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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:997220..998688- Legend: polypeptideCDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000485-T1 ID=KJC3_000485-T1|Name=KJC3_000485-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1469bp|location=Sequence derived from alignment at ch1:997220..998688- (Aspergillus niger KJC3)
ATGGCCAGTGAAGGCCTTCCCAAGAGTCCGGATCTGTCCGATCCCGAGAC
TCAGTACATCTTGGAGGGCAATGCCAGATTTCGCCGGCTAGGATGGAAAC
GCCTCACAGTTATTTCCATAGTGGAGGCCATCGCTCTTGGGAGCTTGGGC
TTGCCTTCTGCCTTCGCGACTCTGGGCATGGTTGCCGGTGTCATCCTCAC
GATCGGTATCGGACTGGTAGCCATGTACGCGGGCTATAACATTGGACAAG
TGAAATTGAAGTACCCTGAGGTTGGGCACTACGCAGATGTCGGTCAGCTT
TTGCTGGGAAATATCGGAGGCAAAATATTCGTGGGCAGTTTTGTCGCCCT
ACTGGTCTTTGTTATCGGGTCTCACTGCTTGACGGGCGCAATTGCATTCC
AGACCATCACCGAAAGCAGCGTGTGTTCGGTGGTTTTCAGTGTTGTCTCC
GCTGCCATTCTGATGATCCTCGCCATTCCTCCGTCCTTTGCCGAAATTGC
CATTCTTGGTTATATCGATTTTGCTTCAATCATCCTGGCAATCGGCATCA
CTATGATTGCTACAGGCATTCAGAGCTCTAATTCCAGTGGTACCTTCTCC
GCCGATCATATCCCGTGGTCGGCATGGCCCATGGCTGGCATCACATTCTC
GCAGGCAATTGTGGCCACCAATAATATTGTCTTTGCTTATTCCTTCGCTG
GCTGCCTGCCTTCGTTCATGGAAGATATGCATACCCCGGAGGATTACGTC
AAAACCCTTTGGTGGCTAGGCGGCATTCAAATCGTCATATATACCTTGAC
GGGATCGCTTATCTACGCATTCGTGGGCCAGGGGGTGGAATCACCCGCGC
TGCTATCAGCCGGACCAGTCATTTCAAGAGTGGTTTTCGGCATAGCCCTG
CCAGTTATCTTCATCTCCGGCTCCATCAACGTGACAGTCGTCTGCCGATA
CATTCACGGCAAGTTCTACCATGACTCGGCCGCCCGCTTCATCAACACCC
GTAAAGGCTGGATGACTTGGTTGGCTCTTATATCCCTTATTACTGCTCTC
GCTTGGGTCATTGCAGAGGCTATTCCGATTTTCTCGGAGCTGCTTTCCAT
CATCTCGGCGCTTTTTGTGTCCGGTCTGTCGTTTTACATTCCTCCGGTGA
TGTGGTTTGTGCTGTTGAGGGATGGGGCTTGGTACGAGAAACACAACCTA
AAGCCTGCGATCTGTAACCTGGTGGTCTTTATTGTCGGTGTGATTGTTTT
CGGTTGCGGTACTTATTCTAGTATTGCAGAGCTGGTAGGTGGTTTCCCTG
CGGACATGGAAAATCTCATGCTAACGTGATAATCATAGGTTAATGAGTTT
CGGTCGGGGGAGATAAGTAAACCTTTCACGTGCTAGGACGTTTAAAGCTA
CGATATGATTATACATTGTGATGTACCGTGAGAGACAGATGGTACTGTCT
GTCCATGCCGGTCGGGCAC back to topCoding sequence (CDS) from alignment at ch1:997220..998688- >KJC3_000485-T1 ID=KJC3_000485-T1|Name=KJC3_000485-T1|organism=Aspergillus niger KJC3|type=CDS|length=2664bp|location=Sequence derived from alignment at ch1:997220..998688- (Aspergillus niger KJC3)
GTTAATGAGTTTCGGTCGGGGGAGATAAGTAAACCTTTCACGTGCTAGAT
GGCCAGTGAAGGCCTTCCCAAGAGTCCGGATCTGTCCGATCCCGAGACTC
AGTACATCTTGGAGGGCAATGCCAGATTTCGCCGGCTAGGATGGAAACGC
CTCACAGTTATTTCCATAGTGGAGGCCATCGCTCTTGGGAGCTTGGGCTT
GCCTTCTGCCTTCGCGACTCTGGGCATGGTTGCCGGTGTCATCCTCACGA
TCGGTATCGGACTGGTAGCCATGTACGCGGGCTATAACATTGGACAAGTG
AAATTGAAGTACCCTGAGGTTGGGCACTACGCAGATGTCGGTCAGCTTTT
GCTGGGAAATATCGGAGGCAAAATATTCGTGGGCAGTTTTGTCGCCCTAC
TGGTCTTTGTTATCGGGTCTCACTGCTTGACGGGCGCAATTGCATTCCAG
ACCATCACCGAAAGCAGCGTGTGTTCGGTGGTTTTCAGTGTTGTCTCCGC
TGCCATTCTGATGATCCTCGCCATTCCTCCGTCCTTTGCCGAAATTGCCA
TTCTTGGTTATATCGATTTTGCTTCAATCATCCTGGCAATCGGCATCACT
ATGATTGCTACAGGCATTCAGAGCTCTAATTCCAGTGGTACCTTCTCCGC
CGATCATATCCCGTGGTCGGCATGGCCCATGGCTGGCATCACATTCTCGC
AGGCAATTGTGGCCACCAATAATATTGTCTTTGCTTATTCCTTCGCTGGC
TGCCTGCCTTCGTTCATGGAAGATATGCATACCCCGGAGGATTACGTCAA
AACCCTTTGGTGGCTAGGCGGCATTCAAATCGTCATATATACCTTGACGG
GATCGCTTATCTACGCATTCGTGGGCCAGGGGGTGGAATCACCCGCGCTG
CTATCAGCCGGACCAGTCATTTCAAGAGTGGTTTTCGGCATAGCCCTGCC
AGTTATCTTCATCTCCGGCTCCATCAACGTGACAGTCGTCTGCCGATACA
TTCACGGCAAGTTCTACCATGACTCGGCCGCCCGCTTCATCAACACCCGT
AAAGGCTGGATGACTTGGTTGGCTCTTATATCCCTTATTACTGCTCTCGC
TTGGGTCATTGCAGAGGCTATTCCGATTTTCTCGGAGCTGCTTTCCATCA
TCTCGGCGCTTTTTGTGTCCGGTCTGTCGTTTTACATTCCTCCGGTGATG
TGGTTTGTGCTGTTGAGGGATGGGGCTTGGTACGAGAAACACAACCTAAA
GCCTGCGATCTGTAACCTGGTGGTCTTTATTGTCGGTGTGATTGTTTTCG
GTTGCGGTACTTATTCTAGTATTGCAGAGCTGGTTAATGAGTTTCGGTCG
GGGGAGATAAGTAAACCTTTCACGTGCTAGATGGCCAGTGAAGGCCTTCC
CAAGAGTCCGGATCTGTCCGATCCCGAGACTCAGTACATCTTGGAGGGCA
ATGCCAGATTTCGCCGGCTAGGATGGAAACGCCTCACAGTTATTTCCATA
GTGGAGGCCATCGCTCTTGGGAGCTTGGGCTTGCCTTCTGCCTTCGCGAC
TCTGGGCATGGTTGCCGGTGTCATCCTCACGATCGGTATCGGACTGGTAG
CCATGTACGCGGGCTATAACATTGGACAAGTGAAATTGAAGTACCCTGAG
GTTGGGCACTACGCAGATGTCGGTCAGCTTTTGCTGGGAAATATCGGAGG
CAAAATATTCGTGGGCAGTTTTGTCGCCCTACTGGTCTTTGTTATCGGGT
CTCACTGCTTGACGGGCGCAATTGCATTCCAGACCATCACCGAAAGCAGC
GTGTGTTCGGTGGTTTTCAGTGTTGTCTCCGCTGCCATTCTGATGATCCT
CGCCATTCCTCCGTCCTTTGCCGAAATTGCCATTCTTGGTTATATCGATT
TTGCTTCAATCATCCTGGCAATCGGCATCACTATGATTGCTACAGGCATT
CAGAGCTCTAATTCCAGTGGTACCTTCTCCGCCGATCATATCCCGTGGTC
GGCATGGCCCATGGCTGGCATCACATTCTCGCAGGCAATTGTGGCCACCA
ATAATATTGTCTTTGCTTATTCCTTCGCTGGCTGCCTGCCTTCGTTCATG
GAAGATATGCATACCCCGGAGGATTACGTCAAAACCCTTTGGTGGCTAGG
CGGCATTCAAATCGTCATATATACCTTGACGGGATCGCTTATCTACGCAT
TCGTGGGCCAGGGGGTGGAATCACCCGCGCTGCTATCAGCCGGACCAGTC
ATTTCAAGAGTGGTTTTCGGCATAGCCCTGCCAGTTATCTTCATCTCCGG
CTCCATCAACGTGACAGTCGTCTGCCGATACATTCACGGCAAGTTCTACC
ATGACTCGGCCGCCCGCTTCATCAACACCCGTAAAGGCTGGATGACTTGG
TTGGCTCTTATATCCCTTATTACTGCTCTCGCTTGGGTCATTGCAGAGGC
TATTCCGATTTTCTCGGAGCTGCTTTCCATCATCTCGGCGCTTTTTGTGT
CCGGTCTGTCGTTTTACATTCCTCCGGTGATGTGGTTTGTGCTGTTGAGG
GATGGGGCTTGGTACGAGAAACACAACCTAAAGCCTGCGATCTGTAACCT
GGTGGTCTTTATTGTCGGTGTGATTGTTTTCGGTTGCGGTACTTATTCTA
GTATTGCAGAGCTG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000485-T1.utr3p1 | KJC3_000485-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR013057 |
| DBxref | PFAM:PF01490 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:997220..998688 - |
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