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KJC3_000478-T1, KJC3_000478-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_000478-T1
Unique NameKJC3_000478-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:985883..987506+

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_000478-T1 ID=KJC3_000478-T1|Name=KJC3_000478-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1624bp|location=Sequence derived from alignment at ch1:985883..987506+ (Aspergillus niger KJC3)
TGCTGTAATCTACTGGGTTTCAGTCTATTCAGGCAAGCTACCTACGTCTA
TTCAAGATGAATGACCATCCCCACCCCCTTCCCAAAAGCGTCAAAGTCCG
CTCCACCTGCAATGCCTGCCAACAAGCCAAGATCCGCTGCAGTCATGAGA
AGCCAGCCTGTCGACGGTGTCAGAAGCACAACATCGACTGTGTCTACAGT
ATATCGCGACGCTTAGGGCGACCAGCGAAGAAGAAAGATGCCGACGATGA
GAGCGATTATCGTCGAGATCGTGAGTTTCTAGACGGGCCTAGGAAGCAAG
ACTCGCGAGCGCGGAATTGTTCCAGGAACAGTCACGGCAATAATAACAGC
AGCAGCAACAGCAGAAAGAGAAGGATGAAGCTGGAGGATGAGCAAGAGAC
AGTGTTGGATGATACTCTCCTGCTCTTGGACAAGGCAGGTGGGAGTCAGA
GTGTCTTGGATCCTGTTGGTGCGATAGATCCGGTATCTAGTTTACCGGGT
GATTGCTTCTTGGATGGGGCTACTCCCACGGCTCTATGTAAGTGTCGCTC
TTGTGCCTGTTACTATATAGCTGTGTGATGTTGATTGAAACAGTCGCGGA
TAGTGGCTTCGACTTATTCTCCGATAGCTGGGTGCAAGAGTTCATTGCCA
ACCCGCCGGTCGATCTCGCGCCGGAAGGTTTACTCCTGGATTCAATTGTG
AGCAGTGTCAAGCCTGAAAGTACTGGCGGTCGTACTCCAGTAGACCCGAA
GCATATTTCGAGAGGTTTTATTCAGGATACACCATTCATCACACCCACGA
CCTTGGATAATAAGATTGGCATCATGGATGCTCCGTCGGAGGCAAAATAT
TTGAAAGAGGATCCGCTGGCTTGGTCGTTGCCGTTCTCGGCCATGGATAA
TTTCCCGACCAGACAGACAGCCACTGAGACAAATGCATTTGCTCAAGCTA
AGATGACAAAGAGGCCATACCTGTATGGCCTCCCTGCGGGTGAGATGATG
CCCGTATCAGCCGTGCTAGCACCACACGCATATCAATTTCAGTGTCATGA
GTACACGATCCAGGAATCGTTCAGGCAGATGTCGATCGCGATACGAATGG
GACCGTATATGTCGATTGACCATATTCTTCATTGTCAGCGTATGCTGCTG
AATGTATCCGACACAATTCTCAAATGTTGCGTCTGCTGCATCACGAAAAA
GGATATACTCATGGTCGTCGTTGTTAATATCGACAGTCTAATGACTAATT
TAGAGGCCATAACGACCGGGGAGGCCGGGCATACGCAGAGACTCCTGTAC
AACGGGTACCATGAGCATATGCTGCCGGACTGCAAGCAAGATGTTCCAGG
AAATATGGCAAGACGGTATCGGAGTGGTGGACTGCATTTCAGGAGTCAAA
TTGATGCGTGTCCATTGGTTGTCGGCAAGTTCTGCGTCCAGTCTGGTGAC
AAATTCTTTTGTATCCTGCAGATCTTGTACAGCCAGTTATCAGATCTGTT
GTCGACGGTCAAAAGAATAAATCTCTATACGCAGGAGTCATCGGCTCGCA
TATCATTGACTAGAGAGACTGAGAGGAGATTAGAGGAGGTCATGCTGCAG
ATGAAGAGGATGACCAGGGTGTAG
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Coding sequence (CDS) from alignment at ch1:985883..987506+

>KJC3_000478-T1 ID=KJC3_000478-T1|Name=KJC3_000478-T1|organism=Aspergillus niger KJC3|type=CDS|length=3024bp|location=Sequence derived from alignment at ch1:985883..987506+ (Aspergillus niger KJC3)
ATGAATGACCATCCCCACCCCCTTCCCAAAAGCGTCAAAGTCCGCTCCAC
CTGCAATGCCTGCCAACAAGCCAAGATCCGCTGCAGTCATGAGAAGCCAG
CCTGTCGACGGTGTCAGAAGCACAACATCGACTGTGTCTACAGTATATCG
CGACGCTTAGGGCGACCAGCGAAGAAGAAAGATGCCGACGATGAGAGCGA
TTATCGTCGAGATCGTGAGTTTCTAGACGGGCCTAGGAAGCAAGACTCGC
GAGCGCGGAATTGTTCCAGGAACAGTCACGGCAATAATAACAGCAGCAGC
AACAGCAGAAAGAGAAGGATGAAGCTGGAGGATGAGCAAGAGACAGTGTT
GGATGATACTCTCCTGCTCTTGGACAAGGCAGGTGGGAGTCAGAGTGTCT
TGGATCCTGTTGGTGCGATAGATCCGGTATCTAGTTTACCGGGTGATTGC
TTCTTGGATGGGGCTACTCCCACGGCTCTATTCGCGGATAGTGGCTTCGA
CTTATTCTCCGATAGCTGGGTGCAAGAGTTCATTGCCAACCCGCCGGTCG
ATCTCGCGCCGGAAGGTTTACTCCTGGATTCAATTGTGAGCAGTGTCAAG
CCTGAAAGTACTGGCGGTCGTACTCCAGTAGACCCGAAGCATATTTCGAG
AGGTTTTATTCAGGATACACCATTCATCACACCCACGACCTTGGATAATA
AGATTGGCATCATGGATGCTCCGTCGGAGGCAAAATATTTGAAAGAGGAT
CCGCTGGCTTGGTCGTTGCCGTTCTCGGCCATGGATAATTTCCCGACCAG
ACAGACAGCCACTGAGACAAATGCATTTGCTCAAGCTAAGATGACAAAGA
GGCCATACCTGTATGGCCTCCCTGCGGGTGAGATGATGCCCGTATCAGCC
GTGCTAGCACCACACGCATATCAATTTCAGTGTCATGAGTACACGATCCA
GGAATCGTTCAGGCAGATGTCGATCGCGATACGAATGGGACCGTATATGT
CGATTGACCATATTCTTCATTGTCAGCGTATGCTGCTGAATGTATCCGAC
ACAATTCTCAAATGTTGCGTCTGCTGCATCACGAAAAAGGATATACTCAT
GGTCGTCGTTGTTAATATCGACAGTCTAATGACTAATTTAGAGGCCATAA
CGACCGGGGAGGCCGGGCATACGCAGAGACTCCTGTACAACGGGTACCAT
GAGCATATGCTGCCGGACTGCAAGCAAGATGTTCCAGGAAATATGGCAAG
ACGGTATCGGAGTGGTGGACTGCATTTCAGGAGTCAAATTGATGCGTGTC
CATTGGTTGTCGGCAAGTTCTGCGTCCAGTCTGGTGACAAATTCTTTTGT
ATCCTGCAGATCTTGTACAGCCAGTTATCAGATCTGTTGTCGACGGTCAA
AAGAATAAATCTCTATACGCAGGAGTCATCGGCTCGCATATCATTGACTA
GAGAGACTGAGAGGAGATTAGAGGAGGTCATGCTGCAGATGAAGAGGATG
ACCAGGGTGTAGATGAATGACCATCCCCACCCCCTTCCCAAAAGCGTCAA
AGTCCGCTCCACCTGCAATGCCTGCCAACAAGCCAAGATCCGCTGCAGTC
ATGAGAAGCCAGCCTGTCGACGGTGTCAGAAGCACAACATCGACTGTGTC
TACAGTATATCGCGACGCTTAGGGCGACCAGCGAAGAAGAAAGATGCCGA
CGATGAGAGCGATTATCGTCGAGATCGTGAGTTTCTAGACGGGCCTAGGA
AGCAAGACTCGCGAGCGCGGAATTGTTCCAGGAACAGTCACGGCAATAAT
AACAGCAGCAGCAACAGCAGAAAGAGAAGGATGAAGCTGGAGGATGAGCA
AGAGACAGTGTTGGATGATACTCTCCTGCTCTTGGACAAGGCAGGTGGGA
GTCAGAGTGTCTTGGATCCTGTTGGTGCGATAGATCCGGTATCTAGTTTA
CCGGGTGATTGCTTCTTGGATGGGGCTACTCCCACGGCTCTATTCGCGGA
TAGTGGCTTCGACTTATTCTCCGATAGCTGGGTGCAAGAGTTCATTGCCA
ACCCGCCGGTCGATCTCGCGCCGGAAGGTTTACTCCTGGATTCAATTGTG
AGCAGTGTCAAGCCTGAAAGTACTGGCGGTCGTACTCCAGTAGACCCGAA
GCATATTTCGAGAGGTTTTATTCAGGATACACCATTCATCACACCCACGA
CCTTGGATAATAAGATTGGCATCATGGATGCTCCGTCGGAGGCAAAATAT
TTGAAAGAGGATCCGCTGGCTTGGTCGTTGCCGTTCTCGGCCATGGATAA
TTTCCCGACCAGACAGACAGCCACTGAGACAAATGCATTTGCTCAAGCTA
AGATGACAAAGAGGCCATACCTGTATGGCCTCCCTGCGGGTGAGATGATG
CCCGTATCAGCCGTGCTAGCACCACACGCATATCAATTTCAGTGTCATGA
GTACACGATCCAGGAATCGTTCAGGCAGATGTCGATCGCGATACGAATGG
GACCGTATATGTCGATTGACCATATTCTTCATTGTCAGCGTATGCTGCTG
AATGTATCCGACACAATTCTCAAATGTTGCGTCTGCTGCATCACGAAAAA
GGATATACTCATGGTCGTCGTTGTTAATATCGACAGTCTAATGACTAATT
TAGAGGCCATAACGACCGGGGAGGCCGGGCATACGCAGAGACTCCTGTAC
AACGGGTACCATGAGCATATGCTGCCGGACTGCAAGCAAGATGTTCCAGG
AAATATGGCAAGACGGTATCGGAGTGGTGGACTGCATTTCAGGAGTCAAA
TTGATGCGTGTCCATTGGTTGTCGGCAAGTTCTGCGTCCAGTCTGGTGAC
AAATTCTTTTGTATCCTGCAGATCTTGTACAGCCAGTTATCAGATCTGTT
GTCGACGGTCAAAAGAATAAATCTCTATACGCAGGAGTCATCGGCTCGCA
TATCATTGACTAGAGAGACTGAGAGGAGATTAGAGGAGGTCATGCTGCAG
ATGAAGAGGATGACCAGGGTGTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0042025host cell nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0008270zinc ion binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_000478KJC3_000478Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000478-T1.utr5p1KJC3_000478-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000478-T1.exon1KJC3_000478-T1.exon1Aspergillus niger KJC3exon
KJC3_000478-T1.exon2KJC3_000478-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000478-T1.cdsKJC3_000478-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000478-T1KJC3_000478-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR001138
DBxrefPFAM:PF00172
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:985883..987506 +
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