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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:961543..964597+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000472-T1 ID=KJC3_000472-T1|Name=KJC3_000472-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3055bp|location=Sequence derived from alignment at ch1:961543..964597+ (Aspergillus niger KJC3)
GGATATTCGACCAGTCCGACTGCCTCGAATTCTACCCTCCGCGTTTCTCA
GTTCAACAAGACCACCATCTGTACAGTTATAATACACTTCTAATACACTA
CATTCACGGCTGAAATTCAAATGACCATGCTTTGACGCTCACATTCCGGC
ATACATTTCCTATACCTACCGCATAATTCATCCGCCCGCCGGCCCGCCAC
TCAACTACGCGATAAAGATCGAAGCACACGATCACAAAGCCTGAGCAATG
CCTACGCCGTTCCCTCCTAGAAAGCCCTCTACGCCGTCCCGCGCAACACC
CGCGAAGTCGAAAGCTACGAAACGCAATACCAGTCTTCTCAGTTTCTTTC
AGAAGGCGGACGGCCCGCCGAAAGCTACGTCCCGGCAATCGCGGATTACG
CAATTCGCGACGAAGGCGGAGAGAAGTAATACTGGTAATGAGGGCTCCTC
GGGGGTGAGGGGTGGGAATGGGGCTGCTGGTGCCGGGGGTTTGTTTTTGG
AGGATGCCAAGAAGGTGGTTAGTCTTACGAGTGGAGGGGACTATGTCAGG
GAAAAGACACCGGAGGATATTTGGGAGGAAGAAGGAGAAGAAGAAGAACG
GTTCCAGGAGAATGGGGGCAGTGTGAAGAAGAGGAGGGTTGGGGAAGCTA
TTGCGCTGGAAGATGACATTGATAATGGGAGTGGGGAGGATAAGAAGAGG
AAGACGGAGAGTGAGAGTGGCACTGAGGAGAAGTCAAAGCCGAAGCCGTC
TCGATCAGTCAGTGGACCGTTCATTGATGAGTCGGATAGTGAGAGCGAGG
ATCTTGAGCAGTTCAGGGAATACGAGAATGGGACTGAGAATGAGACCGGG
GTATTGGATGAGAAGACAAACTCGGCGGATGAAACCCGGACCCCCGCAGT
CGATGTCGACACACCACCGGTAAGAGAAGCCACGAGCCACGCCGATGATG
ATTACGCGAATTTTGACGATCTAGAAGAGGACGAGTTTCGAGGGGAAGAA
GACTTCTTAGGTGCATTTGACGACGATGAGGATTACAAGGGTGATATTGG
ATTTGATGATAGCGGGGTTTTGGGTGAAGATTTTGGATGCGAAGCGCCGG
TGTGTCCCGTATGTCAGGCTGTTTTGACAGGCTTGTCCGAGACGGTAAGT
TGTGAGGATTGTGTCTTTGGTGCTGGTGGTAATGGTTGTTCTAGGATGTC
TCGGTACATGTCAATGACTGTCTTGATGGGAAGCCTACGGAGTTGCTGAA
ACACGAGCCAGAGGCGGAGGCAGACCCGGACCCGGAGCCGGGACCGGAGC
TAAAGACTACGAAAGGAATGAGCCTTGCGGACAGGGCTGCTATTGCGAGA
CCAGCGCAGCGTGACCCATATGCCTCTGGGGTCGCAGGGACGAGGTCGGC
TTTTTCGAAGCTCATGGCCGGCAACGCGGAAGATACAGCATGGAGTGCAG
CGGCGGCGAACGAGGTTGCGTCCCGTGGCAAACAGGCGTATCAACGGACG
TGTCCGTTCTACAAGATCATCCCTGGATTCTCCCTCTGTGTGGATGCATT
TCGATACGGAGCCGTAGAGGGATGTAATGCGTACTTCCTTAGTCACTTCC
ACAGCGACCATTACATCGGCCTGACGGGGTCGTGGCGCCATGGACCAATC
TACTGCAGCAGACCTACGGCCAACTTGGTGTGCCAGCAACTGAAGGTCGA
CCGGAAGTGGCTTGTACCACTTGAGTTCGAGCGGAAGACGGAAATCCCGG
ATACAGGAGGAGCGCAGGTGACTTTGATCGAGGCTAATCATTGTCCTGGG
AGCGCCATCTTTCTCTTCGAGAAATCAATGGGATCGGGTCCCTCGCAGAG
AACACATCGTGTCCTCCACTGTGGTGACTTTCGCGCCTCGCCGCTTCATG
TGCAACATGCCCTTCTCCGCCCGGAGATTGCTGACCCCGCAACCGGCAAG
GCTCGCCAGCAACGAATCGATGCCTGCTATCTGGACACTACATATTTGAG
CCCCAAGTATGCATTCCCTGGCCAGGAAGATGTCATACAAGCCTGCGCAG
AACTTTGCGTTGAGCTCGATGGGGACGCCAACGACACCAATGGACGAGCA
TTTGGACGACCAGTCAATGGAAAAAGCGGAATGCTGAGCAAGTTTGTTAC
GGCTGTGACTGGATCCCGCCCGTCTCCGACGCAAGACAGCCGCCCCCCTG
GCCGGCTATTGGTAGTAATAGGGACGTACAGCATCGGCAAAGAACGCATC
TGTCTGGGGATCGCACGGGCATTGAAGAGCAAGATCTACGCGACGCCAGC
TAAGCAGCGCGTCTGTGCGTGCCTCGAGGATGCTGAGCTGTCATCGCTGC
TGACAGACGATCCCACGGAGGCGCAGGTGCATATGCAAACGCTATTCGAG
ATCCGGGCGGAAACGCTGGCGGATTACCTGGACTCGATGAAGCCGCACTT
CACGCGGGTGGTGGGGTTTCGACCAACCGGGTGGACGTATCGCCCGCCAG
CTGGCCGAATGCTGGACAACCCACCGGTGTCGGTGGTGCTCAATTCGGCA
CATTGGAAGACGCCCTTTTCTGCGAAAGACCTGGTGCCACAGCGGGGGAG
TACGCGGGAAAGCGCATGCTTTGGAGTGCCGTACAGTGAGCACAGCTCAT
TTCGGGAGTTGAGCATGTTCTGCTGCGCACTCCGGATCGGACGGGTGATC
CCGACAGTGAACGTAGGTAGCCGGAAAAGTCGGGAGCGCATGAAGGCGTG
GATTGAGCGATGGGAGGCGGAGAAGCGGAAGAATGGGTTGTACCGCGTGG
AGGGGAATAGCTGGTAGGGAAGGGAATAGATGGCTCTACCAATGTCCAAA
GTACTGGTGGAACAGAAGGATCAGAAGGATTGCGAAAGACGGGTCGGAAC
ATGATGCCTAATAGAGTAAGTAAGGAGTTGGTGCTGTAACTAGTCACAAG
TTACGAGTTGTGTACATAACATCATTAGTCATGAAGATCAATTGCCTTTA
TGCTTCCGTAACTCTCGCCTCCCCGGAGTCACGAGATCAATAGAAACCAC
CGCCG back to topCoding sequence (CDS) from alignment at ch1:961543..964597+ >KJC3_000472-T1 ID=KJC3_000472-T1|Name=KJC3_000472-T1|organism=Aspergillus niger KJC3|type=CDS|length=5040bp|location=Sequence derived from alignment at ch1:961543..964597+ (Aspergillus niger KJC3)
ATGCCTACGCCGTTCCCTCCTAGAAAGCCCTCTACGCCGTCCCGCGCAAC
ACCCGCGAAGTCGAAAGCTACGAAACGCAATACCAGTCTTCTCAGTTTCT
TTCAGAAGGCGGACGGCCCGCCGAAAGCTACGTCCCGGCAATCGCGGATT
ACGCAATTCGCGACGAAGGCGGAGAGAAGTAATACTGGTAATGAGGGCTC
CTCGGGGGTGAGGGGTGGGAATGGGGCTGCTGGTGCCGGGGGTTTGTTTT
TGGAGGATGCCAAGAAGGTGGTTAGTCTTACGAGTGGAGGGGACTATGTC
AGGGAAAAGACACCGGAGGATATTTGGGAGGAAGAAGGAGAAGAAGAAGA
ACGGTTCCAGGAGAATGGGGGCAGTGTGAAGAAGAGGAGGGTTGGGGAAG
CTATTGCGCTGGAAGATGACATTGATAATGGGAGTGGGGAGGATAAGAAG
AGGAAGACGGAGAGTGAGAGTGGCACTGAGGAGAAGTCAAAGCCGAAGCC
GTCTCGATCAGTCAGTGGACCGTTCATTGATGAGTCGGATAGTGAGAGCG
AGGATCTTGAGCAGTTCAGGGAATACGAGAATGGGACTGAGAATGAGACC
GGGGTATTGGATGAGAAGACAAACTCGGCGGATGAAACCCGGACCCCCGC
AGTCGATGTCGACACACCACCGGTAAGAGAAGCCACGAGCCACGCCGATG
ATGATTACGCGAATTTTGACGATCTAGAAGAGGACGAGTTTCGAGGGGAA
GAAGACTTCTTAGGTGCATTTGACGACGATGAGGATTACAAGGGTGATAT
TGGATTTGATGATAGCGGGGTTTTGGGTGAAGATTTTGGATGCGAAGCGC
CGGTGTGTCCCGTATGTCAGGCTGTTTTGACAGGCTTGTCCGAGACGGAT
GTCTCGGTACATGTCAATGACTGTCTTGATGGGAAGCCTACGGAGTTGCT
GAAACACGAGCCAGAGGCGGAGGCAGACCCGGACCCGGAGCCGGGACCGG
AGCTAAAGACTACGAAAGGAATGAGCCTTGCGGACAGGGCTGCTATTGCG
AGACCAGCGCAGCGTGACCCATATGCCTCTGGGGTCGCAGGGACGAGGTC
GGCTTTTTCGAAGCTCATGGCCGGCAACGCGGAAGATACAGCATGGAGTG
CAGCGGCGGCGAACGAGGTTGCGTCCCGTGGCAAACAGGCGTATCAACGG
ACGTGTCCGTTCTACAAGATCATCCCTGGATTCTCCCTCTGTGTGGATGC
ATTTCGATACGGAGCCGTAGAGGGATGTAATGCGTACTTCCTTAGTCACT
TCCACAGCGACCATTACATCGGCCTGACGGGGTCGTGGCGCCATGGACCA
ATCTACTGCAGCAGACCTACGGCCAACTTGGTGTGCCAGCAACTGAAGGT
CGACCGGAAGTGGCTTGTACCACTTGAGTTCGAGCGGAAGACGGAAATCC
CGGATACAGGAGGAGCGCAGGTGACTTTGATCGAGGCTAATCATTGTCCT
GGGAGCGCCATCTTTCTCTTCGAGAAATCAATGGGATCGGGTCCCTCGCA
GAGAACACATCGTGTCCTCCACTGTGGTGACTTTCGCGCCTCGCCGCTTC
ATGTGCAACATGCCCTTCTCCGCCCGGAGATTGCTGACCCCGCAACCGGC
AAGGCTCGCCAGCAACGAATCGATGCCTGCTATCTGGACACTACATATTT
GAGCCCCAAGTATGCATTCCCTGGCCAGGAAGATGTCATACAAGCCTGCG
CAGAACTTTGCGTTGAGCTCGATGGGGACGCCAACGACACCAATGGACGA
GCATTTGGACGACCAGTCAATGGAAAAAGCGGAATGCTGAGCAAGTTTGT
TACGGCTGTGACTGGATCCCGCCCGTCTCCGACGCAAGACAGCCGCCCCC
CTGGCCGGCTATTGGTAGTAATAGGGACGTACAGCATCGGCAAAGAACGC
ATCTGTCTGGGGATCGCACGGGCATTGAAGAGCAAGATCTACGCGACGCC
AGCTAAGCAGCGCGTCTGTGCGTGCCTCGAGGATGCTGAGCTGTCATCGC
TGCTGACAGACGATCCCACGGAGGCGCAGGTGCATATGCAAACGCTATTC
GAGATCCGGGCGGAAACGCTGGCGGATTACCTGGACTCGATGAAGCCGCA
CTTCACGCGGGTGGTGGGGTTTCGACCAACCGGGTGGACGTATCGCCCGC
CAGCTGGCCGAATGCTGGACAACCCACCGGTGTCGGTGGTGCTCAATTCG
GCACATTGGAAGACGCCCTTTTCTGCGAAAGACCTGGTGCCACAGCGGGG
GAGTACGCGGGAAAGCGCATGCTTTGGAGTGCCGTACAGTGAGCACAGCT
CATTTCGGGAGTTGAGCATGTTCTGCTGCGCACTCCGGATCGGACGGGTG
ATCCCGACAGTGAACGTAGGTAGCCGGAAAAGTCGGGAGCGCATGAAGGC
GTGGATTGAGCGATGGGAGGCGGAGAAGCGGAAGAATGGGTTGTACCGCG
TGGAGGGGAATAGCTGGTAGATGCCTACGCCGTTCCCTCCTAGAAAGCCC
TCTACGCCGTCCCGCGCAACACCCGCGAAGTCGAAAGCTACGAAACGCAA
TACCAGTCTTCTCAGTTTCTTTCAGAAGGCGGACGGCCCGCCGAAAGCTA
CGTCCCGGCAATCGCGGATTACGCAATTCGCGACGAAGGCGGAGAGAAGT
AATACTGGTAATGAGGGCTCCTCGGGGGTGAGGGGTGGGAATGGGGCTGC
TGGTGCCGGGGGTTTGTTTTTGGAGGATGCCAAGAAGGTGGTTAGTCTTA
CGAGTGGAGGGGACTATGTCAGGGAAAAGACACCGGAGGATATTTGGGAG
GAAGAAGGAGAAGAAGAAGAACGGTTCCAGGAGAATGGGGGCAGTGTGAA
GAAGAGGAGGGTTGGGGAAGCTATTGCGCTGGAAGATGACATTGATAATG
GGAGTGGGGAGGATAAGAAGAGGAAGACGGAGAGTGAGAGTGGCACTGAG
GAGAAGTCAAAGCCGAAGCCGTCTCGATCAGTCAGTGGACCGTTCATTGA
TGAGTCGGATAGTGAGAGCGAGGATCTTGAGCAGTTCAGGGAATACGAGA
ATGGGACTGAGAATGAGACCGGGGTATTGGATGAGAAGACAAACTCGGCG
GATGAAACCCGGACCCCCGCAGTCGATGTCGACACACCACCGGTAAGAGA
AGCCACGAGCCACGCCGATGATGATTACGCGAATTTTGACGATCTAGAAG
AGGACGAGTTTCGAGGGGAAGAAGACTTCTTAGGTGCATTTGACGACGAT
GAGGATTACAAGGGTGATATTGGATTTGATGATAGCGGGGTTTTGGGTGA
AGATTTTGGATGCGAAGCGCCGGTGTGTCCCGTATGTCAGGCTGTTTTGA
CAGGCTTGTCCGAGACGGATGTCTCGGTACATGTCAATGACTGTCTTGAT
GGGAAGCCTACGGAGTTGCTGAAACACGAGCCAGAGGCGGAGGCAGACCC
GGACCCGGAGCCGGGACCGGAGCTAAAGACTACGAAAGGAATGAGCCTTG
CGGACAGGGCTGCTATTGCGAGACCAGCGCAGCGTGACCCATATGCCTCT
GGGGTCGCAGGGACGAGGTCGGCTTTTTCGAAGCTCATGGCCGGCAACGC
GGAAGATACAGCATGGAGTGCAGCGGCGGCGAACGAGGTTGCGTCCCGTG
GCAAACAGGCGTATCAACGGACGTGTCCGTTCTACAAGATCATCCCTGGA
TTCTCCCTCTGTGTGGATGCATTTCGATACGGAGCCGTAGAGGGATGTAA
TGCGTACTTCCTTAGTCACTTCCACAGCGACCATTACATCGGCCTGACGG
GGTCGTGGCGCCATGGACCAATCTACTGCAGCAGACCTACGGCCAACTTG
GTGTGCCAGCAACTGAAGGTCGACCGGAAGTGGCTTGTACCACTTGAGTT
CGAGCGGAAGACGGAAATCCCGGATACAGGAGGAGCGCAGGTGACTTTGA
TCGAGGCTAATCATTGTCCTGGGAGCGCCATCTTTCTCTTCGAGAAATCA
ATGGGATCGGGTCCCTCGCAGAGAACACATCGTGTCCTCCACTGTGGTGA
CTTTCGCGCCTCGCCGCTTCATGTGCAACATGCCCTTCTCCGCCCGGAGA
TTGCTGACCCCGCAACCGGCAAGGCTCGCCAGCAACGAATCGATGCCTGC
TATCTGGACACTACATATTTGAGCCCCAAGTATGCATTCCCTGGCCAGGA
AGATGTCATACAAGCCTGCGCAGAACTTTGCGTTGAGCTCGATGGGGACG
CCAACGACACCAATGGACGAGCATTTGGACGACCAGTCAATGGAAAAAGC
GGAATGCTGAGCAAGTTTGTTACGGCTGTGACTGGATCCCGCCCGTCTCC
GACGCAAGACAGCCGCCCCCCTGGCCGGCTATTGGTAGTAATAGGGACGT
ACAGCATCGGCAAAGAACGCATCTGTCTGGGGATCGCACGGGCATTGAAG
AGCAAGATCTACGCGACGCCAGCTAAGCAGCGCGTCTGTGCGTGCCTCGA
GGATGCTGAGCTGTCATCGCTGCTGACAGACGATCCCACGGAGGCGCAGG
TGCATATGCAAACGCTATTCGAGATCCGGGCGGAAACGCTGGCGGATTAC
CTGGACTCGATGAAGCCGCACTTCACGCGGGTGGTGGGGTTTCGACCAAC
CGGGTGGACGTATCGCCCGCCAGCTGGCCGAATGCTGGACAACCCACCGG
TGTCGGTGGTGCTCAATTCGGCACATTGGAAGACGCCCTTTTCTGCGAAA
GACCTGGTGCCACAGCGGGGGAGTACGCGGGAAAGCGCATGCTTTGGAGT
GCCGTACAGTGAGCACAGCTCATTTCGGGAGTTGAGCATGTTCTGCTGCG
CACTCCGGATCGGACGGGTGATCCCGACAGTGAACGTAGGTAGCCGGAAA
AGTCGGGAGCGCATGAAGGCGTGGATTGAGCGATGGGAGGCGGAGAAGCG
GAAGAATGGGTTGTACCGCGTGGAGGGGAATAGCTGGTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000472-T1.utr5p1 | KJC3_000472-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000472-T1.utr3p1 | KJC3_000472-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09261HQU |
| DBxref | InterPro:IPR011084 |
| DBxref | InterPro:IPR036866 |
| DBxref | PFAM:PF07522 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:961543..964597 + |
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