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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:967148..971708- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000474-T1 ID=KJC3_000474-T1|Name=KJC3_000474-T1|organism=Aspergillus niger KJC3|type=mRNA|length=4561bp|location=Sequence derived from alignment at ch1:967148..971708- (Aspergillus niger KJC3)
CGCAACTCGAGTGCTTCCGGGTCAACTACCCCTGCCACACACACACGCAC
ACATCCAGACACGCACTAAATGTGGGTTACATGGTATCAGCAAGGGGGTC
AATTTTTTAATAGTCAGGGGGAAGTTCGAGAATGAGGTTCTTCCCGCGTC
TCGATGGCGAAGTGCCATGTTCCATGTTTCCATGCAGCCCGGAAGGCTAA
CTGGGGACGGTGCATCCCGCCGTGCCGTTAGTGGCAGACGACGGGGTGGA
CCATCCAACTAAGCAGAAGAAGGCAGGTGCTAATTTAATTCACGTCGACA
TGATACACCTGGTCCACGACTAGTCTGGCATGGACCAATCTGGGGATTTA
CGGTGCCCATCCAATGTCCGGAAGTGCTCAGCTGCTTATCAGTGTCCCTC
CGTCCCCGCCCGCCCGAAAACAGTCCGCGCATTGTCCAATGGCTAAGGCT
GGTTTGTCATGTACTAGTGCATGATAACGGAAAAGCAAGACCAAACTGTG
GTCCTGATCAAGTCACTGTAGGATGGGATCTTCGTGTTCAGTGGCTTCGA
TAGCATCTGGCTGACCTGTCTTCCCCAGTCCACGGCGCGACCGAGTCGAT
CGACAAGAATTCTGCACGGGAAAGAGCAAAACACGAAGAATGCCACGCGA
TGAGAGAAGAACATCCAGAAAACCTCGGCTGAAGAGTTGCCAAGTCCAGA
CAACGCCCCATTGGCTTTCGCTGAAGCCGTGCGGATGATGGCTCGAACAC
AATTGCGCCCGCCAATTCGCCGTGTGAAGCCCGCCGGCGCTTCGCTAGCT
TATCGCAAACAAGCCTGGTGCAAAAGGGGCTAGTCCGCCGGACGAGACCC
GGGGAAAGTTGACCATCGTGCCTGCACTTCTGCTGCCGCCGTATCAGCGT
TGCTTTTTCCGCCGATATTCGTTGGTAATCATTTCTTTATCTCTTAGGCA
CTGGTTTGCATTGGAATCCCTCTTCGTCCAGCGCAACCACTTGCGTGGTC
TCGTTGCCCATCTTGCCACCACCCAACCCCCGATCCTTTCGCTCACATCC
GAGACATACCTCCGGTCAAAGGCTCACCCTTTCCTTCCCCTCCCCCTTCA
GACGTATTGCAGTCAGTCTAGTGGTAACTTGCTTGTTCTTTCCTGGTTTA
AATCGCCGAATCAAATGCACGTGTCTCTGGTCGCGTGCCAATTTCCATCA
ATGGGATCGTCCGAATGACCAAATCCCCACCTGGGTCGACTGCGATCGAG
CTCGCCCAGTGTACCAGTAATTCAGCTGGCTCACCGGACCGGATGGTGGA
CAGGTCTTCCTTTTGCCCCAATTTTTAGGTTCTGGGGCTAGTTCCTTCAC
CGGAGGGGCGCGCCTTATGCGCTTCGGTGCAACTTATCGGTCTGCGCGAA
ACTATGAGACTTTCTCATCAGATATTACCTAGGCAGCCAAATTGCAAGGG
AGGTTAGGGATGGGAGCATTCCCCGAGGACCGTGCATGTCGTGCATGGGC
TGACAATGGCAAATGCGCTCCAAGTCCGCCACTGGCTGGATCTACTAGCT
AACGCACGACTGGTTCCAAGTCCAATCCAGCTACTACCAAAGCTAAGACA
CATTCAGGTTACATCGGAACATGGCGAACAGACTGGGGTAACTGATAACT
GGGAGATAAACTCTCCCGCAATCAGTGGACGCCACCAGCTCGTTTAATTT
ATTTCCTAGTCCGATAAGGCGTCGGGTTACCGTCGGCTCTATTTGCGCCT
CTTGTCGTCGCTATCCAGGAGAGGGTAAATTGGGTGGTTATATGATGCTT
TCATCCGCCCCCCCTTTCTGTGTTCCCTTGTTTACTCCTCTGAAACAGTG
GATGAGTTCCGTGCATGCACTACTGTCTTCATTGATTTCCCCCAAAGCCT
TTTTTCGTGCTTCCCCTCATCAACTGCCGCGATGAGTGAGAAGGAGCAGG
CTTTCAGCACGGCGGTGGCTGATGAATCCTCCCCGGAGGCAGCCACCGTC
CATCTCAAGAACCTGAAGGAACAGCACCATTGGGATCCTAACCTCCCGGA
CGATATTGCCGACGAGATCGATGAGGCCCTCAATACGGATGACAAGGGTG
CCCGCGTGGGCATTACGCAGGAGCTCCTCGATAATTCGCCGTACCCCGAG
GTGCGTGCGGCCGTGCCCAACTACGATGAAGGAGGCCACACCAACACCAT
TCGTGCCTGGACCATTGGTTTGATCTTTGCGACCATTGGTTCGGCGCTTA
ACATGCTGTTCTCGATGCGTGACCCCTATATCGTCATTCCTTCCTACGTC
GCCCAGGTTGTCGCCTACCCTGTTGGTGTCGCATGGGCGAAATTCATCCC
CAGCAAGAAGTTCCGCTTCTTCGGAATCGAGTGCAACACGAACCCCGGTC
CCTTCAGCAAAAAGGAGCATTGTCTCATTGTCGTCATGGCCAATGCCACC
TTTGGTGGTGGTGCGGCTTATGCGACAGACGTCTTGTTGGCCCAGCGAGC
CTTCTACAAGCAGCGATTCGGATGGGCATTTGAAATCTTCATGTGTATCT
CGACCCAGATGCTCGGGTTTGGTATGGCTGGGTTCTTCCACCGCTTCCTG
GTCACTCCAGCTGCCATGATCTGGCCTTCCAATCTGATCAACTGCACCCT
CTTCTCGGCGCTTCATGACCACAGCCGACCCGATCCCAACAAGGTAGCCG
GTTGGAGGATTGGCAAGTACCGGTTCTTCCTCTACGTTATGATCGGGTCC
TTTTGCTGGTACTGGATCCCCGGTGTTATCGCTCCGTTCCTCAGTATCTT
CGCCTGGGTGACTTGGATCAAGCCCCAGAATGCCGTGGTCAACCAGCTCT
TTGGCGGGTCCACTGGTCTGTCTCTAATCCCTATGACCTTTGACTGGACG
CAAATCTCCGGCTTCAACTTCAGTCCCCTGATCGCGCCTTGGCATGCAAT
CGCCAACACCCTTATTGGTATGTTCATTTTCTTCTGGATCGTCACCATTG
GCATGCACTACAGCGGCATGTGGTGGTTCGAATACCTGCCCATGAGCGAT
TCGAACAGTTACGACAACACCGGTGCGCAGTACAATGTGTCCCGTATCAT
GACCAAGGACTTCACTCTCGATGTCCAGGCATACAAGGAATACTCGCCGC
TGTTCCTGTCCACAACCTTCAGTCTCTGCTACGGACTGTCGTTCGCGACC
ATCATTGCTATTCTGATCCACACTGGTCTGTTCCACGGTAAGGAACTGTG
GGTGCGTTTCCGCAACTTTGGCAAGGAAGAGGAGGATGTCCACGCCCGCC
TCATGTCCAAGTACAAGACGGTGCCCCTCTGGTGGTATGCCGCCATCACT
CTCATCATGATCGGAATCGGCTTGGGCATGGTCCTGGGATACCCGACACA
CCTGAGCTGGTGGGCGTTCTTTGTCTCTTTGATCATGGCATTGGTGTGGT
ACGTGCCAATTGGTATCGTGCAAGCCGCCACCAACATCGCCATTGGTCTG
AACGTCTTGACGGAGTTCATTGTCGGCTACATCCAGCCCGGAAAGCCCAT
GGCCATGATGTTGTTCAAGACCTACGGCTACATGAGCATGTACCAAGGTC
TCTACTTCAACCAGGACATGAAACTAGGTAAGCATCCTTATGCCATCCCC
CATACCTACCAGAAACCCCCGCACTAACCCTTCCACAGCGCACTACATGA
AATTGCCCCCACGAGTCACTTTCGCCGCCCAAATGATCGCTGCCCTCTGG
TCCTCCGTCGTCCAAATCGCCGTGATGAACTGGGGCCTCGCCACCATCAA
AGACGTCTGCAGCGAAACCCAAGCCGATAACTACAGCTGCCCCAACGGCC
GTGTGTTCTACCAGGCCTCCGTCATCTGGGGTCTTATCGGCCCCCAGCGC
ATCTTCTCCCCCGGCCAGCTCTACTCCGGCCTCATGTGGTTCTGGCTCGC
CGGCGCCATCCTTCCCGTCCTCATCTACATCGGCGCGCGCATGTACCCCA
AGAGCCAGATCCGCTTCCTCAACGCCCCGCTCATCTTCGGCGGAGCGGGT
CTGATCCCCCCCGCCACACCCCTCAACTACCTTACCTGGGGTATCGTGGG
TATCATCTTCAACAAGTACATCCGGGACCGCTGGCGCGGCTGGTGGATGC
ACTACAACTACGTTCTGTCTGCGGGTCTGGACGTCGGGTTGGATCTGTGT
ACCATCCTGATTTTCTTGACTCTCGATTTGACTAGTACTAGTTTCCCGAC
TTGGTGGGGTACTAGTATTACCGGTACTACTATGGATATGGCGGGTACTG
CAGTGCAGAAGATCCTGCCGAGTGGGCAGACGTTTGGACCAAAGAGCTGG
TAGTGAGTGGAGGGGTGTAGGGTATATGTTTGATTAGGGTGGGTGTGTTG
ATGATGATGATGATGAATGGTGGGTGGGACTTTCTGCTTCTTTTTGTGTA
TATGCTACGCAGCTATGATCACGACCTGTCTCTGCTAAGCTATTAAAATA
ATTCATAATGTGAATCCTGTGACATATTTTGCCTTGCATATTGGATCTTG
ATGATGACGAT back to topCoding sequence (CDS) from alignment at ch1:967148..971708- >KJC3_000474-T1 ID=KJC3_000474-T1|Name=KJC3_000474-T1|organism=Aspergillus niger KJC3|type=CDS|length=4722bp|location=Sequence derived from alignment at ch1:967148..971708- (Aspergillus niger KJC3)
CGCACTACATGAAATTGCCCCCACGAGTCACTTTCGCCGCCCAAATGATC
GCTGCCCTCTGGTCCTCCGTCGTCCAAATCGCCGTGATGAACTGGGGCCT
CGCCACCATCAAAGACGTCTGCAGCGAAACCCAAGCCGATAACTACAGCT
GCCCCAACGGCCGTGTGTTCTACCAGGCCTCCGTCATCTGGGGTCTTATC
GGCCCCCAGCGCATCTTCTCCCCCGGCCAGCTCTACTCCGGCCTCATGTG
GTTCTGGCTCGCCGGCGCCATCCTTCCCGTCCTCATCTACATCGGCGCGC
GCATGTACCCCAAGAGCCAGATCCGCTTCCTCAACGCCCCGCTCATCTTC
GGCGGAGCGGGTCTGATCCCCCCCGCCACACCCCTCAACTACCTTACCTG
GGGTATCGTGGGTATCATCTTCAACAAGTACATCCGGGACCGCTGGCGCG
GCTGGTGGATGCACTACAACTACGTTCTGTCTGCGGGTCTGGACGTCGGG
TTGGATCTGTGTACCATCCTGATTTTCTTGACTCTCGATTTGACTAGTAC
TAGTTTCCCGACTTGGTGGGGTACTAGTATTACCGGTACTACTATGGATA
TGGCGGGTACTGCAGTGCAGAAGATCCTGCCGAGTGGGCAGACGTTTGGA
CCAAAGAGCTGGTAGATGAGTGAGAAGGAGCAGGCTTTCAGCACGGCGGT
GGCTGATGAATCCTCCCCGGAGGCAGCCACCGTCCATCTCAAGAACCTGA
AGGAACAGCACCATTGGGATCCTAACCTCCCGGACGATATTGCCGACGAG
ATCGATGAGGCCCTCAATACGGATGACAAGGGTGCCCGCGTGGGCATTAC
GCAGGAGCTCCTCGATAATTCGCCGTACCCCGAGGTGCGTGCGGCCGTGC
CCAACTACGATGAAGGAGGCCACACCAACACCATTCGTGCCTGGACCATT
GGTTTGATCTTTGCGACCATTGGTTCGGCGCTTAACATGCTGTTCTCGAT
GCGTGACCCCTATATCGTCATTCCTTCCTACGTCGCCCAGGTTGTCGCCT
ACCCTGTTGGTGTCGCATGGGCGAAATTCATCCCCAGCAAGAAGTTCCGC
TTCTTCGGAATCGAGTGCAACACGAACCCCGGTCCCTTCAGCAAAAAGGA
GCATTGTCTCATTGTCGTCATGGCCAATGCCACCTTTGGTGGTGGTGCGG
CTTATGCGACAGACGTCTTGTTGGCCCAGCGAGCCTTCTACAAGCAGCGA
TTCGGATGGGCATTTGAAATCTTCATGTGTATCTCGACCCAGATGCTCGG
GTTTGGTATGGCTGGGTTCTTCCACCGCTTCCTGGTCACTCCAGCTGCCA
TGATCTGGCCTTCCAATCTGATCAACTGCACCCTCTTCTCGGCGCTTCAT
GACCACAGCCGACCCGATCCCAACAAGGTAGCCGGTTGGAGGATTGGCAA
GTACCGGTTCTTCCTCTACGTTATGATCGGGTCCTTTTGCTGGTACTGGA
TCCCCGGTGTTATCGCTCCGTTCCTCAGTATCTTCGCCTGGGTGACTTGG
ATCAAGCCCCAGAATGCCGTGGTCAACCAGCTCTTTGGCGGGTCCACTGG
TCTGTCTCTAATCCCTATGACCTTTGACTGGACGCAAATCTCCGGCTTCA
ACTTCAGTCCCCTGATCGCGCCTTGGCATGCAATCGCCAACACCCTTATT
GGTATGTTCATTTTCTTCTGGATCGTCACCATTGGCATGCACTACAGCGG
CATGTGGTGGTTCGAATACCTGCCCATGAGCGATTCGAACAGTTACGACA
ACACCGGTGCGCAGTACAATGTGTCCCGTATCATGACCAAGGACTTCACT
CTCGATGTCCAGGCATACAAGGAATACTCGCCGCTGTTCCTGTCCACAAC
CTTCAGTCTCTGCTACGGACTGTCGTTCGCGACCATCATTGCTATTCTGA
TCCACACTGGTCTGTTCCACGGTAAGGAACTGTGGGTGCGTTTCCGCAAC
TTTGGCAAGGAAGAGGAGGATGTCCACGCCCGCCTCATGTCCAAGTACAA
GACGGTGCCCCTCTGGTGGTATGCCGCCATCACTCTCATCATGATCGGAA
TCGGCTTGGGCATGGTCCTGGGATACCCGACACACCTGAGCTGGTGGGCG
TTCTTTGTCTCTTTGATCATGGCATTGGTGTGGTACGTGCCAATTGGTAT
CGTGCAAGCCGCCACCAACATCGCCATTGGTCTGAACGTCTTGACGGAGT
TCATTGTCGGCTACATCCAGCCCGGAAAGCCCATGGCCATGATGTTGTTC
AAGACCTACGGCTACATGAGCATGTACCAAGGTCTCTACTTCAACCAGGA
CATGAAACTAGCGCACTACATGAAATTGCCCCCACGAGTCACTTTCGCCG
CCCAAATGATCGCTGCCCTCTGGTCCTCCGTCGTCCAAATCGCCGTGATG
AACTGGGGCCTCGCCACCATCAAAGACGTCTGCAGCGAAACCCAAGCCGA
TAACTACAGCTGCCCCAACGGCCGTGTGTTCTACCAGGCCTCCGTCATCT
GGGGTCTTATCGGCCCCCAGCGCATCTTCTCCCCCGGCCAGCTCTACTCC
GGCCTCATGTGGTTCTGGCTCGCCGGCGCCATCCTTCCCGTCCTCATCTA
CATCGGCGCGCGCATGTACCCCAAGAGCCAGATCCGCTTCCTCAACGCCC
CGCTCATCTTCGGCGGAGCGGGTCTGATCCCCCCCGCCACACCCCTCAAC
TACCTTACCTGGGGTATCGTGGGTATCATCTTCAACAAGTACATCCGGGA
CCGCTGGCGCGGCTGGTGGATGCACTACAACTACGTTCTGTCTGCGGGTC
TGGACGTCGGGTTGGATCTGTGTACCATCCTGATTTTCTTGACTCTCGAT
TTGACTAGTACTAGTTTCCCGACTTGGTGGGGTACTAGTATTACCGGTAC
TACTATGGATATGGCGGGTACTGCAGTGCAGAAGATCCTGCCGAGTGGGC
AGACGTTTGGACCAAAGAGCTGGTAGATGAGTGAGAAGGAGCAGGCTTTC
AGCACGGCGGTGGCTGATGAATCCTCCCCGGAGGCAGCCACCGTCCATCT
CAAGAACCTGAAGGAACAGCACCATTGGGATCCTAACCTCCCGGACGATA
TTGCCGACGAGATCGATGAGGCCCTCAATACGGATGACAAGGGTGCCCGC
GTGGGCATTACGCAGGAGCTCCTCGATAATTCGCCGTACCCCGAGGTGCG
TGCGGCCGTGCCCAACTACGATGAAGGAGGCCACACCAACACCATTCGTG
CCTGGACCATTGGTTTGATCTTTGCGACCATTGGTTCGGCGCTTAACATG
CTGTTCTCGATGCGTGACCCCTATATCGTCATTCCTTCCTACGTCGCCCA
GGTTGTCGCCTACCCTGTTGGTGTCGCATGGGCGAAATTCATCCCCAGCA
AGAAGTTCCGCTTCTTCGGAATCGAGTGCAACACGAACCCCGGTCCCTTC
AGCAAAAAGGAGCATTGTCTCATTGTCGTCATGGCCAATGCCACCTTTGG
TGGTGGTGCGGCTTATGCGACAGACGTCTTGTTGGCCCAGCGAGCCTTCT
ACAAGCAGCGATTCGGATGGGCATTTGAAATCTTCATGTGTATCTCGACC
CAGATGCTCGGGTTTGGTATGGCTGGGTTCTTCCACCGCTTCCTGGTCAC
TCCAGCTGCCATGATCTGGCCTTCCAATCTGATCAACTGCACCCTCTTCT
CGGCGCTTCATGACCACAGCCGACCCGATCCCAACAAGGTAGCCGGTTGG
AGGATTGGCAAGTACCGGTTCTTCCTCTACGTTATGATCGGGTCCTTTTG
CTGGTACTGGATCCCCGGTGTTATCGCTCCGTTCCTCAGTATCTTCGCCT
GGGTGACTTGGATCAAGCCCCAGAATGCCGTGGTCAACCAGCTCTTTGGC
GGGTCCACTGGTCTGTCTCTAATCCCTATGACCTTTGACTGGACGCAAAT
CTCCGGCTTCAACTTCAGTCCCCTGATCGCGCCTTGGCATGCAATCGCCA
ACACCCTTATTGGTATGTTCATTTTCTTCTGGATCGTCACCATTGGCATG
CACTACAGCGGCATGTGGTGGTTCGAATACCTGCCCATGAGCGATTCGAA
CAGTTACGACAACACCGGTGCGCAGTACAATGTGTCCCGTATCATGACCA
AGGACTTCACTCTCGATGTCCAGGCATACAAGGAATACTCGCCGCTGTTC
CTGTCCACAACCTTCAGTCTCTGCTACGGACTGTCGTTCGCGACCATCAT
TGCTATTCTGATCCACACTGGTCTGTTCCACGGTAAGGAACTGTGGGTGC
GTTTCCGCAACTTTGGCAAGGAAGAGGAGGATGTCCACGCCCGCCTCATG
TCCAAGTACAAGACGGTGCCCCTCTGGTGGTATGCCGCCATCACTCTCAT
CATGATCGGAATCGGCTTGGGCATGGTCCTGGGATACCCGACACACCTGA
GCTGGTGGGCGTTCTTTGTCTCTTTGATCATGGCATTGGTGTGGTACGTG
CCAATTGGTATCGTGCAAGCCGCCACCAACATCGCCATTGGTCTGAACGT
CTTGACGGAGTTCATTGTCGGCTACATCCAGCCCGGAAAGCCCATGGCCA
TGATGTTGTTCAAGACCTACGGCTACATGAGCATGTACCAAGGTCTCTAC
TTCAACCAGGACATGAAACTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000474-T1.utr3p1 | KJC3_000474-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000474-T1.utr5p1 | KJC3_000474-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR004648 |
| DBxref | InterPro:IPR004813 |
| DBxref | PFAM:PF03169 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:967148..971708 - |
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