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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:921389..924003- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000460-T1 ID=KJC3_000460-T1|Name=KJC3_000460-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2615bp|location=Sequence derived from alignment at ch1:921389..924003- (Aspergillus niger KJC3)
GAAATCATCCCGGCGAGAAAAGTCGGGCTGAGCCCACTACAATATAGCTA
CTCCCCAGGCGATGGGGAATGCTCGATAACGCCATAATCATATGCGTCCG
AGTTCCGGAGAGCCTAGTCCATGGCCTGGAGACCCGGTTTGAACTTCCCG
ACCACTTCTCTCGGCTCCGCCACTGCCCGAATTTTAAAGTTGGCTGATTT
TACTTCCCGGGCGGACTCAAGATACTACCCATGGCCCAGGCAGGAACATT
GATAGCTACCTAGCCGAATCTGATGGTCCGGCATCAAGGCTTATACCAGG
TCGTATATGCATAGCGCCATGTCTGCTCCGTCTTATCCGGGACAGCCCCA
GGGAATCCTCTATCCACCGACTCGGTGGATCTAAACGCTTCTGGCTGAGT
GGCCGATGCTCTTCCTTGATGACCCACTAGAGCATTTGGTTTGGTTTCCG
CCCAAAGCTGGGTGAGAAGAAGGAAAAAAAATGAGCGGCGAAAATTTGCG
GGGCCTTCCTGGGGCCAACCAGACCATTATCATATTTAATATTAGTACCA
TGTATAAGCCCCGTGTTCGCTAGCTGACACTCGTGCCGTTCTCAAGCCCC
CTCGTCCGCCCAAAGTGTAGGTGATTCGTGAATCATGGATCGATTCCATC
ATGATTCAGCCCGGGCCAAAGCCGACGATTCCTCGTCCATAGCGGACGGT
GTCTCCCTATCCCGTCGCCGCTACTCGCAGGGCGGACCCCCCGGCAATGA
CAGTATCGAGCTCGAGCGAATAAACACCTATCGTCTCCAACAACAACTGA
CAGTCGGATCTCGCGGAAGTCGCATACCACAAGACCAATGGTTGCCTATT
GGGGCGGGCAAGCCGTATCCCCCGCCTCTACCGGACTCCGAGGCATATGT
GGTCGAGTTCGAAGGAGCGGATGATCCGATGCATCCCCATAACTGGCCCA
TGAAGAAGAGGTAAAGCAACACAACTTACCTGTCGGACGTGTATAGACAT
GAACGGTTGCTGATGCCGTATAGGGTCATGCTTGGATCACTTCTCACCTC
CTGTGCCCTAGTGACCGCTTACGGCAGTGCGGTGTTTGCAACCGCGGCTT
CAGGTGCCGAGAAAGAGTTCGGCTTTGGTGAGGAAGTTGCGGCCCTGGGA
ACGACTCTGTATGTCCTAGGGTTCTCGGCCGGCCCAACAGTGTGGGCGCC
TAGTTCCGAGCTGCTTGGCCGGCGATGGCCGCTGTTGCTTGGGATGTTCG
GCTTCGACCTCTTCATGATAGCTACTGCCACCGCCAAGGATACCCAAACC
CTGATGCTGTGCCGTTTCTTTGCGGGTTTTTGTGCGGCCAGTATCATTGC
TCTGGTGCCTGCTAGCCTGTCTGACGTCTTCAACAACCACCAACGTGGTG
TTGCTATTGCCATGTACACTATGTCGGTGTTTACCGGTCCTTTCACAGCC
CCATTCATCGGTGGATACACCGCGTCAAGCTATCTCGGCTGGCGATGGAC
GCTATACGTCCCTGCCATAGTTGGGTTCTTCTGTCTCGCGTTGATAGTGT
TCTTTACCACAGAGACCTATGCCCCAATCATTCTGGTCCAAAAGGCAGCC
ATTCTCCGGCGCCAGACGCGGAATTGGGGCATCCACGCCCGCCAGGATGA
ATTGGAGATTGATTTCAAAGAATTGGTCACCAAGAACCTGGCGCGTCCGT
TCCTGATTCTGTTCACCGAGCCCATTGCGTTTCTGCTCACCCTCTACATG
TCCTTCATTTACGGATTGGCCTATGCGTTGCTGGAAGCTTATCCGATCAT
CTTCGAAGGTACCTATGGCATGACCGGTGGTACCGCAGGGCTGCCCTTCA
TTGGCCTTATCATTGGTGAAATCGCCGGTAGCACGTTTGTTCTGTCTTTG
TCGGGACGATATTCGCGGAAGTTGGCGGCCAACAATTACGTTGCGGTGCC
CGAATGGCGTCTCCCCCCTTGCATCGTGGGTGGTGCGGTGTTTGCTGGTG
GACTATTCTGGTATGGTTTTCTCCACGCATGTGTACAACGCCAGACTCGG
TGGAAATACTGATAAGCGGAGCAGGTTCGGTTGGACTGGATGGAACAGTA
ACATTCATTGGATGGCACCCACGGCTGCTGGTGTGGCCGTAGGATTTGGC
TTAACTTCCATCTTCATGCAGTGCTTCAACTACATCCTAGATACGTACTC
GAAGTTGTGAGTGTCTTCAAACCCCCCATACCCCTTTTATAGTAACCCTT
GGATTACATGCTAATTAAGCAGTGCGGCGTCTGCCTTTGCGGCAAATACC
ATGATGCGATCCATGGTGGGTGCCGTCTTTCCTCTTTTCACGCGACAAAT
GTTCAACAATTTGGGCATTCAATGGGCCGGCACATTGCTGGGATGCATTG
CCGTGGTAATGATTCCCATTCCGTTGATGTTCTACCTCTTTGGTGGCCGT
CTTCGGCAGAAGAGTAAATTGGCCCCTGTGATGGATCTGATGCCGCCTGC
CGAAGAAGATATCAAAGAGGCGTAGATTAATAATTATAATCCGGGGCCTT
GCTGTAGATATAATACAATGATAGACACCACATAGACTAGATAACATAGT
TCCCATATTTGCAAC back to topCoding sequence (CDS) from alignment at ch1:921389..924003- >KJC3_000460-T1 ID=KJC3_000460-T1|Name=KJC3_000460-T1|organism=Aspergillus niger KJC3|type=CDS|length=6792bp|location=Sequence derived from alignment at ch1:921389..924003- (Aspergillus niger KJC3)
TGCGGCGTCTGCCTTTGCGGCAAATACCATGATGCGATCCATGGTGGGTG
CCGTCTTTCCTCTTTTCACGCGACAAATGTTCAACAATTTGGGCATTCAA
TGGGCCGGCACATTGCTGGGATGCATTGCCGTGGTAATGATTCCCATTCC
GTTGATGTTCTACCTCTTTGGTGGCCGTCTTCGGCAGAAGAGTAAATTGG
CCCCTGTGATGGATCTGATGCCGCCTGCCGAAGAAGATATCAAAGAGGCG
TAGGTTCGGTTGGACTGGATGGAACAGTAACATTCATTGGATGGCACCCA
CGGCTGCTGGTGTGGCCGTAGGATTTGGCTTAACTTCCATCTTCATGCAG
TGCTTCAACTACATCCTAGATACGTACTCGAAGTTGGTCATGCTTGGATC
ACTTCTCACCTCCTGTGCCCTAGTGACCGCTTACGGCAGTGCGGTGTTTG
CAACCGCGGCTTCAGGTGCCGAGAAAGAGTTCGGCTTTGGTGAGGAAGTT
GCGGCCCTGGGAACGACTCTGTATGTCCTAGGGTTCTCGGCCGGCCCAAC
AGTGTGGGCGCCTAGTTCCGAGCTGCTTGGCCGGCGATGGCCGCTGTTGC
TTGGGATGTTCGGCTTCGACCTCTTCATGATAGCTACTGCCACCGCCAAG
GATACCCAAACCCTGATGCTGTGCCGTTTCTTTGCGGGTTTTTGTGCGGC
CAGTATCATTGCTCTGGTGCCTGCTAGCCTGTCTGACGTCTTCAACAACC
ACCAACGTGGTGTTGCTATTGCCATGTACACTATGTCGGTGTTTACCGGT
CCTTTCACAGCCCCATTCATCGGTGGATACACCGCGTCAAGCTATCTCGG
CTGGCGATGGACGCTATACGTCCCTGCCATAGTTGGGTTCTTCTGTCTCG
CGTTGATAGTGTTCTTTACCACAGAGACCTATGCCCCAATCATTCTGGTC
CAAAAGGCAGCCATTCTCCGGCGCCAGACGCGGAATTGGGGCATCCACGC
CCGCCAGGATGAATTGGAGATTGATTTCAAAGAATTGGTCACCAAGAACC
TGGCGCGTCCGTTCCTGATTCTGTTCACCGAGCCCATTGCGTTTCTGCTC
ACCCTCTACATGTCCTTCATTTACGGATTGGCCTATGCGTTGCTGGAAGC
TTATCCGATCATCTTCGAAGGTACCTATGGCATGACCGGTGGTACCGCAG
GGCTGCCCTTCATTGGCCTTATCATTGGTGAAATCGCCGGTAGCACGTTT
GTTCTGTCTTTGTCGGGACGATATTCGCGGAAGTTGGCGGCCAACAATTA
CGTTGCGGTGCCCGAATGGCGTCTCCCCCCTTGCATCGTGGGTGGTGCGG
TGTTTGCTGGTGGACTATTCTGATGGATCGATTCCATCATGATTCAGCCC
GGGCCAAAGCCGACGATTCCTCGTCCATAGCGGACGGTGTCTCCCTATCC
CGTCGCCGCTACTCGCAGGGCGGACCCCCCGGCAATGACAGTATCGAGCT
CGAGCGAATAAACACCTATCGTCTCCAACAACAACTGACAGTCGGATCTC
GCGGAAGTCGCATACCACAAGACCAATGGTTGCCTATTGGGGCGGGCAAG
CCGTATCCCCCGCCTCTACCGGACTCCGAGGCATATGTGGTCGAGTTCGA
AGGAGCGGATGATCCGATGCATCCCCATAACTGGCCCATGAAGAAGAGTG
CGGCGTCTGCCTTTGCGGCAAATACCATGATGCGATCCATGGTGGGTGCC
GTCTTTCCTCTTTTCACGCGACAAATGTTCAACAATTTGGGCATTCAATG
GGCCGGCACATTGCTGGGATGCATTGCCGTGGTAATGATTCCCATTCCGT
TGATGTTCTACCTCTTTGGTGGCCGTCTTCGGCAGAAGAGTAAATTGGCC
CCTGTGATGGATCTGATGCCGCCTGCCGAAGAAGATATCAAAGAGGCGTA
GGTTCGGTTGGACTGGATGGAACAGTAACATTCATTGGATGGCACCCACG
GCTGCTGGTGTGGCCGTAGGATTTGGCTTAACTTCCATCTTCATGCAGTG
CTTCAACTACATCCTAGATACGTACTCGAAGTTGGTCATGCTTGGATCAC
TTCTCACCTCCTGTGCCCTAGTGACCGCTTACGGCAGTGCGGTGTTTGCA
ACCGCGGCTTCAGGTGCCGAGAAAGAGTTCGGCTTTGGTGAGGAAGTTGC
GGCCCTGGGAACGACTCTGTATGTCCTAGGGTTCTCGGCCGGCCCAACAG
TGTGGGCGCCTAGTTCCGAGCTGCTTGGCCGGCGATGGCCGCTGTTGCTT
GGGATGTTCGGCTTCGACCTCTTCATGATAGCTACTGCCACCGCCAAGGA
TACCCAAACCCTGATGCTGTGCCGTTTCTTTGCGGGTTTTTGTGCGGCCA
GTATCATTGCTCTGGTGCCTGCTAGCCTGTCTGACGTCTTCAACAACCAC
CAACGTGGTGTTGCTATTGCCATGTACACTATGTCGGTGTTTACCGGTCC
TTTCACAGCCCCATTCATCGGTGGATACACCGCGTCAAGCTATCTCGGCT
GGCGATGGACGCTATACGTCCCTGCCATAGTTGGGTTCTTCTGTCTCGCG
TTGATAGTGTTCTTTACCACAGAGACCTATGCCCCAATCATTCTGGTCCA
AAAGGCAGCCATTCTCCGGCGCCAGACGCGGAATTGGGGCATCCACGCCC
GCCAGGATGAATTGGAGATTGATTTCAAAGAATTGGTCACCAAGAACCTG
GCGCGTCCGTTCCTGATTCTGTTCACCGAGCCCATTGCGTTTCTGCTCAC
CCTCTACATGTCCTTCATTTACGGATTGGCCTATGCGTTGCTGGAAGCTT
ATCCGATCATCTTCGAAGGTACCTATGGCATGACCGGTGGTACCGCAGGG
CTGCCCTTCATTGGCCTTATCATTGGTGAAATCGCCGGTAGCACGTTTGT
TCTGTCTTTGTCGGGACGATATTCGCGGAAGTTGGCGGCCAACAATTACG
TTGCGGTGCCCGAATGGCGTCTCCCCCCTTGCATCGTGGGTGGTGCGGTG
TTTGCTGGTGGACTATTCTGATGGATCGATTCCATCATGATTCAGCCCGG
GCCAAAGCCGACGATTCCTCGTCCATAGCGGACGGTGTCTCCCTATCCCG
TCGCCGCTACTCGCAGGGCGGACCCCCCGGCAATGACAGTATCGAGCTCG
AGCGAATAAACACCTATCGTCTCCAACAACAACTGACAGTCGGATCTCGC
GGAAGTCGCATACCACAAGACCAATGGTTGCCTATTGGGGCGGGCAAGCC
GTATCCCCCGCCTCTACCGGACTCCGAGGCATATGTGGTCGAGTTCGAAG
GAGCGGATGATCCGATGCATCCCCATAACTGGCCCATGAAGAAGAGTGCG
GCGTCTGCCTTTGCGGCAAATACCATGATGCGATCCATGGTGGGTGCCGT
CTTTCCTCTTTTCACGCGACAAATGTTCAACAATTTGGGCATTCAATGGG
CCGGCACATTGCTGGGATGCATTGCCGTGGTAATGATTCCCATTCCGTTG
ATGTTCTACCTCTTTGGTGGCCGTCTTCGGCAGAAGAGTAAATTGGCCCC
TGTGATGGATCTGATGCCGCCTGCCGAAGAAGATATCAAAGAGGCGTAGG
TTCGGTTGGACTGGATGGAACAGTAACATTCATTGGATGGCACCCACGGC
TGCTGGTGTGGCCGTAGGATTTGGCTTAACTTCCATCTTCATGCAGTGCT
TCAACTACATCCTAGATACGTACTCGAAGTTGGTCATGCTTGGATCACTT
CTCACCTCCTGTGCCCTAGTGACCGCTTACGGCAGTGCGGTGTTTGCAAC
CGCGGCTTCAGGTGCCGAGAAAGAGTTCGGCTTTGGTGAGGAAGTTGCGG
CCCTGGGAACGACTCTGTATGTCCTAGGGTTCTCGGCCGGCCCAACAGTG
TGGGCGCCTAGTTCCGAGCTGCTTGGCCGGCGATGGCCGCTGTTGCTTGG
GATGTTCGGCTTCGACCTCTTCATGATAGCTACTGCCACCGCCAAGGATA
CCCAAACCCTGATGCTGTGCCGTTTCTTTGCGGGTTTTTGTGCGGCCAGT
ATCATTGCTCTGGTGCCTGCTAGCCTGTCTGACGTCTTCAACAACCACCA
ACGTGGTGTTGCTATTGCCATGTACACTATGTCGGTGTTTACCGGTCCTT
TCACAGCCCCATTCATCGGTGGATACACCGCGTCAAGCTATCTCGGCTGG
CGATGGACGCTATACGTCCCTGCCATAGTTGGGTTCTTCTGTCTCGCGTT
GATAGTGTTCTTTACCACAGAGACCTATGCCCCAATCATTCTGGTCCAAA
AGGCAGCCATTCTCCGGCGCCAGACGCGGAATTGGGGCATCCACGCCCGC
CAGGATGAATTGGAGATTGATTTCAAAGAATTGGTCACCAAGAACCTGGC
GCGTCCGTTCCTGATTCTGTTCACCGAGCCCATTGCGTTTCTGCTCACCC
TCTACATGTCCTTCATTTACGGATTGGCCTATGCGTTGCTGGAAGCTTAT
CCGATCATCTTCGAAGGTACCTATGGCATGACCGGTGGTACCGCAGGGCT
GCCCTTCATTGGCCTTATCATTGGTGAAATCGCCGGTAGCACGTTTGTTC
TGTCTTTGTCGGGACGATATTCGCGGAAGTTGGCGGCCAACAATTACGTT
GCGGTGCCCGAATGGCGTCTCCCCCCTTGCATCGTGGGTGGTGCGGTGTT
TGCTGGTGGACTATTCTGATGGATCGATTCCATCATGATTCAGCCCGGGC
CAAAGCCGACGATTCCTCGTCCATAGCGGACGGTGTCTCCCTATCCCGTC
GCCGCTACTCGCAGGGCGGACCCCCCGGCAATGACAGTATCGAGCTCGAG
CGAATAAACACCTATCGTCTCCAACAACAACTGACAGTCGGATCTCGCGG
AAGTCGCATACCACAAGACCAATGGTTGCCTATTGGGGCGGGCAAGCCGT
ATCCCCCGCCTCTACCGGACTCCGAGGCATATGTGGTCGAGTTCGAAGGA
GCGGATGATCCGATGCATCCCCATAACTGGCCCATGAAGAAGAGTGCGGC
GTCTGCCTTTGCGGCAAATACCATGATGCGATCCATGGTGGGTGCCGTCT
TTCCTCTTTTCACGCGACAAATGTTCAACAATTTGGGCATTCAATGGGCC
GGCACATTGCTGGGATGCATTGCCGTGGTAATGATTCCCATTCCGTTGAT
GTTCTACCTCTTTGGTGGCCGTCTTCGGCAGAAGAGTAAATTGGCCCCTG
TGATGGATCTGATGCCGCCTGCCGAAGAAGATATCAAAGAGGCGTAGGTT
CGGTTGGACTGGATGGAACAGTAACATTCATTGGATGGCACCCACGGCTG
CTGGTGTGGCCGTAGGATTTGGCTTAACTTCCATCTTCATGCAGTGCTTC
AACTACATCCTAGATACGTACTCGAAGTTGGTCATGCTTGGATCACTTCT
CACCTCCTGTGCCCTAGTGACCGCTTACGGCAGTGCGGTGTTTGCAACCG
CGGCTTCAGGTGCCGAGAAAGAGTTCGGCTTTGGTGAGGAAGTTGCGGCC
CTGGGAACGACTCTGTATGTCCTAGGGTTCTCGGCCGGCCCAACAGTGTG
GGCGCCTAGTTCCGAGCTGCTTGGCCGGCGATGGCCGCTGTTGCTTGGGA
TGTTCGGCTTCGACCTCTTCATGATAGCTACTGCCACCGCCAAGGATACC
CAAACCCTGATGCTGTGCCGTTTCTTTGCGGGTTTTTGTGCGGCCAGTAT
CATTGCTCTGGTGCCTGCTAGCCTGTCTGACGTCTTCAACAACCACCAAC
GTGGTGTTGCTATTGCCATGTACACTATGTCGGTGTTTACCGGTCCTTTC
ACAGCCCCATTCATCGGTGGATACACCGCGTCAAGCTATCTCGGCTGGCG
ATGGACGCTATACGTCCCTGCCATAGTTGGGTTCTTCTGTCTCGCGTTGA
TAGTGTTCTTTACCACAGAGACCTATGCCCCAATCATTCTGGTCCAAAAG
GCAGCCATTCTCCGGCGCCAGACGCGGAATTGGGGCATCCACGCCCGCCA
GGATGAATTGGAGATTGATTTCAAAGAATTGGTCACCAAGAACCTGGCGC
GTCCGTTCCTGATTCTGTTCACCGAGCCCATTGCGTTTCTGCTCACCCTC
TACATGTCCTTCATTTACGGATTGGCCTATGCGTTGCTGGAAGCTTATCC
GATCATCTTCGAAGGTACCTATGGCATGACCGGTGGTACCGCAGGGCTGC
CCTTCATTGGCCTTATCATTGGTGAAATCGCCGGTAGCACGTTTGTTCTG
TCTTTGTCGGGACGATATTCGCGGAAGTTGGCGGCCAACAATTACGTTGC
GGTGCCCGAATGGCGTCTCCCCCCTTGCATCGTGGGTGGTGCGGTGTTTG
CTGGTGGACTATTCTGATGGATCGATTCCATCATGATTCAGCCCGGGCCA
AAGCCGACGATTCCTCGTCCATAGCGGACGGTGTCTCCCTATCCCGTCGC
CGCTACTCGCAGGGCGGACCCCCCGGCAATGACAGTATCGAGCTCGAGCG
AATAAACACCTATCGTCTCCAACAACAACTGACAGTCGGATCTCGCGGAA
GTCGCATACCACAAGACCAATGGTTGCCTATTGGGGCGGGCAAGCCGTAT
CCCCCGCCTCTACCGGACTCCGAGGCATATGTGGTCGAGTTCGAAGGAGC
GGATGATCCGATGCATCCCCATAACTGGCCCATGAAGAAGAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000460-T1.utr3p1 | KJC3_000460-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000460-T1.utr5p1 | KJC3_000460-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR020846 |
| DBxref | InterPro:IPR011701 |
| DBxref | PFAM:PF07690 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:921389..924003 - |
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