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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:1027490..1029222+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000496-T1 ID=KJC3_000496-T1|Name=KJC3_000496-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1733bp|location=Sequence derived from alignment at ch1:1027490..1029222+ (Aspergillus niger KJC3) ATGAGAACTGTCGCCCGGGTCTTTACGGCCCCTGTGGAAAGCGAAAAGGA
GACGCTTCTGGCGCTGCTTCCGCAATACGGGCTCAAACTAGCCCCGGACG
GGATCCATATCCAGTGGGCTCTGGGCAATTGCCGACATCCGCGAAACTGG
AGCTTGCAACGTAAGGTCTATGATACCACTCTTATTATTTTCCTGGAATT
TTTCACGTAAGAGGCTCCCCGATCTTGATGGTGTTTAAACTAATTGTTCC
AGGACTGCCATTAGCACTGCCGGCGTAGGTAATAAAATGTTATCACGGGT
GTCCACTTGCTGAATATATAGTCAACTGCGGCCAACAATGCCGTCCACGA
CTTCAAGATCTCCAAAACCCTGTCAATCTTCCTTTTCGTCTCCATGTCAG
TATACCTCTTCTTTTCTCTTCAAATACCCCAGTCTGACTTCTTAGATATC
TTATCGGCCAAGCCATCGGGGGTGTCGTGTTCCCCCCATACTCTGAAGTA
TTTGGCCGGAAGAAGCTCTATGTGGCAAGCTCAGCCCTATACGGCATGTC
ATGCATCCTGATTGCATCCGTACCATCATTGATAGGAGTAGCGATGGGCC
GATGTCTCTGCGGGTTTCTGTCCGCCATCCCCACGACTGTTGTAGTGGGC
AGCATTGAAGACACCTTCAATTCCCGCGAGCGAGTCTGGGTAATCTGCCT
TTGGACCATGTTCGCCAATCTGGGCCTCGTCGTGGGTCCTATCCTCAGTA
CCTTTGTCGTGGCCTACACCCACTGGTATCTACTTCCTTTCCCCAGCATC
TGCCAATATATTCACTAACACTCCACAAGGAGATGGCTTTTTTACATCGC
AGCCATCGTAACCGGAGTCCTCACCCTCCTACTCCTCACTATACACGAAT
CTCGTCCCTCCCTCCTCCTTGCCCGCGAAGTCGCCACTCTTCGAAAGGTC
ACCAAAATCGACACCTTGGAAGGTCTCAACCCGGATAAAGCCCCGGACAT
GCGCAGCTTCGTCCGCATCGCGCTCTTCCGCCCCATCCGCCTCCTCTTCA
CCGAGCTCATTGTCTCCGTCGTCTCCATCATCAGCGCCGTCGCCATCGCC
CTAGTCTACCTTTTCACCGAAGCCCTTCCCCCGATCTACGAATCCTTCGG
CTTCACCCGAAAACAAGCCTGCCTTCCCTTCATGGCCATCGGACTAGGTC
TCTCCCTCGGTCTCCTCACCCGCTGTCTCGACCTCCGCATCATCACCCAC
CACCGAGCCCAAGGCCGACCACTGCTCCCCGAAGACAAATTGACCGGGTT
CTGGATCGGCGCACCCATACTCGCTGTAGCGTTATGGCTTTTTGCCTGGA
CCATTCCTCCCGCTGTCACGAATCTCCCTTGGCTTGTGTCGGTCGCAGCT
CTCGTGCTGGCTGGGTATAGTCTCAATGAGATGGACTACGTGCTGGGCGG
GTATCTGACGGATAGTTATCTCAGCTATGCGGCGAGTGGTCTGGCGGCAT
TGAGTCTGGTGAGGGCATTGTTGTCTGCTGCGTTGCCACTTATCTCGGCG
CCTATGTTGGAGCGACTCGGGGCTAATTATAGTGTTTCGGTGTTGGCCGC
CGTAGCGACGGTATTTTGTGCTGTGCCGCCGTTATTTTCGAGGTACGGGA
GGAGGATTAGGGCGAGGAGTGCGTTTGCAAGGTTTAGTTTAACAGTGTAT
CGCGAGTATAGTGTTGATGAGGAGGGGTATTAG back to topCoding sequence (CDS) from alignment at ch1:1027490..1029222+ >KJC3_000496-T1 ID=KJC3_000496-T1|Name=KJC3_000496-T1|organism=Aspergillus niger KJC3|type=CDS|length=7680bp|location=Sequence derived from alignment at ch1:1027490..1029222+ (Aspergillus niger KJC3) ATGAGAACTGTCGCCCGGGTCTTTACGGCCCCTGTGGAAAGCGAAAAGGA GACGCTTCTGGCGCTGCTTCCGCAATACGGGCTCAAACTAGCCCCGGACG GGATCCATATCCAGTGGGCTCTGGGCAATTGCCGACATCCGCGAAACTGG AGCTTGCAACGTAAGGTCTATGATACCACTCTTATTATTTTCCTGGAATT TTTCACGACTGCCATTAGCACTGCCGGCTCAACTGCGGCCAACAATGCCG TCCACGACTTCAAGATCTCCAAAACCCTGTCAATCTTCCTTTTCGTCTCC ATATATCTTATCGGCCAAGCCATCGGGGGTGTCGTGTTCCCCCCATACTC TGAAGTATTTGGCCGGAAGAAGCTCTATGTGGCAAGCTCAGCCCTATACG GCATGTCATGCATCCTGATTGCATCCGTACCATCATTGATAGGAGTAGCG ATGGGCCGATGTCTCTGCGGGTTTCTGTCCGCCATCCCCACGACTGTTGT AGTGGGCAGCATTGAAGACACCTTCAATTCCCGCGAGCGAGTCTGGGTAA TCTGCCTTTGGACCATGTTCGCCAATCTGGGCCTCGTCGTGGGTCCTATC CTCAGTACCTTTGTCGTGGCCTACACCCACTGGAGATGGCTTTTTTACAT CGCAGCCATCGTAACCGGAGTCCTCACCCTCCTACTCCTCACTATACACG AATCTCGTCCCTCCCTCCTCCTTGCCCGCGAAGTCGCCACTCTTCGAAAG GTCACCAAAATCGACACCTTGGAAGGTCTCAACCCGGATAAAGCCCCGGA CATGCGCAGCTTCGTCCGCATCGCGCTCTTCCGCCCCATCCGCCTCCTCT TCACCGAGCTCATTGTCTCCGTCGTCTCCATCATCAGCGCCGTCGCCATC GCCCTAGTCTACCTTTTCACCGAAGCCCTTCCCCCGATCTACGAATCCTT CGGCTTCACCCGAAAACAAGCCTGCCTTCCCTTCATGGCCATCGGACTAG GTCTCTCCCTCGGTCTCCTCACCCGCTGTCTCGACCTCCGCATCATCACC CACCACCGAGCCCAAGGCCGACCACTGCTCCCCGAAGACAAATTGACCGG GTTCTGGATCGGCGCACCCATACTCGCTGTAGCGTTATGGCTTTTTGCCT GGACCATTCCTCCCGCTGTCACGAATCTCCCTTGGCTTGTGTCGGTCGCA GCTCTCGTGCTGGCTGGGTATAGTCTCAATGAGATGGACTACGTGCTGGG CGGGTATCTGACGGATAGTTATCTCAGCTATGCGGCGAGTGGTCTGGCGG CATTGAGTCTGGTGAGGGCATTGTTGTCTGCTGCGTTGCCACTTATCTCG GCGCCTATGTTGGAGCGACTCGGGGCTAATTATAGTGTTTCGGTGTTGGC CGCCGTAGCGACGGTATTTTGTGCTGTGCCGCCGTTATTTTCGAGGTACG GGAGGAGGATTAGGGCGAGGAGTGCGTTTGCAAGGTTTAGTTTAACAGTG TATCGCGAGTATAGTGTTGATGAGGAGGGGTATTAGATGAGAACTGTCGC CCGGGTCTTTACGGCCCCTGTGGAAAGCGAAAAGGAGACGCTTCTGGCGC TGCTTCCGCAATACGGGCTCAAACTAGCCCCGGACGGGATCCATATCCAG TGGGCTCTGGGCAATTGCCGACATCCGCGAAACTGGAGCTTGCAACGTAA GGTCTATGATACCACTCTTATTATTTTCCTGGAATTTTTCACGACTGCCA TTAGCACTGCCGGCTCAACTGCGGCCAACAATGCCGTCCACGACTTCAAG ATCTCCAAAACCCTGTCAATCTTCCTTTTCGTCTCCATATATCTTATCGG CCAAGCCATCGGGGGTGTCGTGTTCCCCCCATACTCTGAAGTATTTGGCC GGAAGAAGCTCTATGTGGCAAGCTCAGCCCTATACGGCATGTCATGCATC CTGATTGCATCCGTACCATCATTGATAGGAGTAGCGATGGGCCGATGTCT CTGCGGGTTTCTGTCCGCCATCCCCACGACTGTTGTAGTGGGCAGCATTG AAGACACCTTCAATTCCCGCGAGCGAGTCTGGGTAATCTGCCTTTGGACC ATGTTCGCCAATCTGGGCCTCGTCGTGGGTCCTATCCTCAGTACCTTTGT CGTGGCCTACACCCACTGGAGATGGCTTTTTTACATCGCAGCCATCGTAA CCGGAGTCCTCACCCTCCTACTCCTCACTATACACGAATCTCGTCCCTCC CTCCTCCTTGCCCGCGAAGTCGCCACTCTTCGAAAGGTCACCAAAATCGA CACCTTGGAAGGTCTCAACCCGGATAAAGCCCCGGACATGCGCAGCTTCG TCCGCATCGCGCTCTTCCGCCCCATCCGCCTCCTCTTCACCGAGCTCATT GTCTCCGTCGTCTCCATCATCAGCGCCGTCGCCATCGCCCTAGTCTACCT TTTCACCGAAGCCCTTCCCCCGATCTACGAATCCTTCGGCTTCACCCGAA AACAAGCCTGCCTTCCCTTCATGGCCATCGGACTAGGTCTCTCCCTCGGT CTCCTCACCCGCTGTCTCGACCTCCGCATCATCACCCACCACCGAGCCCA AGGCCGACCACTGCTCCCCGAAGACAAATTGACCGGGTTCTGGATCGGCG CACCCATACTCGCTGTAGCGTTATGGCTTTTTGCCTGGACCATTCCTCCC GCTGTCACGAATCTCCCTTGGCTTGTGTCGGTCGCAGCTCTCGTGCTGGC TGGGTATAGTCTCAATGAGATGGACTACGTGCTGGGCGGGTATCTGACGG ATAGTTATCTCAGCTATGCGGCGAGTGGTCTGGCGGCATTGAGTCTGGTG AGGGCATTGTTGTCTGCTGCGTTGCCACTTATCTCGGCGCCTATGTTGGA GCGACTCGGGGCTAATTATAGTGTTTCGGTGTTGGCCGCCGTAGCGACGG TATTTTGTGCTGTGCCGCCGTTATTTTCGAGGTACGGGAGGAGGATTAGG GCGAGGAGTGCGTTTGCAAGGTTTAGTTTAACAGTGTATCGCGAGTATAG TGTTGATGAGGAGGGGTATTAGATGAGAACTGTCGCCCGGGTCTTTACGG CCCCTGTGGAAAGCGAAAAGGAGACGCTTCTGGCGCTGCTTCCGCAATAC GGGCTCAAACTAGCCCCGGACGGGATCCATATCCAGTGGGCTCTGGGCAA TTGCCGACATCCGCGAAACTGGAGCTTGCAACGTAAGGTCTATGATACCA CTCTTATTATTTTCCTGGAATTTTTCACGACTGCCATTAGCACTGCCGGC TCAACTGCGGCCAACAATGCCGTCCACGACTTCAAGATCTCCAAAACCCT GTCAATCTTCCTTTTCGTCTCCATATATCTTATCGGCCAAGCCATCGGGG GTGTCGTGTTCCCCCCATACTCTGAAGTATTTGGCCGGAAGAAGCTCTAT GTGGCAAGCTCAGCCCTATACGGCATGTCATGCATCCTGATTGCATCCGT ACCATCATTGATAGGAGTAGCGATGGGCCGATGTCTCTGCGGGTTTCTGT CCGCCATCCCCACGACTGTTGTAGTGGGCAGCATTGAAGACACCTTCAAT TCCCGCGAGCGAGTCTGGGTAATCTGCCTTTGGACCATGTTCGCCAATCT GGGCCTCGTCGTGGGTCCTATCCTCAGTACCTTTGTCGTGGCCTACACCC ACTGGAGATGGCTTTTTTACATCGCAGCCATCGTAACCGGAGTCCTCACC CTCCTACTCCTCACTATACACGAATCTCGTCCCTCCCTCCTCCTTGCCCG CGAAGTCGCCACTCTTCGAAAGGTCACCAAAATCGACACCTTGGAAGGTC TCAACCCGGATAAAGCCCCGGACATGCGCAGCTTCGTCCGCATCGCGCTC TTCCGCCCCATCCGCCTCCTCTTCACCGAGCTCATTGTCTCCGTCGTCTC CATCATCAGCGCCGTCGCCATCGCCCTAGTCTACCTTTTCACCGAAGCCC TTCCCCCGATCTACGAATCCTTCGGCTTCACCCGAAAACAAGCCTGCCTT CCCTTCATGGCCATCGGACTAGGTCTCTCCCTCGGTCTCCTCACCCGCTG TCTCGACCTCCGCATCATCACCCACCACCGAGCCCAAGGCCGACCACTGC TCCCCGAAGACAAATTGACCGGGTTCTGGATCGGCGCACCCATACTCGCT GTAGCGTTATGGCTTTTTGCCTGGACCATTCCTCCCGCTGTCACGAATCT CCCTTGGCTTGTGTCGGTCGCAGCTCTCGTGCTGGCTGGGTATAGTCTCA ATGAGATGGACTACGTGCTGGGCGGGTATCTGACGGATAGTTATCTCAGC TATGCGGCGAGTGGTCTGGCGGCATTGAGTCTGGTGAGGGCATTGTTGTC TGCTGCGTTGCCACTTATCTCGGCGCCTATGTTGGAGCGACTCGGGGCTA ATTATAGTGTTTCGGTGTTGGCCGCCGTAGCGACGGTATTTTGTGCTGTG CCGCCGTTATTTTCGAGGTACGGGAGGAGGATTAGGGCGAGGAGTGCGTT TGCAAGGTTTAGTTTAACAGTGTATCGCGAGTATAGTGTTGATGAGGAGG GGTATTAGATGAGAACTGTCGCCCGGGTCTTTACGGCCCCTGTGGAAAGC GAAAAGGAGACGCTTCTGGCGCTGCTTCCGCAATACGGGCTCAAACTAGC CCCGGACGGGATCCATATCCAGTGGGCTCTGGGCAATTGCCGACATCCGC GAAACTGGAGCTTGCAACGTAAGGTCTATGATACCACTCTTATTATTTTC CTGGAATTTTTCACGACTGCCATTAGCACTGCCGGCTCAACTGCGGCCAA CAATGCCGTCCACGACTTCAAGATCTCCAAAACCCTGTCAATCTTCCTTT TCGTCTCCATATATCTTATCGGCCAAGCCATCGGGGGTGTCGTGTTCCCC CCATACTCTGAAGTATTTGGCCGGAAGAAGCTCTATGTGGCAAGCTCAGC CCTATACGGCATGTCATGCATCCTGATTGCATCCGTACCATCATTGATAG GAGTAGCGATGGGCCGATGTCTCTGCGGGTTTCTGTCCGCCATCCCCACG ACTGTTGTAGTGGGCAGCATTGAAGACACCTTCAATTCCCGCGAGCGAGT CTGGGTAATCTGCCTTTGGACCATGTTCGCCAATCTGGGCCTCGTCGTGG GTCCTATCCTCAGTACCTTTGTCGTGGCCTACACCCACTGGAGATGGCTT TTTTACATCGCAGCCATCGTAACCGGAGTCCTCACCCTCCTACTCCTCAC TATACACGAATCTCGTCCCTCCCTCCTCCTTGCCCGCGAAGTCGCCACTC TTCGAAAGGTCACCAAAATCGACACCTTGGAAGGTCTCAACCCGGATAAA GCCCCGGACATGCGCAGCTTCGTCCGCATCGCGCTCTTCCGCCCCATCCG CCTCCTCTTCACCGAGCTCATTGTCTCCGTCGTCTCCATCATCAGCGCCG TCGCCATCGCCCTAGTCTACCTTTTCACCGAAGCCCTTCCCCCGATCTAC GAATCCTTCGGCTTCACCCGAAAACAAGCCTGCCTTCCCTTCATGGCCAT CGGACTAGGTCTCTCCCTCGGTCTCCTCACCCGCTGTCTCGACCTCCGCA TCATCACCCACCACCGAGCCCAAGGCCGACCACTGCTCCCCGAAGACAAA TTGACCGGGTTCTGGATCGGCGCACCCATACTCGCTGTAGCGTTATGGCT TTTTGCCTGGACCATTCCTCCCGCTGTCACGAATCTCCCTTGGCTTGTGT CGGTCGCAGCTCTCGTGCTGGCTGGGTATAGTCTCAATGAGATGGACTAC GTGCTGGGCGGGTATCTGACGGATAGTTATCTCAGCTATGCGGCGAGTGG TCTGGCGGCATTGAGTCTGGTGAGGGCATTGTTGTCTGCTGCGTTGCCAC TTATCTCGGCGCCTATGTTGGAGCGACTCGGGGCTAATTATAGTGTTTCG GTGTTGGCCGCCGTAGCGACGGTATTTTGTGCTGTGCCGCCGTTATTTTC GAGGTACGGGAGGAGGATTAGGGCGAGGAGTGCGTTTGCAAGGTTTAGTT TAACAGTGTATCGCGAGTATAGTGTTGATGAGGAGGGGTATTAGATGAGA ACTGTCGCCCGGGTCTTTACGGCCCCTGTGGAAAGCGAAAAGGAGACGCT TCTGGCGCTGCTTCCGCAATACGGGCTCAAACTAGCCCCGGACGGGATCC ATATCCAGTGGGCTCTGGGCAATTGCCGACATCCGCGAAACTGGAGCTTG CAACGTAAGGTCTATGATACCACTCTTATTATTTTCCTGGAATTTTTCAC GACTGCCATTAGCACTGCCGGCTCAACTGCGGCCAACAATGCCGTCCACG ACTTCAAGATCTCCAAAACCCTGTCAATCTTCCTTTTCGTCTCCATATAT CTTATCGGCCAAGCCATCGGGGGTGTCGTGTTCCCCCCATACTCTGAAGT ATTTGGCCGGAAGAAGCTCTATGTGGCAAGCTCAGCCCTATACGGCATGT CATGCATCCTGATTGCATCCGTACCATCATTGATAGGAGTAGCGATGGGC CGATGTCTCTGCGGGTTTCTGTCCGCCATCCCCACGACTGTTGTAGTGGG CAGCATTGAAGACACCTTCAATTCCCGCGAGCGAGTCTGGGTAATCTGCC TTTGGACCATGTTCGCCAATCTGGGCCTCGTCGTGGGTCCTATCCTCAGT ACCTTTGTCGTGGCCTACACCCACTGGAGATGGCTTTTTTACATCGCAGC CATCGTAACCGGAGTCCTCACCCTCCTACTCCTCACTATACACGAATCTC GTCCCTCCCTCCTCCTTGCCCGCGAAGTCGCCACTCTTCGAAAGGTCACC AAAATCGACACCTTGGAAGGTCTCAACCCGGATAAAGCCCCGGACATGCG CAGCTTCGTCCGCATCGCGCTCTTCCGCCCCATCCGCCTCCTCTTCACCG AGCTCATTGTCTCCGTCGTCTCCATCATCAGCGCCGTCGCCATCGCCCTA GTCTACCTTTTCACCGAAGCCCTTCCCCCGATCTACGAATCCTTCGGCTT CACCCGAAAACAAGCCTGCCTTCCCTTCATGGCCATCGGACTAGGTCTCT CCCTCGGTCTCCTCACCCGCTGTCTCGACCTCCGCATCATCACCCACCAC CGAGCCCAAGGCCGACCACTGCTCCCCGAAGACAAATTGACCGGGTTCTG GATCGGCGCACCCATACTCGCTGTAGCGTTATGGCTTTTTGCCTGGACCA TTCCTCCCGCTGTCACGAATCTCCCTTGGCTTGTGTCGGTCGCAGCTCTC GTGCTGGCTGGGTATAGTCTCAATGAGATGGACTACGTGCTGGGCGGGTA TCTGACGGATAGTTATCTCAGCTATGCGGCGAGTGGTCTGGCGGCATTGA GTCTGGTGAGGGCATTGTTGTCTGCTGCGTTGCCACTTATCTCGGCGCCT ATGTTGGAGCGACTCGGGGCTAATTATAGTGTTTCGGTGTTGGCCGCCGT AGCGACGGTATTTTGTGCTGTGCCGCCGTTATTTTCGAGGTACGGGAGGA GGATTAGGGCGAGGAGTGCGTTTGCAAGGTTTAGTTTAACAGTGTATCGC GAGTATAGTGTTGATGAGGAGGGGTATTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
Term | Definition |
GO:0055085 | transmembrane transport |
Vocabulary: Molecular Function
Term | Definition |
GO:0022857 | transmembrane transporter activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Properties
Property Name | Value |
DBxref | InterPro:IPR036259 |
DBxref | InterPro:IPR020846 |
DBxref | InterPro:IPR011701 |
DBxref | PFAM:PF07690 |
Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
ch1 | supercontig | ch1:1027490..1029222 + |
|