|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:926277..928685+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000462-T1 ID=KJC3_000462-T1|Name=KJC3_000462-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2409bp|location=Sequence derived from alignment at ch1:926277..928685+ (Aspergillus niger KJC3)
CAGTACAAGCCGGACCCCACAGAGGGGCCCGTGTGTCGGTGGTGTTTATC
TATTGCCAGGTACCCAGAGGGGCACAAGCAAAGATCTTCGAGCTGTCAAT
TCAGAGACGGAGCTGAAAAGGCACTCGAACCAGCCATGCGTGCTTCCTCC
GAACGATCCTCCACCGATGCCATGGCCAGAGACGAACCTGACTTAATGGT
GCCCACACCGCACGAGGAGCAGCCCTTGCTGCGTCCCGATGCTGAAGCCC
TCTGGAAGCCACCGGTAGGCTTCGTTTGGATCCAACTAGGTTTGTCGATG
GTCAGTTCGTGACATGAGGGGTCTAACACAATTACAGCCATCATGTCGAA
TGTGTTCCTGTCTGGTTTCGACGGCACTATCACTGCCTCAACCTATGCTG
TAATCAGCTCCGAATTCAACGCAGCCAATACCGCCTCGTGGCTCACAACT
TCCTACCTGATCACTAGCACCGCATTTCAGCCACTATACGGTCGCTTCTC
GGACATTTTCGGTCGCCGAACCTCCTTCTTTACAGCGACAATCACTTTCA
TGATCGGCTGTTTGGGTTGTGGGATCGCTAAAGATATTGTCCTTCTGAAT
CTGATGAGAGCGCTGACCGGTATTGGCGGTGGAGGCTTGATGACAATGGG
TATGCACTCGCAAATATCCCCTTTCTCACTTGTCAATCTTCCAGAAGAGA
GACTAATGTGATCCAGCCACTATTATCAACTCAGATCTCATCCCCTTCCG
TCGTCGCGGCATGTATCAAGCCGTACAAAACGTTCTACATGGATTTGGGT
CCATCTGCGGCGCATCGTTTGGAGGGACCATTGTCGATTCAGTTGGGTGG
CGCTGGTGCTTTCTGTTACAAGTACCGGTCGGGCTTCTAGCTCTGATTAC
CGGTCATCTTGTCTTGAACCTGCCAACCCAGGACAAGTTTGCCAGCGAAG
GCAGGAGTCTGCGGACAATCTGGAAATACGTAGATCTGTCTGGAGCTTGT
GCTCTGATCGTTGGTCTTTCAACAAAGTTGGTGGGTCTAAGCTTGGGTGG
AAATGAGCTCCCCTGGTCCAACGTGTGGGTGATCTTGTCATTCGTGGCAA
GTATAGTATCAATGGGCCTTTTCGTACTCATTGAGGCAAAGACAACTGCA
ATCCCATTGATTCCCCCTCGAATGTTGAAAGGTGTTCTGCCTGTTGCTAC
GCAGGTTGCCAATGTCTGCGTGGGAATGGCTGCCTATGCGGTGAGTGACC
CTGATATCGGGTACCCAATTCATTGCTGACCGTTAAAGTTCCTTTTTACG
CTCCCATTATTGTTTCAGGTAATCCTTTTGGATTCCCCTTCTAAGGCAGG
TGCCCGACTTGCCGTACCGTCTCTTGCTACTCCGATTGGTGGTGTGATTT
CTGGCTATGTGATGTCGCGCTGGGGTAAATTGGCCTACCTAGTCCGCACA
GGCTCGTTTCTCATGTGCATTGGCAACATACTTGTGATGCTCCTTCAGTT
CAATGACGCAGAGTGGAAGTACTACGCGGCCATGATTCCCGCCAGTCTTG
GCCAAGGCATCACTTATCCAGGCATCTTGTTCACGTTCCTTGCCGCATTC
GATCACGCCGGTATGAGCACCTTTCCGCCACTTTCTTCGCCAGAGATATC
TTGACTGAACAATTAAACTGACTGATTTGTAGACCACGCAGTTTCAGCGT
CTACTGTCTATCTGGTCCGTTCGATGGGTACGGTGTGGGGCGTCGCCATT
ACGTCCACCATTATCCAGAACACCTTGCGCTCAGGCCTCGCTGAGGCCTT
GAGTGGAATACCAGACAAATGGAAAGTAACTCTCCTTCCAATGGACTTAC
TAATACCCCGAAACAATGGCTGATCAGTATTATGCTACTCGCACAGGTTA
TCGACGACATCAGACATTCAGTGTCTGCCATCCATAGTCTGCCGCCAGAG
ATCCAGCTGGCTGCGCGGATGGTCTATTACCGGGGTATACGCCTGTCATT
CTTGGCGTCAGCGTGTTTCGGATTCGTTGCTGCTACTGCAGCTCTATTCA
CTCGCGGAAAGGGCCTCCATCGCTCCAGCGAGGCGTAGATCATGCGTATG
TCGCACACTGACTCGCTTAACAGACAAGCCATCTGGAATGCGGTCCGCCC
AGTACCTGGATGAGATGCGGGGCCGAAGTGGCGACTCTCGGGGAAGGTAG
GTCTGGTGGACAAATGATCGCCAGCTTCAATTTTGGAGGACTCGGCTTCG
CAAACTTAGAATTAGACAAAAGTCAATTAGCTCATGAGAGGAGGGGAGAG
GCTTTTGGTTTATGACCACCCATACGGGGTGATCTGTTGGACTGACCAGG
CAGCTGACTGGTTATGAAGGAGACGTCCAATCCCAGAAAAAGCACAGACT
ATAATAAAT back to topCoding sequence (CDS) from alignment at ch1:926277..928685+ >KJC3_000462-T1 ID=KJC3_000462-T1|Name=KJC3_000462-T1|organism=Aspergillus niger KJC3|type=CDS|length=7515bp|location=Sequence derived from alignment at ch1:926277..928685+ (Aspergillus niger KJC3)
ATGCGTGCTTCCTCCGAACGATCCTCCACCGATGCCATGGCCAGAGACGA
ACCTGACTTAATGGTGCCCACACCGCACGAGGAGCAGCCCTTGCTGCGTC
CCGATGCTGAAGCCCTCTGGAAGCCACCGGTAGGCTTCGTTTGGATCCAA
CTAGCCATCATGTCGAATGTGTTCCTGTCTGGTTTCGACGGCACTATCAC
TGCCTCAACCTATGCTGTAATCAGCTCCGAATTCAACGCAGCCAATACCG
CCTCGTGGCTCACAACTTCCTACCTGATCACTAGCACCGCATTTCAGCCA
CTATACGGTCGCTTCTCGGACATTTTCGGTCGCCGAACCTCCTTCTTTAC
AGCGACAATCACTTTCATGATCGGCTGTTTGGGTTGTGGGATCGCTAAAG
ATATTGTCCTTCTGAATCTGATGAGAGCGCTGACCGGTATTGGCGGTGGA
GGCTTGATGACAATGGCCACTATTATCAACTCAGATCTCATCCCCTTCCG
TCGTCGCGGCATGTATCAAGCCGTACAAAACGTTCTACATGGATTTGGGT
CCATCTGCGGCGCATCGTTTGGAGGGACCATTGTCGATTCAGTTGGGTGG
CGCTGGTGCTTTCTGTTACAAGTACCGGTCGGGCTTCTAGCTCTGATTAC
CGGTCATCTTGTCTTGAACCTGCCAACCCAGGACAAGTTTGCCAGCGAAG
GCAGGAGTCTGCGGACAATCTGGAAATACGTAGATCTGTCTGGAGCTTGT
GCTCTGATCGTTGGTCTTTCAACAAAGTTGGTGGGTCTAAGCTTGGGTGG
AAATGAGCTCCCCTGGTCCAACGTGTGGGTGATCTTGTCATTCGTGGCAA
GTATAGTATCAATGGGCCTTTTCGTACTCATTGAGGCAAAGACAACTGCA
ATCCCATTGATTCCCCCTCGAATGTTGAAAGGTGTTCTGCCTGTTGCTAC
GCAGGTTGCCAATGTCTGCGTGGGAATGGCTGCCTATGCGTTCCTTTTTA
CGCTCCCATTATTGTTTCAGGTAATCCTTTTGGATTCCCCTTCTAAGGCA
GGTGCCCGACTTGCCGTACCGTCTCTTGCTACTCCGATTGGTGGTGTGAT
TTCTGGCTATGTGATGTCGCGCTGGGGTAAATTGGCCTACCTAGTCCGCA
CAGGCTCGTTTCTCATGTGCATTGGCAACATACTTGTGATGCTCCTTCAG
TTCAATGACGCAGAGTGGAAGTACTACGCGGCCATGATTCCCGCCAGTCT
TGGCCAAGGCATCACTTATCCAGGCATCTTGTTCACGTTCCTTGCCGCAT
TCGATCACGCCGACCACGCAGTTTCAGCGTCTACTGTCTATCTGGTCCGT
TCGATGGGTACGGTGTGGGGCGTCGCCATTACGTCCACCATTATCCAGAA
CACCTTGCGCTCAGGCCTCGCTGAGGCCTTGAGTGGAATACCAGACAAAT
GGAAAGTAACTCTCCTTCCAATGGACTTACTAATACCCCGAAACAATGGC
TGAATGCGTGCTTCCTCCGAACGATCCTCCACCGATGCCATGGCCAGAGA
CGAACCTGACTTAATGGTGCCCACACCGCACGAGGAGCAGCCCTTGCTGC
GTCCCGATGCTGAAGCCCTCTGGAAGCCACCGGTAGGCTTCGTTTGGATC
CAACTAGCCATCATGTCGAATGTGTTCCTGTCTGGTTTCGACGGCACTAT
CACTGCCTCAACCTATGCTGTAATCAGCTCCGAATTCAACGCAGCCAATA
CCGCCTCGTGGCTCACAACTTCCTACCTGATCACTAGCACCGCATTTCAG
CCACTATACGGTCGCTTCTCGGACATTTTCGGTCGCCGAACCTCCTTCTT
TACAGCGACAATCACTTTCATGATCGGCTGTTTGGGTTGTGGGATCGCTA
AAGATATTGTCCTTCTGAATCTGATGAGAGCGCTGACCGGTATTGGCGGT
GGAGGCTTGATGACAATGGCCACTATTATCAACTCAGATCTCATCCCCTT
CCGTCGTCGCGGCATGTATCAAGCCGTACAAAACGTTCTACATGGATTTG
GGTCCATCTGCGGCGCATCGTTTGGAGGGACCATTGTCGATTCAGTTGGG
TGGCGCTGGTGCTTTCTGTTACAAGTACCGGTCGGGCTTCTAGCTCTGAT
TACCGGTCATCTTGTCTTGAACCTGCCAACCCAGGACAAGTTTGCCAGCG
AAGGCAGGAGTCTGCGGACAATCTGGAAATACGTAGATCTGTCTGGAGCT
TGTGCTCTGATCGTTGGTCTTTCAACAAAGTTGGTGGGTCTAAGCTTGGG
TGGAAATGAGCTCCCCTGGTCCAACGTGTGGGTGATCTTGTCATTCGTGG
CAAGTATAGTATCAATGGGCCTTTTCGTACTCATTGAGGCAAAGACAACT
GCAATCCCATTGATTCCCCCTCGAATGTTGAAAGGTGTTCTGCCTGTTGC
TACGCAGGTTGCCAATGTCTGCGTGGGAATGGCTGCCTATGCGTTCCTTT
TTACGCTCCCATTATTGTTTCAGGTAATCCTTTTGGATTCCCCTTCTAAG
GCAGGTGCCCGACTTGCCGTACCGTCTCTTGCTACTCCGATTGGTGGTGT
GATTTCTGGCTATGTGATGTCGCGCTGGGGTAAATTGGCCTACCTAGTCC
GCACAGGCTCGTTTCTCATGTGCATTGGCAACATACTTGTGATGCTCCTT
CAGTTCAATGACGCAGAGTGGAAGTACTACGCGGCCATGATTCCCGCCAG
TCTTGGCCAAGGCATCACTTATCCAGGCATCTTGTTCACGTTCCTTGCCG
CATTCGATCACGCCGACCACGCAGTTTCAGCGTCTACTGTCTATCTGGTC
CGTTCGATGGGTACGGTGTGGGGCGTCGCCATTACGTCCACCATTATCCA
GAACACCTTGCGCTCAGGCCTCGCTGAGGCCTTGAGTGGAATACCAGACA
AATGGAAAGTAACTCTCCTTCCAATGGACTTACTAATACCCCGAAACAAT
GGCTGAATGCGTGCTTCCTCCGAACGATCCTCCACCGATGCCATGGCCAG
AGACGAACCTGACTTAATGGTGCCCACACCGCACGAGGAGCAGCCCTTGC
TGCGTCCCGATGCTGAAGCCCTCTGGAAGCCACCGGTAGGCTTCGTTTGG
ATCCAACTAGCCATCATGTCGAATGTGTTCCTGTCTGGTTTCGACGGCAC
TATCACTGCCTCAACCTATGCTGTAATCAGCTCCGAATTCAACGCAGCCA
ATACCGCCTCGTGGCTCACAACTTCCTACCTGATCACTAGCACCGCATTT
CAGCCACTATACGGTCGCTTCTCGGACATTTTCGGTCGCCGAACCTCCTT
CTTTACAGCGACAATCACTTTCATGATCGGCTGTTTGGGTTGTGGGATCG
CTAAAGATATTGTCCTTCTGAATCTGATGAGAGCGCTGACCGGTATTGGC
GGTGGAGGCTTGATGACAATGGCCACTATTATCAACTCAGATCTCATCCC
CTTCCGTCGTCGCGGCATGTATCAAGCCGTACAAAACGTTCTACATGGAT
TTGGGTCCATCTGCGGCGCATCGTTTGGAGGGACCATTGTCGATTCAGTT
GGGTGGCGCTGGTGCTTTCTGTTACAAGTACCGGTCGGGCTTCTAGCTCT
GATTACCGGTCATCTTGTCTTGAACCTGCCAACCCAGGACAAGTTTGCCA
GCGAAGGCAGGAGTCTGCGGACAATCTGGAAATACGTAGATCTGTCTGGA
GCTTGTGCTCTGATCGTTGGTCTTTCAACAAAGTTGGTGGGTCTAAGCTT
GGGTGGAAATGAGCTCCCCTGGTCCAACGTGTGGGTGATCTTGTCATTCG
TGGCAAGTATAGTATCAATGGGCCTTTTCGTACTCATTGAGGCAAAGACA
ACTGCAATCCCATTGATTCCCCCTCGAATGTTGAAAGGTGTTCTGCCTGT
TGCTACGCAGGTTGCCAATGTCTGCGTGGGAATGGCTGCCTATGCGTTCC
TTTTTACGCTCCCATTATTGTTTCAGGTAATCCTTTTGGATTCCCCTTCT
AAGGCAGGTGCCCGACTTGCCGTACCGTCTCTTGCTACTCCGATTGGTGG
TGTGATTTCTGGCTATGTGATGTCGCGCTGGGGTAAATTGGCCTACCTAG
TCCGCACAGGCTCGTTTCTCATGTGCATTGGCAACATACTTGTGATGCTC
CTTCAGTTCAATGACGCAGAGTGGAAGTACTACGCGGCCATGATTCCCGC
CAGTCTTGGCCAAGGCATCACTTATCCAGGCATCTTGTTCACGTTCCTTG
CCGCATTCGATCACGCCGACCACGCAGTTTCAGCGTCTACTGTCTATCTG
GTCCGTTCGATGGGTACGGTGTGGGGCGTCGCCATTACGTCCACCATTAT
CCAGAACACCTTGCGCTCAGGCCTCGCTGAGGCCTTGAGTGGAATACCAG
ACAAATGGAAAGTAACTCTCCTTCCAATGGACTTACTAATACCCCGAAAC
AATGGCTGAATGCGTGCTTCCTCCGAACGATCCTCCACCGATGCCATGGC
CAGAGACGAACCTGACTTAATGGTGCCCACACCGCACGAGGAGCAGCCCT
TGCTGCGTCCCGATGCTGAAGCCCTCTGGAAGCCACCGGTAGGCTTCGTT
TGGATCCAACTAGCCATCATGTCGAATGTGTTCCTGTCTGGTTTCGACGG
CACTATCACTGCCTCAACCTATGCTGTAATCAGCTCCGAATTCAACGCAG
CCAATACCGCCTCGTGGCTCACAACTTCCTACCTGATCACTAGCACCGCA
TTTCAGCCACTATACGGTCGCTTCTCGGACATTTTCGGTCGCCGAACCTC
CTTCTTTACAGCGACAATCACTTTCATGATCGGCTGTTTGGGTTGTGGGA
TCGCTAAAGATATTGTCCTTCTGAATCTGATGAGAGCGCTGACCGGTATT
GGCGGTGGAGGCTTGATGACAATGGCCACTATTATCAACTCAGATCTCAT
CCCCTTCCGTCGTCGCGGCATGTATCAAGCCGTACAAAACGTTCTACATG
GATTTGGGTCCATCTGCGGCGCATCGTTTGGAGGGACCATTGTCGATTCA
GTTGGGTGGCGCTGGTGCTTTCTGTTACAAGTACCGGTCGGGCTTCTAGC
TCTGATTACCGGTCATCTTGTCTTGAACCTGCCAACCCAGGACAAGTTTG
CCAGCGAAGGCAGGAGTCTGCGGACAATCTGGAAATACGTAGATCTGTCT
GGAGCTTGTGCTCTGATCGTTGGTCTTTCAACAAAGTTGGTGGGTCTAAG
CTTGGGTGGAAATGAGCTCCCCTGGTCCAACGTGTGGGTGATCTTGTCAT
TCGTGGCAAGTATAGTATCAATGGGCCTTTTCGTACTCATTGAGGCAAAG
ACAACTGCAATCCCATTGATTCCCCCTCGAATGTTGAAAGGTGTTCTGCC
TGTTGCTACGCAGGTTGCCAATGTCTGCGTGGGAATGGCTGCCTATGCGT
TCCTTTTTACGCTCCCATTATTGTTTCAGGTAATCCTTTTGGATTCCCCT
TCTAAGGCAGGTGCCCGACTTGCCGTACCGTCTCTTGCTACTCCGATTGG
TGGTGTGATTTCTGGCTATGTGATGTCGCGCTGGGGTAAATTGGCCTACC
TAGTCCGCACAGGCTCGTTTCTCATGTGCATTGGCAACATACTTGTGATG
CTCCTTCAGTTCAATGACGCAGAGTGGAAGTACTACGCGGCCATGATTCC
CGCCAGTCTTGGCCAAGGCATCACTTATCCAGGCATCTTGTTCACGTTCC
TTGCCGCATTCGATCACGCCGACCACGCAGTTTCAGCGTCTACTGTCTAT
CTGGTCCGTTCGATGGGTACGGTGTGGGGCGTCGCCATTACGTCCACCAT
TATCCAGAACACCTTGCGCTCAGGCCTCGCTGAGGCCTTGAGTGGAATAC
CAGACAAATGGAAAGTAACTCTCCTTCCAATGGACTTACTAATACCCCGA
AACAATGGCTGAATGCGTGCTTCCTCCGAACGATCCTCCACCGATGCCAT
GGCCAGAGACGAACCTGACTTAATGGTGCCCACACCGCACGAGGAGCAGC
CCTTGCTGCGTCCCGATGCTGAAGCCCTCTGGAAGCCACCGGTAGGCTTC
GTTTGGATCCAACTAGCCATCATGTCGAATGTGTTCCTGTCTGGTTTCGA
CGGCACTATCACTGCCTCAACCTATGCTGTAATCAGCTCCGAATTCAACG
CAGCCAATACCGCCTCGTGGCTCACAACTTCCTACCTGATCACTAGCACC
GCATTTCAGCCACTATACGGTCGCTTCTCGGACATTTTCGGTCGCCGAAC
CTCCTTCTTTACAGCGACAATCACTTTCATGATCGGCTGTTTGGGTTGTG
GGATCGCTAAAGATATTGTCCTTCTGAATCTGATGAGAGCGCTGACCGGT
ATTGGCGGTGGAGGCTTGATGACAATGGCCACTATTATCAACTCAGATCT
CATCCCCTTCCGTCGTCGCGGCATGTATCAAGCCGTACAAAACGTTCTAC
ATGGATTTGGGTCCATCTGCGGCGCATCGTTTGGAGGGACCATTGTCGAT
TCAGTTGGGTGGCGCTGGTGCTTTCTGTTACAAGTACCGGTCGGGCTTCT
AGCTCTGATTACCGGTCATCTTGTCTTGAACCTGCCAACCCAGGACAAGT
TTGCCAGCGAAGGCAGGAGTCTGCGGACAATCTGGAAATACGTAGATCTG
TCTGGAGCTTGTGCTCTGATCGTTGGTCTTTCAACAAAGTTGGTGGGTCT
AAGCTTGGGTGGAAATGAGCTCCCCTGGTCCAACGTGTGGGTGATCTTGT
CATTCGTGGCAAGTATAGTATCAATGGGCCTTTTCGTACTCATTGAGGCA
AAGACAACTGCAATCCCATTGATTCCCCCTCGAATGTTGAAAGGTGTTCT
GCCTGTTGCTACGCAGGTTGCCAATGTCTGCGTGGGAATGGCTGCCTATG
CGTTCCTTTTTACGCTCCCATTATTGTTTCAGGTAATCCTTTTGGATTCC
CCTTCTAAGGCAGGTGCCCGACTTGCCGTACCGTCTCTTGCTACTCCGAT
TGGTGGTGTGATTTCTGGCTATGTGATGTCGCGCTGGGGTAAATTGGCCT
ACCTAGTCCGCACAGGCTCGTTTCTCATGTGCATTGGCAACATACTTGTG
ATGCTCCTTCAGTTCAATGACGCAGAGTGGAAGTACTACGCGGCCATGAT
TCCCGCCAGTCTTGGCCAAGGCATCACTTATCCAGGCATCTTGTTCACGT
TCCTTGCCGCATTCGATCACGCCGACCACGCAGTTTCAGCGTCTACTGTC
TATCTGGTCCGTTCGATGGGTACGGTGTGGGGCGTCGCCATTACGTCCAC
CATTATCCAGAACACCTTGCGCTCAGGCCTCGCTGAGGCCTTGAGTGGAA
TACCAGACAAATGGAAAGTAACTCTCCTTCCAATGGACTTACTAATACCC
CGAAACAATGGCTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000462-T1.utr5p1 | KJC3_000462-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000462-T1.utr3p1 | KJC3_000462-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR020846 |
| DBxref | InterPro:IPR011701 |
| DBxref | PFAM:PF07690 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:926277..928685 + |
|
