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KJC3_000499-T3, KJC3_000499-T3 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_000499-T3
Unique NameKJC3_000499-T3
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:1035052..1037247-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_000499-T3 ID=KJC3_000499-T3|Name=KJC3_000499-T3|organism=Aspergillus niger KJC3|type=mRNA|length=2196bp|location=Sequence derived from alignment at ch1:1035052..1037247- (Aspergillus niger KJC3)
CCTCCTTCTAAATGGAATTCCTCGGATCAAATATCCAGTAGAAAACCATC
AGACTATGCCCGCTGAGCCTAAGGTAACGAAGGAGAATGGTAGCAGCTCG
GGCAGACCCTATCGGTCCCATGCGCATCCCGCATGTCTACCTTGTCGGAA
ACGCAAGTCGCGATGCCGCACGAGAGATTCCTCCGCTACGTGTATGATGT
GTTTGGCTCATGCAACCGACTGCATTTTCCCTCCTGCTGATACCCTCGTC
CAAAGGAAGCGAACTGTCAATTTGCGGCGAATTGTACCCAAGACAGCTCG
AACAGAGCGGCCCTCCACCCCTCGGGTCGTACTCCCATCACCCAGGACCA
ACAAAGCTTCCGACACACCACAACTTACGGGACACCACCAGCCAGCTCAG
CCTTCCACAGCATATTCAGACGGCAAAGTTGCAAGTCTGATGGACGTGGT
CGGCGATACCGGGGACGACAGCTCTCATGTCGTCAGCCCAGTCGTTGCTG
ACGACAGTAGTATACTAGAAGAATATCTGTTCACCGTTCCAGATAATCGA
AGGCTTTGCTTGATGCACACCAATTCAAAACCCAGTCGACTTATGCGGCA
GGTACTGTTCAATACCATTCCGAGGCGTCCATTGGGGGTGTACTCCGGTC
AATCTCTCCCATCTATGAAGTGCGAGCTCATCGAAAAGTACCTCGAGCCT
ACGGCAAAGGATGTTGTGAGCCTGCAAGTCAATGCACGCTATTGTAGGGG
GTATTCGGTTACTGACTGGTTACATATAGGTTCTTTCAATATGCCAATAT
ATGCTTCCCTGTATTTGACGAGGCGTCGTTTATGAATGCCTACTGCACCC
GCAAAGAGGAAATATCTCCAGCTCTCCTCTGCAATCTATATGCCAACTCC
CTTATCTACTGGGACAATTCACCCAAGTTATGCTTAACTCGCACACCCGA
CATTCGCTATATCTGGAATCAAGCTAACGAGGCCCTTCATTCCGAACTTT
TCTTGTGCCCTGGTATATCAACTGTACTGGCGATGCTGCTAAACGTCTGC
GGTAGACCAAGCACCTCGATCTTTGGTAATGGGGGTATGGTAGGGACGGC
GGTAGCCTTATCCAACGCCTTGGGCTTGAATCGAGATCCCTGCCACTGGA
ACATCTCTACTCTTGAGAAGGGACTTCGCATCCGCATTTGGTGGTTGGTG
GTGATTCAAGATCGATGGTAGGATATTCCGCTTCTCGAGTTCTTCGCTTC
CACACTAACATTAACCAGGTGCAGCCTCGCCTACGGAACACCGCTTCAGG
TTCATCGAGCCCAATACGACGTTCCGTTTCCGACCATGGAGTATCTTTGT
TCTTCTTCCGCAATGCTATCCCAAGAAGCCGCAGCTTCAATCTTCATCGC
CTTCACAACGTTAACAGAAGTGTTGGGTCAATACCTTGAATACATCTATC
ACGTTTCCAGCCCCGTCAGAAAGACGATCACTTCGCTCTCACACCTGCTC
ACTAACTGGGAAGACTCCCTCGACATCAACACCCGCCACATAATCCTCCG
CGGAACCGACCTAAGCACCCCCGGCGTGGCAAACTTGCGCCTAGCATACT
TATCCGTGAAGCTCCTGCTCCGACGCATCGCACTCGACATGGATGACGAG
CATACTGAGACTTCCAACTTCGACAATGGGAATGATTCTAACTGTTCCTC
CTTCTCATTTACACAAGTCGAGCGCGCAGCAGAAGAGATAGTGCATCTCG
TAGGGGAGCTGGACGAGCAGCAGCTACGTGGATTTTGGGTCCCAGTTCAG
GCGTATTCGCTCACGTCTGCGACGACATTCCTTCTACGGAGTGGGCTGCG
CAGGGTTCAATTGCATTCCGCGAATAGTGACAGCAATCCACCACTAGATT
TGGCTAAAGAGATGGTTGCTACACTGCAGTCTCATCGGCAGCAGTTTCGA
TGGGATCTGGGGGATGATTGTTTGGCAAAGTGTGCTGAGCTGGTAGAGAG
GGTTGCTTCTCTAGAGAATGATGGGATGAGCTTGTCGTTGAATGAGGAAT
TGTCTGATCCATCTCATATTCTCGATATAGACACATCGATTCTGGATGAG
GTGTTTTGGGATATGCCGTGTATGGGGAATACCCTTAATTTATAACAACA
GTTGCGCTCATTAATGAATCATTTTCAGCATTATATCTTTATAACT
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Coding sequence (CDS) from alignment at ch1:1035052..1037247-

>KJC3_000499-T3 ID=KJC3_000499-T3|Name=KJC3_000499-T3|organism=Aspergillus niger KJC3|type=CDS|length=3960bp|location=Sequence derived from alignment at ch1:1035052..1037247- (Aspergillus niger KJC3)
GTGCAGCCTCGCCTACGGAACACCGCTTCAGGTTCATCGAGCCCAATACG
ACGTTCCGTTTCCGACCATGGAGTATCTTTGTTCTTCTTCCGCAATGCTA
TCCCAAGAAGCCGCAGCTTCAATCTTCATCGCCTTCACAACGTTAACAGA
AGTGTTGGGTCAATACCTTGAATACATCTATCACGTTTCCAGCCCCGTCA
GAAAGACGATCACTTCGCTCTCACACCTGCTCACTAACTGGGAAGACTCC
CTCGACATCAACACCCGCCACATAATCCTCCGCGGAACCGACCTAAGCAC
CCCCGGCGTGGCAAACTTGCGCCTAGCATACTTATCCGTGAAGCTCCTGC
TCCGACGCATCGCACTCGACATGGATGACGAGCATACTGAGACTTCCAAC
TTCGACAATGGGAATGATTCTAACTGTTCCTCCTTCTCATTTACACAAGT
CGAGCGCGCAGCAGAAGAGATAGTGCATCTCGTAGGGGAGCTGGACGAGC
AGCAGCTACGTGGATTTTGGGTCCCAGTTCAGGCGTATTCGCTCACGTCT
GCGACGACATTCCTTCTACGGAGTGGGCTGCGCAGGGTTCAATTGCATTC
CGCGAATAGTGACAGCAATCCACCACTAGATTTGGCTAAAGAGATGGTTG
CTACACTGCAGTCTCATCGGCAGCAGTTTCGATGGGATCTGGGGGATGAT
TGTTTGGCAAAGTGTGCTGAGCTGGTAGAGAGGGTTGCTTCTCTAGAGAA
TGATGGGATGAGCTTGTCGTTGAATGAGGAATTGTCTGATCCATCTCATA
TTCTCGATATAGACACATCGATTCTGGATGAGGTGTTTTGGGATATGCCG
TGTATGGGGAATACCCTTAATTTATAAGTTCTTTCAATATGCCAATATAT
GCTTCCCTGTATTTGACGAGGCGTCGTTTATGAATGCCTACTGCACCCGC
AAAGAGGAAATATCTCCAGCTCTCCTCTGCAATCTATATGCCAACTCCCT
TATCTACTGGGACAATTCACCCAAGTTATGCTTAACTCGCACACCCGACA
TTCGCTATATCTGGAATCAAGCTAACGAGGCCCTTCATTCCGAACTTTTC
TTGTGCCCTGGTATATCAACTGTACTGGCGATGCTGCTAAACGTCTGCGG
TAGACCAAGCACCTCGATCTTTGGTAATGGGGGTATGGTAGGGACGGCGG
TAGCCTTATCCAACGCCTTGGGCTTGAATCGAGATCCCTGCCACTGGAAC
ATCTCTACTCTTGAGAAGGGACTTCGCATCCGCATTTGGTGGTTGGTGGT
GATTCAAGATCGATGATGTTGTGCAGCCTCGCCTACGGAACACCGCTTCA
GGTTCATCGAGCCCAATACGACGTTCCGTTTCCGACCATGGAGTATCTTT
GTTCTTCTTCCGCAATGCTATCCCAAGAAGCCGCAGCTTCAATCTTCATC
GCCTTCACAACGTTAACAGAAGTGTTGGGTCAATACCTTGAATACATCTA
TCACGTTTCCAGCCCCGTCAGAAAGACGATCACTTCGCTCTCACACCTGC
TCACTAACTGGGAAGACTCCCTCGACATCAACACCCGCCACATAATCCTC
CGCGGAACCGACCTAAGCACCCCCGGCGTGGCAAACTTGCGCCTAGCATA
CTTATCCGTGAAGCTCCTGCTCCGACGCATCGCACTCGACATGGATGACG
AGCATACTGAGACTTCCAACTTCGACAATGGGAATGATTCTAACTGTTCC
TCCTTCTCATTTACACAAGTCGAGCGCGCAGCAGAAGAGATAGTGCATCT
CGTAGGGGAGCTGGACGAGCAGCAGCTACGTGGATTTTGGGTCCCAGTTC
AGGCGTATTCGCTCACGTCTGCGACGACATTCCTTCTACGGAGTGGGCTG
CGCAGGGTTCAATTGCATTCCGCGAATAGTGACAGCAATCCACCACTAGA
TTTGGCTAAAGAGATGGTTGCTACACTGCAGTCTCATCGGCAGCAGTTTC
GATGGGATCTGGGGGATGATTGTTTGGCAAAGTGTGCTGAGCTGGTAGAG
AGGGTTGCTTCTCTAGAGAATGATGGGATGAGCTTGTCGTTGAATGAGGA
ATTGTCTGATCCATCTCATATTCTCGATATAGACACATCGATTCTGGATG
AGGTGTTTTGGGATATGCCGTGTATGGGGAATACCCTTAATTTATAAGTT
CTTTCAATATGCCAATATATGCTTCCCTGTATTTGACGAGGCGTCGTTTA
TGAATGCCTACTGCACCCGCAAAGAGGAAATATCTCCAGCTCTCCTCTGC
AATCTATATGCCAACTCCCTTATCTACTGGGACAATTCACCCAAGTTATG
CTTAACTCGCACACCCGACATTCGCTATATCTGGAATCAAGCTAACGAGG
CCCTTCATTCCGAACTTTTCTTGTGCCCTGGTATATCAACTGTACTGGCG
ATGCTGCTAAACGTCTGCGGTAGACCAAGCACCTCGATCTTTGGTAATGG
GGGTATGGTAGGGACGGCGGTAGCCTTATCCAACGCCTTGGGCTTGAATC
GAGATCCCTGCCACTGGAACATCTCTACTCTTGAGAAGGGACTTCGCATC
CGCATTTGGTGGTTGGTGGTGATTCAAGATCGATGATGTTGTGCAGCCTC
GCCTACGGAACACCGCTTCAGGTTCATCGAGCCCAATACGACGTTCCGTT
TCCGACCATGGAGTATCTTTGTTCTTCTTCCGCAATGCTATCCCAAGAAG
CCGCAGCTTCAATCTTCATCGCCTTCACAACGTTAACAGAAGTGTTGGGT
CAATACCTTGAATACATCTATCACGTTTCCAGCCCCGTCAGAAAGACGAT
CACTTCGCTCTCACACCTGCTCACTAACTGGGAAGACTCCCTCGACATCA
ACACCCGCCACATAATCCTCCGCGGAACCGACCTAAGCACCCCCGGCGTG
GCAAACTTGCGCCTAGCATACTTATCCGTGAAGCTCCTGCTCCGACGCAT
CGCACTCGACATGGATGACGAGCATACTGAGACTTCCAACTTCGACAATG
GGAATGATTCTAACTGTTCCTCCTTCTCATTTACACAAGTCGAGCGCGCA
GCAGAAGAGATAGTGCATCTCGTAGGGGAGCTGGACGAGCAGCAGCTACG
TGGATTTTGGGTCCCAGTTCAGGCGTATTCGCTCACGTCTGCGACGACAT
TCCTTCTACGGAGTGGGCTGCGCAGGGTTCAATTGCATTCCGCGAATAGT
GACAGCAATCCACCACTAGATTTGGCTAAAGAGATGGTTGCTACACTGCA
GTCTCATCGGCAGCAGTTTCGATGGGATCTGGGGGATGATTGTTTGGCAA
AGTGTGCTGAGCTGGTAGAGAGGGTTGCTTCTCTAGAGAATGATGGGATG
AGCTTGTCGTTGAATGAGGAATTGTCTGATCCATCTCATATTCTCGATAT
AGACACATCGATTCTGGATGAGGTGTTTTGGGATATGCCGTGTATGGGGA
ATACCCTTAATTTATAAGTTCTTTCAATATGCCAATATATGCTTCCCTGT
ATTTGACGAGGCGTCGTTTATGAATGCCTACTGCACCCGCAAAGAGGAAA
TATCTCCAGCTCTCCTCTGCAATCTATATGCCAACTCCCTTATCTACTGG
GACAATTCACCCAAGTTATGCTTAACTCGCACACCCGACATTCGCTATAT
CTGGAATCAAGCTAACGAGGCCCTTCATTCCGAACTTTTCTTGTGCCCTG
GTATATCAACTGTACTGGCGATGCTGCTAAACGTCTGCGGTAGACCAAGC
ACCTCGATCTTTGGTAATGGGGGTATGGTAGGGACGGCGGTAGCCTTATC
CAACGCCTTGGGCTTGAATCGAGATCCCTGCCACTGGAACATCTCTACTC
TTGAGAAGGGACTTCGCATCCGCATTTGGTGGTTGGTGGTGATTCAAGAT
CGATGATGTT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006351transcription, DNA-templated
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_000499KJC3_000499Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000499-T3KJC3_000499-T3-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000499-T3.cdsKJC3_000499-T3.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000499-T3.utr3p1KJC3_000499-T3.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000499-T3.exon4KJC3_000499-T3.exon4Aspergillus niger KJC3exon
KJC3_000499-T3.exon3KJC3_000499-T3.exon3Aspergillus niger KJC3exon
KJC3_000499-T3.exon2KJC3_000499-T3.exon2Aspergillus niger KJC3exon
KJC3_000499-T3.exon1KJC3_000499-T3.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000499-T3.utr5p2KJC3_000499-T3.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_000499-T3.utr5p1KJC3_000499-T3.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR007219
DBxrefPFAM:PF04082
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:1035052..1037247 -
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