAGA
GCATGGAATGATGGGCCTGGCCAAGCCATCCTCTTTCTTGCCCCCTCGAT
GTTCACTGAGGGTCACATCACCTTGGCCATCCCAGACATCATTGGGCTCT
CTCCCCCTCCGCCGGAAGGGTCGTCGGACCAAGTGGATCTTCGCCCGCTA
GTTAGTGAGTCTGTTAACCCGTTCTCGACTTCTCTCCGCATCTCAATCTC
CACAGCCCATTCCATCATCCCCGGCTAGCATCTCCCACCGTTGGAACACT
ACTGCATCCCCTCGTACGACCAATTCCTTCCAAACTATGGCCTGTTCAGC
TGGTAATAATGCAATTAGCCTAATCGGCTAAATCTCGGGGCGATGACTAT
TTAAATCGTCATCGAAGACATCTTGATAGCACTGAGCACTTGCCCCTGCA
TTGACGGAACGCGGGCGTCAATTCTTTTGGCCGTATCATGAATTCCAAAT
AGAAGGCCCAAACATGTACTTCTCTTCCTTCTTGGCCCTAGGGGCCTTGG
TTCAGGCTGCAGCAGCAACCTATTTTGCCCCCAACTCTACCGGTCTTCGT
ATCCAGCATGGTTTTGAGACGATTCTTATCCAGCCATTTGGGTACGACGG
ATTCCGTGTGCGCGCATGGCCCTTCCGTCCGCCTTCGGGTAACGAGATCA
GCTTCATCTACGATCCCCCGATCGAAGGCTATGAGGACACTGCGCATGGC
ATGAGCTATGACACCGCAACCACCGGCACGGAGCCTCGCACCTTGCGCAA
CGGCAATATCATCCTGCGCACCACCGGCTGGGGTGGTACCACAGCCGGAT
ACCGACTGTCCTTTTATCGCGTCAATGACGATGGAAGTGAGACCCTTCTC
ACAAACGAATATGCTCCGCTGAAGTCTCTCAACCCCCGGTACTATTACTG
GCCGGGACCTGGGGCCGAATTCTCAGCTGAGTTCTCTTTCAGTGCGACTC
CGGATGAGCAGATCTATGGTACGGGCACGCAACAGGATCATATGATCAAC
AAGAAGGGCTCCGTAATTGACATGGTCAACTTCAACTCCTACATCCCTAC
CCCGGTCTTCATGAGCAATAAAGGCTATGCCTTCATCTGGAACATGCCAG
CTGAGGGGCGTATGGAATTTGGCACCCTCCGGACCAGATTCACCGCCGCG
TCCACGACGCTTGTTGACTATGTAATCGTCGCCGCGCAGCCGGGCGACTA
CGACACCTTGCAGCAGCGGATTTCGGCCCTCACAGGACGGGCCCCGGCCC
CGCCTGACTTCTCGCTTGGATACATCCAGTCCAAGCTACGATATGAAAAC
CAAACGGAGGTGGAGCTGCTGGCTCAAAACTTCCATGACCGAAACATCCC
GGTGTCCATGATCGTTATTGACTACCAGTCCTGGGCTCACCAGGGTGATT
GGGCGCTCGATCCTCGCCTGTGGCCCAATGTTGCGCAGATGTCGGCGCGG
GTCAAGAACCTCACCGGCGCCGAAATGATGGCATCGCTATGGCCCAGTGT
TGCCGACGACAGCGTCAATTACGCAGCCCTGCAGGCGAACGGCCTTCTCT
CGGCCACGCGCGATGGACCTGGTACCACTGACTCCTGGAACGGATCATAC
ATCCGGAACTATGACTCCACCAACCCCTCGGCGCGGAAGTTCCTCTGGAG
CATGCTGAAGAAGAACTACTACGACAAGGGTATCAAAAACTTTTGGATTG
ACCAAGCCGATGGCGGAGCGCTGGGTGAGGCGTATGAGAACAACGGACAG
AGCACGTATATTGAGTCCATCCCGTTCACCCTGCCAAACGTGAACTATGC
CGCTGGTACGCAGCTCAGCGTGGGTAAGCTGTACCCCTGGGCGCATCAGC
AGGCAATTGAGGAGGGGTTCCGCAATGCAACAGATACCAAGGAAGGGAGC
GCATGCGATCATGTCTCCCTGAGTCGGTCTGGATACATCGGATCCCAGCG
GTTCTGCAGCATGATCTGGTCGGGAGACACTACATCCGTTTGGGACACCC
TGGCAGTGCAAGTAGCCAGTGGACTGTCCGCCGCAGCAACAGGCTGGGGT
TGGTGGACGGTCGATGCCGGTGGCTTCGAAGTCGACTCGACTGTTTGGTG
GAGTGGAAACATTGACACGCCTGAATACCGGGAGTTGTATGTGCGCTGGC
TGGCTTGGACGACTTTCCTGCCATTCATGCGCACTCACGGTAGCCGGACC
TGCTATTTCCAGGACGCCTACACCTGTGCCAATGAGCCGTGGTCCTATGG
TGCAAGCAACACACCCATCATTGTCTCGTACATTCATCTGCGCTACCAGC
TGGGTGCTTACCTGAAGTCCATCTTCAACCAGTTCCACCTCACAGGCCGG
AGCATCATGCGCCCATTGTATATGGATTTCGAGAAGACAGACCCGAAGAT
CTCCCAGCTGGTGTCGTCGAACAGCAACTACACGACGCAACAGTACATGT
TTGGCCCACGTCTCCTGGTCTCGCCAGTGACCTTGCCGAACGTGACTGAG
TGGCCCGTGTATCTGCCGCAGACGGGACAGAACAACACCAAGCCTTGGAC
ATACTGGTGGACGAATGAAACGTATGCCGGAGGACAGGTCGTCAAGGTGC
CTGCCCCCTTGCAACATATCCCCGTGTTTCATCTGGGATCGCGCGAAGAG
CTTCTCTCGGGTAATGTTTTCTAGGGTTCATCGATTTAGATCAGTGACGG
GATAGAAAATCTTTGAGAAGACGTAGCACTTTACGAATATCAGCCGTCTT
ATTTGAACGCAAAATTAGTTGGAGTGGATGCTCATGATATTCAGGAAAGG
TAGAAGGATGTAATAAAGAAAGCCGGGAGGGAAGAGAATAGCCCAAACGT
TGATGTTGACAGGTGACTGGCACGTGTTGCCTTCAATTCCACAGCCAACA
CTCCTCTTGTGCGGTACAGGACACACAATCCATACATGTATTCTAACTCA
ATAGCTCGTCCGCCCCAATCAGTAGCAGAGTATGCAACTCAGACAGCCGG
TAATCGAAG
back to top

Coding sequence (CDS) from alignment at ch1:916066..919174+

>KJC3_000458-T1 ID=KJC3_000458-T1|Name=KJC3_000458-T1|organism=Aspergillus niger KJC3|type=CDS|length=2211bp|location=Sequence derived from alignment at ch1:916066..919174+ (Aspergillus niger KJC3)
ATGTACTTCTCTTCCTTCTTGGCCCTAGGGGCCTTGGTTCAGGCTGCAGC
AGCAACCTATTTTGCCCCCAACTCTACCGGTCTTCGTATCCAGCATGGTT
TTGAGACGATTCTTATCCAGCCATTTGGGTACGACGGATTCCGTGTGCGC
GCATGGCCCTTCCGTCCGCCTTCGGGTAACGAGATCAGCTTCATCTACGA
TCCCCCGATCGAAGGCTATGAGGACACTGCGCATGGCATGAGCTATGACA
CCGCAACCACCGGCACGGAGCCTCGCACCTTGCGCAACGGCAATATCATC
CTGCGCACCACCGGCTGGGGTGGTACCACAGCCGGATACCGACTGTCCTT
TTATCGCGTCAATGACGATGGAAGTGAGACCCTTCTCACAAACGAATATG
CTCCGCTGAAGTCTCTCAACCCCCGGTACTATTACTGGCCGGGACCTGGG
GCCGAATTCTCAGCTGAGTTCTCTTTCAGTGCGACTCCGGATGAGCAGAT
CTATGGTACGGGCACGCAACAGGATCATATGATCAACAAGAAGGGCTCCG
TAATTGACATGGTCAACTTCAACTCCTACATCCCTACCCCGGTCTTCATG
AGCAATAAAGGCTATGCCTTCATCTGGAACATGCCAGCTGAGGGGCGTAT
GGAATTTGGCACCCTCCGGACCAGATTCACCGCCGCGTCCACGACGCTTG
TTGACTATGTAATCGTCGCCGCGCAGCCGGGCGACTACGACACCTTGCAG
CAGCGGATTTCGGCCCTCACAGGACGGGCCCCGGCCCCGCCTGACTTCTC
GCTTGGATACATCCAGTCCAAGCTACGATATGAAAACCAAACGGAGGTGG
AGCTGCTGGCTCAAAACTTCCATGACCGAAACATCCCGGTGTCCATGATC
GTTATTGACTACCAGTCCTGGGCTCACCAGGGTGATTGGGCGCTCGATCC
TCGCCTGTGGCCCAATGTTGCGCAGATGTCGGCGCGGGTCAAGAACCTCA
CCGGCGCCGAAATGATGGCATCGCTATGGCCCAGTGTTGCCGACGACAGC
GTCAATTACGCAGCCCTGCAGGCGAACGGCCTTCTCTCGGCCACGCGCGA
TGGACCTGGTACCACTGACTCCTGGAACGGATCATACATCCGGAACTATG
ACTCCACCAACCCCTCGGCGCGGAAGTTCCTCTGGAGCATGCTGAAGAAG
AACTACTACGACAAGGGTATCAAAAACTTTTGGATTGACCAAGCCGATGG
CGGAGCGCTGGGTGAGGCGTATGAGAACAACGGACAGAGCACGTATATTG
AGTCCATCCCGTTCACCCTGCCAAACGTGAACTATGCCGCTGGTACGCAG
CTCAGCGTGGGTAAGCTGTACCCCTGGGCGCATCAGCAGGCAATTGAGGA
GGGGTTCCGCAATGCAACAGATACCAAGGAAGGGAGCGCATGCGATCATG
TCTCCCTGAGTCGGTCTGGATACATCGGATCCCAGCGGTTCTGCAGCATG
ATCTGGTCGGGAGACACTACATCCGTTTGGGACACCCTGGCAGTGCAAGT
AGCCAGTGGACTGTCCGCCGCAGCAACAGGCTGGGGTTGGTGGACGGTCG
ATGCCGGTGGCTTCGAAGTCGACTCGACTGTTTGGTGGAGTGGAAACATT
GACACGCCTGAATACCGGGAGTTGTATGTGCGCTGGCTGGCTTGGACGAC
TTTCCTGCCATTCATGCGCACTCACGGTAGCCGGACCTGCTATTTCCAGG
ACGCCTACACCTGTGCCAATGAGCCGTGGTCCTATGGTGCAAGCAACACA
CCCATCATTGTCTCGTACATTCATCTGCGCTACCAGCTGGGTGCTTACCT
GAAGTCCATCTTCAACCAGTTCCACCTCACAGGCCGGAGCATCATGCGCC
CATTGTATATGGATTTCGAGAAGACAGACCCGAAGATCTCCCAGCTGGTG
TCGTCGAACAGCAACTACACGACGCAACAGTACATGTTTGGCCCACGTCT
CCTGGTCTCGCCAGTGACCTTGCCGAACGTGACTGAGTGGCCCGTGTATC
TGCCGCAGACGGGACAGAACAACACCAAGCCTTGGACATACTGGTGGACG
AATGAAACGTATGCCGGAGGACAGGTCGTCAAGGTGCCTGCCCCCTTGCA
ACATATCCCCGTGTTTCATCTGGGATCGCGCGAAGAGCTTCTCTCGGGTA
ATGTTTTCTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0030246carbohydrate binding
GO:0003824catalytic activity
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_000458KJC3_000458Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000458-T1KJC3_000458-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000458-T1.utr5p1KJC3_000458-T1.utr5p1Aspergillus niger KJC3five_prime_UTR
KJC3_000458-T1.utr5p2KJC3_000458-T1.utr5p2Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000458-T1.exon1KJC3_000458-T1.exon1Aspergillus niger KJC3exon
KJC3_000458-T1.exon2KJC3_000458-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000458-T1.cdsKJC3_000458-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000458-T1.utr3p1KJC3_000458-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
NoteSECRETED:SignalP(1-18)
NoteCAZy:GH31
DBxrefInterPro:IPR011013
DBxrefInterPro:IPR017853
DBxrefInterPro:IPR013780
DBxrefInterPro:IPR000322
DBxrefPFAM:PF01055
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:916066..919174 +
Powered by Drupal