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KJC3_000499-T2, KJC3_000499-T2 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_000499-T2
Unique NameKJC3_000499-T2
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:1035052..1037247-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_000499-T2 ID=KJC3_000499-T2|Name=KJC3_000499-T2|organism=Aspergillus niger KJC3|type=mRNA|length=2196bp|location=Sequence derived from alignment at ch1:1035052..1037247- (Aspergillus niger KJC3)
CCTCCTTCTAAATGGAATTCCTCGGATCAAATATCCAGTAGAAAACCATC
AGACTATGCCCGCTGAGCCTAAGGTAACGAAGGAGAATGGTAGCAGCTCG
GGCAGACCCTATCGGTCCCATGCGCATCCCGCATGTCTACCTTGTCGGAA
ACGCAAGTCGCGATGCCGCACGAGAGATTCCTCCGCTACGTGTATGATGT
GTTTGGCTCATGCAACCGACTGCATTTTCCCTCCTGCTGATACCCTCGTC
CAAAGGAAGCGAACTGTCAATTTGCGGCGAATTGTACCCAAGACAGCTCG
AACAGAGCGGCCCTCCACCCCTCGGGTCGTACTCCCATCACCCAGGACCA
ACAAAGCTTCCGACACACCACAACTTACGGGACACCACCAGCCAGCTCAG
CCTTCCACAGCATATTCAGACGGCAAAGTTGCAAGTCTGATGGACGTGGT
CGGCGATACCGGGGACGACAGCTCTCATGTCGTCAGCCCAGTCGTTGCTG
ACGACAGTAGTATACTAGAAGAATATCTGTTCACCGTTCCAGATAATCGA
AGGCTTTGCTTGATGCACACCAATTCAAAACCCAGTCGACTTATGCGGCA
GGTACTGTTCAATACCATTCCGAGGCGTCCATTGGGGGTGTACTCCGGTC
AATCTCTCCCATCTATGAAGTGCGAGCTCATCGAAAAGTACCTCGAGCCT
ACGGCAAAGGATGTTGTGAGCCTGCAAGTCAATGCACGCTATTGTAGGGG
GTATTCGGTTACTGACTGGTTACATATAGGTTCTTTCAATATGCCAATAT
ATGCTTCCCTGTATTTGACGAGGCGTCGTTTATGAATGCCTACTGCACCC
GCAAAGAGGAAATATCTCCAGCTCTCCTCTGCAATCTATATGCCAACTCC
CTTATCTACTGGGACAATTCACCCAAGTTATGCTTAACTCGCACACCCGA
CATTCGCTATATCTGGAATCAAGCTAACGAGGCCCTTCATTCCGAACTTT
TCTTGTGCCCTGGTATATCAACTGTACTGGCGATGCTGCTAAACGTCTGC
GGTAGACCAAGCACCTCGATCTTTGGTAATGGGGGTATGGTAGGGACGGC
GGTAGCCTTATCCAACGCCTTGGGCTTGAATCGAGATCCCTGCCACTGGA
ACATCTCTACTCTTGAGAAGGGACTTCGCATCCGCATTTGGTGGTTGGTG
GTGATTCAAGATCGATGGTAGGATATTCCGCTTCTCGAGTTCTTCGCTTC
CACACTAACATTAACCAGGTGCAGCCTCGCCTACGGAACACCGCTTCAGG
TTCATCGAGCCCAATACGACGTTCCGTTTCCGACCATGGAGTATCTTTGT
TCTTCTTCCGCAATGCTATCCCAAGAAGCCGCAGCTTCAATCTTCATCGC
CTTCACAACGTTAACAGAAGTGTTGGGTCAATACCTTGAATACATCTATC
ACGTTTCCAGCCCCGTCAGAAAGACGATCACTTCGCTCTCACACCTGCTC
ACTAACTGGGAAGACTCCCTCGACATCAACACCCGCCACATAATCCTCCG
CGGAACCGACCTAAGCACCCCCGGCGTGGCAAACTTGCGCCTAGCATACT
TATCCGTGAAGCTCCTGCTCCGACGCATCGCACTCGACATGGATGACGAG
CATACTGAGACTTCCAACTTCGACAATGGGAATGATTCTAACTGTTCCTC
CTTCTCATTTACACAAGTCGAGCGCGCAGCAGAAGAGATAGTGCATCTCG
TAGGGGAGCTGGACGAGCAGCAGCTACGTGGATTTTGGGTCCCAGTTCAG
GCGTATTCGCTCACGTCTGCGACGACATTCCTTCTACGGAGTGGGCTGCG
CAGGGTTCAATTGCATTCCGCGAATAGTGACAGCAATCCACCACTAGATT
TGGCTAAAGAGATGGTTGCTACACTGCAGTCTCATCGGCAGCAGTTTCGA
TGGGATCTGGGGGATGATTGTTTGGCAAAGTGTGCTGAGCTGGTAGAGAG
GGTTGCTTCTCTAGAGAATGATGGGATGAGCTTGTCGTTGAATGAGGAAT
TGTCTGATCCATCTCATATTCTCGATATAGACACATCGATTCTGGATGAG
GTGTTTTGGGATATGCCGTGTATGGGGAATACCCTTAATTTATAACAACA
GTTGCGCTCATTAATGAATCATTTTCAGCATTATATCTTTATAACT
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Coding sequence (CDS) from alignment at ch1:1035052..1037247-

>KJC3_000499-T2 ID=KJC3_000499-T2|Name=KJC3_000499-T2|organism=Aspergillus niger KJC3|type=CDS|length=5949bp|location=Sequence derived from alignment at ch1:1035052..1037247- (Aspergillus niger KJC3)
GTGCAGCCTCGCCTACGGAACACCGCTTCAGGTTCATCGAGCCCAATACG
ACGTTCCGTTTCCGACCATGGAGTATCTTTGTTCTTCTTCCGCAATGCTA
TCCCAAGAAGCCGCAGCTTCAATCTTCATCGCCTTCACAACGTTAACAGA
AGTGTTGGGTCAATACCTTGAATACATCTATCACGTTTCCAGCCCCGTCA
GAAAGACGATCACTTCGCTCTCACACCTGCTCACTAACTGGGAAGACTCC
CTCGACATCAACACCCGCCACATAATCCTCCGCGGAACCGACCTAAGCAC
CCCCGGCGTGGCAAACTTGCGCCTAGCATACTTATCCGTGAAGCTCCTGC
TCCGACGCATCGCACTCGACATGGATGACGAGCATACTGAGACTTCCAAC
TTCGACAATGGGAATGATTCTAACTGTTCCTCCTTCTCATTTACACAAGT
CGAGCGCGCAGCAGAAGAGATAGTGCATCTCGTAGGGGAGCTGGACGAGC
AGCAGCTACGTGGATTTTGGGTCCCAGTTCAGGCGTATTCGCTCACGTCT
GCGACGACATTCCTTCTACGGAGTGGGCTGCGCAGGGTTCAATTGCATTC
CGCGAATAGTGACAGCAATCCACCACTAGATTTGGCTAAAGAGATGGTTG
CTACACTGCAGTCTCATCGGCAGCAGTTTCGATGGGATCTGGGGGATGAT
TGTTTGGCAAAGTGTGCTGAGCTGGTAGAGAGGGTTGCTTCTCTAGAGAA
TGATGGGATGAGCTTGTCGTTGAATGAGGAATTGTCTGATCCATCTCATA
TTCTCGATATAGACACATCGATTCTGGATGAGGTGTTTTGGGATATGCCG
TGTATGGGGAATACCCTTAATTTATAAGTTCTTTCAATATGCCAATATAT
GCTTCCCTGTATTTGACGAGGCGTCGTTTATGAATGCCTACTGCACCCGC
AAAGAGGAAATATCTCCAGCTCTCCTCTGCAATCTATATGCCAACTCCCT
TATCTACTGGGACAATTCACCCAAGTTATGCTTAACTCGCACACCCGACA
TTCGCTATATCTGGAATCAAGCTAACGAGGCCCTTCATTCCGAACTTTTC
TTGTGCCCTGGTATATCAACTGTACTGGCGATGCTGCTAAACGTCTGCGG
TAGACCAAGCACCTCGATCTTTGGTAATGGGGGTATGGTAGGGACGGCGG
TAGCCTTATCCAACGCCTTGGGCTTGAATCGAGATCCCTGCCACTGGAAC
ATCTCTACTCTTGAGAAGGGACTTCGCATCCGCATTTGGTGGTTGGTGGT
GATTCAAGATCGATGATGCCCGCTGAGCCTAAGGTAACGAAGGAGAATGG
TAGCAGCTCGGGCAGACCCTATCGGTCCCATGCGCATCCCGCATGTCTAC
CTTGTCGGAAACGCAAGTCGCGATGCCGCACGAGAGATTCCTCCGCTACG
TGTATGATGTGTTTGGCTCATGCAACCGACTGCATTTTCCCTCCTGCTGA
TACCCTCGTCCAAAGGAAGCGAACTGTCAATTTGCGGCGAATTGTACCCA
AGACAGCTCGAACAGAGCGGCCCTCCACCCCTCGGGTCGTACTCCCATCA
CCCAGGACCAACAAAGCTTCCGACACACCACAACTTACGGGACACCACCA
GCCAGCTCAGCCTTCCACAGCATATTCAGACGGCAAAGTTGCAAGTCTGA
TGGACGTGGTCGGCGATACCGGGGACGACAGCTCTCATGTCGTCAGCCCA
GTCGTTGCTGACGACAGTAGTATACTAGAAGAATATCTGTTCACCGTTCC
AGATAATCGAAGGCTTTGCTTGATGCACACCAATTCAAAACCCAGTCGAC
TTATGCGGCAGGTACTGTTCAATACCATTCCGAGGCGTCCATTGGGGGTG
TACTCCGGTCAATCTCTCCCATCTATGAAGTGCGAGCTCATCGAAAAGTA
CCTCGAGCCTACGGCAAAGGATGTTGTGAGCCTGTGCAGCCTCGCCTACG
GAACACCGCTTCAGGTTCATCGAGCCCAATACGACGTTCCGTTTCCGACC
ATGGAGTATCTTTGTTCTTCTTCCGCAATGCTATCCCAAGAAGCCGCAGC
TTCAATCTTCATCGCCTTCACAACGTTAACAGAAGTGTTGGGTCAATACC
TTGAATACATCTATCACGTTTCCAGCCCCGTCAGAAAGACGATCACTTCG
CTCTCACACCTGCTCACTAACTGGGAAGACTCCCTCGACATCAACACCCG
CCACATAATCCTCCGCGGAACCGACCTAAGCACCCCCGGCGTGGCAAACT
TGCGCCTAGCATACTTATCCGTGAAGCTCCTGCTCCGACGCATCGCACTC
GACATGGATGACGAGCATACTGAGACTTCCAACTTCGACAATGGGAATGA
TTCTAACTGTTCCTCCTTCTCATTTACACAAGTCGAGCGCGCAGCAGAAG
AGATAGTGCATCTCGTAGGGGAGCTGGACGAGCAGCAGCTACGTGGATTT
TGGGTCCCAGTTCAGGCGTATTCGCTCACGTCTGCGACGACATTCCTTCT
ACGGAGTGGGCTGCGCAGGGTTCAATTGCATTCCGCGAATAGTGACAGCA
ATCCACCACTAGATTTGGCTAAAGAGATGGTTGCTACACTGCAGTCTCAT
CGGCAGCAGTTTCGATGGGATCTGGGGGATGATTGTTTGGCAAAGTGTGC
TGAGCTGGTAGAGAGGGTTGCTTCTCTAGAGAATGATGGGATGAGCTTGT
CGTTGAATGAGGAATTGTCTGATCCATCTCATATTCTCGATATAGACACA
TCGATTCTGGATGAGGTGTTTTGGGATATGCCGTGTATGGGGAATACCCT
TAATTTATAAGTTCTTTCAATATGCCAATATATGCTTCCCTGTATTTGAC
GAGGCGTCGTTTATGAATGCCTACTGCACCCGCAAAGAGGAAATATCTCC
AGCTCTCCTCTGCAATCTATATGCCAACTCCCTTATCTACTGGGACAATT
CACCCAAGTTATGCTTAACTCGCACACCCGACATTCGCTATATCTGGAAT
CAAGCTAACGAGGCCCTTCATTCCGAACTTTTCTTGTGCCCTGGTATATC
AACTGTACTGGCGATGCTGCTAAACGTCTGCGGTAGACCAAGCACCTCGA
TCTTTGGTAATGGGGGTATGGTAGGGACGGCGGTAGCCTTATCCAACGCC
TTGGGCTTGAATCGAGATCCCTGCCACTGGAACATCTCTACTCTTGAGAA
GGGACTTCGCATCCGCATTTGGTGGTTGGTGGTGATTCAAGATCGATGAT
GCCCGCTGAGCCTAAGGTAACGAAGGAGAATGGTAGCAGCTCGGGCAGAC
CCTATCGGTCCCATGCGCATCCCGCATGTCTACCTTGTCGGAAACGCAAG
TCGCGATGCCGCACGAGAGATTCCTCCGCTACGTGTATGATGTGTTTGGC
TCATGCAACCGACTGCATTTTCCCTCCTGCTGATACCCTCGTCCAAAGGA
AGCGAACTGTCAATTTGCGGCGAATTGTACCCAAGACAGCTCGAACAGAG
CGGCCCTCCACCCCTCGGGTCGTACTCCCATCACCCAGGACCAACAAAGC
TTCCGACACACCACAACTTACGGGACACCACCAGCCAGCTCAGCCTTCCA
CAGCATATTCAGACGGCAAAGTTGCAAGTCTGATGGACGTGGTCGGCGAT
ACCGGGGACGACAGCTCTCATGTCGTCAGCCCAGTCGTTGCTGACGACAG
TAGTATACTAGAAGAATATCTGTTCACCGTTCCAGATAATCGAAGGCTTT
GCTTGATGCACACCAATTCAAAACCCAGTCGACTTATGCGGCAGGTACTG
TTCAATACCATTCCGAGGCGTCCATTGGGGGTGTACTCCGGTCAATCTCT
CCCATCTATGAAGTGCGAGCTCATCGAAAAGTACCTCGAGCCTACGGCAA
AGGATGTTGTGAGCCTGTGCAGCCTCGCCTACGGAACACCGCTTCAGGTT
CATCGAGCCCAATACGACGTTCCGTTTCCGACCATGGAGTATCTTTGTTC
TTCTTCCGCAATGCTATCCCAAGAAGCCGCAGCTTCAATCTTCATCGCCT
TCACAACGTTAACAGAAGTGTTGGGTCAATACCTTGAATACATCTATCAC
GTTTCCAGCCCCGTCAGAAAGACGATCACTTCGCTCTCACACCTGCTCAC
TAACTGGGAAGACTCCCTCGACATCAACACCCGCCACATAATCCTCCGCG
GAACCGACCTAAGCACCCCCGGCGTGGCAAACTTGCGCCTAGCATACTTA
TCCGTGAAGCTCCTGCTCCGACGCATCGCACTCGACATGGATGACGAGCA
TACTGAGACTTCCAACTTCGACAATGGGAATGATTCTAACTGTTCCTCCT
TCTCATTTACACAAGTCGAGCGCGCAGCAGAAGAGATAGTGCATCTCGTA
GGGGAGCTGGACGAGCAGCAGCTACGTGGATTTTGGGTCCCAGTTCAGGC
GTATTCGCTCACGTCTGCGACGACATTCCTTCTACGGAGTGGGCTGCGCA
GGGTTCAATTGCATTCCGCGAATAGTGACAGCAATCCACCACTAGATTTG
GCTAAAGAGATGGTTGCTACACTGCAGTCTCATCGGCAGCAGTTTCGATG
GGATCTGGGGGATGATTGTTTGGCAAAGTGTGCTGAGCTGGTAGAGAGGG
TTGCTTCTCTAGAGAATGATGGGATGAGCTTGTCGTTGAATGAGGAATTG
TCTGATCCATCTCATATTCTCGATATAGACACATCGATTCTGGATGAGGT
GTTTTGGGATATGCCGTGTATGGGGAATACCCTTAATTTATAAGTTCTTT
CAATATGCCAATATATGCTTCCCTGTATTTGACGAGGCGTCGTTTATGAA
TGCCTACTGCACCCGCAAAGAGGAAATATCTCCAGCTCTCCTCTGCAATC
TATATGCCAACTCCCTTATCTACTGGGACAATTCACCCAAGTTATGCTTA
ACTCGCACACCCGACATTCGCTATATCTGGAATCAAGCTAACGAGGCCCT
TCATTCCGAACTTTTCTTGTGCCCTGGTATATCAACTGTACTGGCGATGC
TGCTAAACGTCTGCGGTAGACCAAGCACCTCGATCTTTGGTAATGGGGGT
ATGGTAGGGACGGCGGTAGCCTTATCCAACGCCTTGGGCTTGAATCGAGA
TCCCTGCCACTGGAACATCTCTACTCTTGAGAAGGGACTTCGCATCCGCA
TTTGGTGGTTGGTGGTGATTCAAGATCGATGATGCCCGCTGAGCCTAAGG
TAACGAAGGAGAATGGTAGCAGCTCGGGCAGACCCTATCGGTCCCATGCG
CATCCCGCATGTCTACCTTGTCGGAAACGCAAGTCGCGATGCCGCACGAG
AGATTCCTCCGCTACGTGTATGATGTGTTTGGCTCATGCAACCGACTGCA
TTTTCCCTCCTGCTGATACCCTCGTCCAAAGGAAGCGAACTGTCAATTTG
CGGCGAATTGTACCCAAGACAGCTCGAACAGAGCGGCCCTCCACCCCTCG
GGTCGTACTCCCATCACCCAGGACCAACAAAGCTTCCGACACACCACAAC
TTACGGGACACCACCAGCCAGCTCAGCCTTCCACAGCATATTCAGACGGC
AAAGTTGCAAGTCTGATGGACGTGGTCGGCGATACCGGGGACGACAGCTC
TCATGTCGTCAGCCCAGTCGTTGCTGACGACAGTAGTATACTAGAAGAAT
ATCTGTTCACCGTTCCAGATAATCGAAGGCTTTGCTTGATGCACACCAAT
TCAAAACCCAGTCGACTTATGCGGCAGGTACTGTTCAATACCATTCCGAG
GCGTCCATTGGGGGTGTACTCCGGTCAATCTCTCCCATCTATGAAGTGCG
AGCTCATCGAAAAGTACCTCGAGCCTACGGCAAAGGATGTTGTGAGCCT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0042025host cell nucleus
GO:0005634nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0008270zinc ion binding
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO:0006351transcription, DNA-templated
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_000499KJC3_000499Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000499-T2KJC3_000499-T2-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000499-T2.cdsKJC3_000499-T2.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000499-T2.utr3p1KJC3_000499-T2.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000499-T2.exon3KJC3_000499-T2.exon3Aspergillus niger KJC3exon
KJC3_000499-T2.exon2KJC3_000499-T2.exon2Aspergillus niger KJC3exon
KJC3_000499-T2.exon1KJC3_000499-T2.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000499-T2.utr5p1KJC3_000499-T2.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR001138
DBxrefInterPro:IPR007219
DBxrefPFAM:PF04082
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:1035052..1037247 -
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