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KJC3_000476-T1, KJC3_000476-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_000476-T1
Unique NameKJC3_000476-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:977269..977970+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_000476-T1 ID=KJC3_000476-T1|Name=KJC3_000476-T1|organism=Aspergillus niger KJC3|type=mRNA|length=702bp|location=Sequence derived from alignment at ch1:977269..977970+ (Aspergillus niger KJC3)
ATGTCCTCTGAAATTCCAGATATCCCTGAATTGAAGCGCGCCGTGGAAAG
CGGCCAGCGCATTGACCCAGGGGATGTCTCTGCTCTGGCCCAGACCGAGA
GCGAATTGAGCGGTGGTGGGCCCATTAGAGGTGGAACAGCAGGTGCGTTC
ATACTACTTTTAGGCATTGATGCATTGTATTGACCCAAGCAAACAGCAAC
AGCACAAAGCCTGGCCATGAAGCAGATGAATCTCGACGCGAAATTAGAGG
CTTTATCGCGAAAGCCACAGAGCTACATAACACAGGATGATGCTCGGGAG
CTTCACGCGGCTGAGGTAAGGACATCATGGTTTTACTTCTCTCTGAGATA
AACAAAGAGATTTAATTCGCATGTCTGATGCAGGGCCGCGCCTTCAACAA
GCCACCCGGTCCCGGATCCGTCTCCGCGCAAGTCCAATCTATAGCCGATC
GCAATGAGGCCCTTGGAGTCCCTGCTGTACCGGGAGAGGCTCCTGTGTAC
ATTACGAAGGATGATGCGAGGGAGGCTCAACATGCTGAATCGACGATCTA
TGGCGGACAAAACCCACGGGGTGGGATTGCGGCACAGATGCAGGTAAGTG
AGAGTAGATGGATGGACCTGAGCGTCCCTGTCTGGTCTGGACTACAGCTA
ACAATTGGCCTAGAGTGCTGCTGATAAAATCGAACATGCTTATCAGGACT
GA
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Coding sequence (CDS) from alignment at ch1:977269..977970+

>KJC3_000476-T1 ID=KJC3_000476-T1|Name=KJC3_000476-T1|organism=Aspergillus niger KJC3|type=CDS|length=2040bp|location=Sequence derived from alignment at ch1:977269..977970+ (Aspergillus niger KJC3)
ATGTCCTCTGAAATTCCAGATATCCCTGAATTGAAGCGCGCCGTGGAAAG
CGGCCAGCGCATTGACCCAGGGGATGTCTCTGCTCTGGCCCAGACCGAGA
GCGAATTGAGCGGTGGTGGGCCCATTAGAGGTGGAACAGCAGCAACAGCA
CAAAGCCTGGCCATGAAGCAGATGAATCTCGACGCGAAATTAGAGGCTTT
ATCGCGAAAGCCACAGAGCTACATAACACAGGATGATGCTCGGGAGCTTC
ACGCGGCTGAGGGCCGCGCCTTCAACAAGCCACCCGGTCCCGGATCCGTC
TCCGCGCAAGTCCAATCTATAGCCGATCGCAATGAGGCCCTTGGAGTCCC
TGCTGTACCGGGAGAGGCTCCTGTGTACATTACGAAGGATGATGCGAGGG
AGGCTCAACATGCTGAATCGACGATCTATGGCGGACAAAACCCACGGGGT
GGGATTGCGGCACAGATGCAGAGTGCTGCTGATAAAATCGAACATGCTTA
TCAGGACTGAATGTCCTCTGAAATTCCAGATATCCCTGAATTGAAGCGCG
CCGTGGAAAGCGGCCAGCGCATTGACCCAGGGGATGTCTCTGCTCTGGCC
CAGACCGAGAGCGAATTGAGCGGTGGTGGGCCCATTAGAGGTGGAACAGC
AGCAACAGCACAAAGCCTGGCCATGAAGCAGATGAATCTCGACGCGAAAT
TAGAGGCTTTATCGCGAAAGCCACAGAGCTACATAACACAGGATGATGCT
CGGGAGCTTCACGCGGCTGAGGGCCGCGCCTTCAACAAGCCACCCGGTCC
CGGATCCGTCTCCGCGCAAGTCCAATCTATAGCCGATCGCAATGAGGCCC
TTGGAGTCCCTGCTGTACCGGGAGAGGCTCCTGTGTACATTACGAAGGAT
GATGCGAGGGAGGCTCAACATGCTGAATCGACGATCTATGGCGGACAAAA
CCCACGGGGTGGGATTGCGGCACAGATGCAGAGTGCTGCTGATAAAATCG
AACATGCTTATCAGGACTGAATGTCCTCTGAAATTCCAGATATCCCTGAA
TTGAAGCGCGCCGTGGAAAGCGGCCAGCGCATTGACCCAGGGGATGTCTC
TGCTCTGGCCCAGACCGAGAGCGAATTGAGCGGTGGTGGGCCCATTAGAG
GTGGAACAGCAGCAACAGCACAAAGCCTGGCCATGAAGCAGATGAATCTC
GACGCGAAATTAGAGGCTTTATCGCGAAAGCCACAGAGCTACATAACACA
GGATGATGCTCGGGAGCTTCACGCGGCTGAGGGCCGCGCCTTCAACAAGC
CACCCGGTCCCGGATCCGTCTCCGCGCAAGTCCAATCTATAGCCGATCGC
AATGAGGCCCTTGGAGTCCCTGCTGTACCGGGAGAGGCTCCTGTGTACAT
TACGAAGGATGATGCGAGGGAGGCTCAACATGCTGAATCGACGATCTATG
GCGGACAAAACCCACGGGGTGGGATTGCGGCACAGATGCAGAGTGCTGCT
GATAAAATCGAACATGCTTATCAGGACTGAATGTCCTCTGAAATTCCAGA
TATCCCTGAATTGAAGCGCGCCGTGGAAAGCGGCCAGCGCATTGACCCAG
GGGATGTCTCTGCTCTGGCCCAGACCGAGAGCGAATTGAGCGGTGGTGGG
CCCATTAGAGGTGGAACAGCAGCAACAGCACAAAGCCTGGCCATGAAGCA
GATGAATCTCGACGCGAAATTAGAGGCTTTATCGCGAAAGCCACAGAGCT
ACATAACACAGGATGATGCTCGGGAGCTTCACGCGGCTGAGGGCCGCGCC
TTCAACAAGCCACCCGGTCCCGGATCCGTCTCCGCGCAAGTCCAATCTAT
AGCCGATCGCAATGAGGCCCTTGGAGTCCCTGCTGTACCGGGAGAGGCTC
CTGTGTACATTACGAAGGATGATGCGAGGGAGGCTCAACATGCTGAATCG
ACGATCTATGGCGGACAAAACCCACGGGGTGGGATTGCGGCACAGATGCA
GAGTGCTGCTGATAAAATCGAACATGCTTATCAGGACTGA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_000476KJC3_000476Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000476-T1.exon1KJC3_000476-T1.exon1Aspergillus niger KJC3exon
KJC3_000476-T1.exon2KJC3_000476-T1.exon2Aspergillus niger KJC3exon
KJC3_000476-T1.exon3KJC3_000476-T1.exon3Aspergillus niger KJC3exon
KJC3_000476-T1.exon4KJC3_000476-T1.exon4Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000476-T1.cdsKJC3_000476-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000476-T1KJC3_000476-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR007011
DBxrefPFAM:PF04927
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:977269..977970 +
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