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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:1041541..1043580- Legend: CDSpolypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000502-T1 ID=KJC3_000502-T1|Name=KJC3_000502-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2040bp|location=Sequence derived from alignment at ch1:1041541..1043580- (Aspergillus niger KJC3)
ATGCCGGAACCACTACCTCCTTTGGCACCGGTTCCACCCCCGGAGGTGCA
GAGCACCGTACCACCCAACGAATGGGAGCTCTATATAGATGCGTGGATCT
TGTTGCTGCAAGTACGCATAGAAGCCCCTGATTCCCAATTCAGGGAGATT
GCCGCCAATGATGAATCTGCCGTGACATTCTTGACCTCCTTCTATCATCA
ATCCGCCACATCTGGGTTATCTGGCTTCCATGCCGGGCTTAAAGCGCGAT
CATTACGGAAGCTCTGCTTCTTGTTGACTAGGAGGTTCCTCCTTGATGCC
TCTGCAACACCGTCTGAGCTGCTTGAAGTGGATGTTCTTGCGAACGTGTG
TTGCACCTATCCTTCGAGCGCTGCCTTGAAGCGACTTTTGTCCGATGCCT
GGAACAAGCATCAAGATACCATAACATCCAGCCTCGAGAAGACAAAGACC
AAGATTATCAAAGAGCTTTCGTTGCTGAATCCTACCAAGTCTATGACCGT
CCTCTCAGACATCCGCCTCTTGACTATTCTGGCGTCTGCACTGCCCGGTT
GCGGCCAGGTCCTCATGACGGGGTCTGACTTTCTGGACACATTCGCCGAT
GCATACCAAACACACAAACGAGCGGACATCCGTAGTGTCCTTGTAGCGAA
CGTCTACGTCGGTCTAGCATCGCTCCTCAAAGGCCCCAAGCTGAACCTCT
CCGCGCTGCTGGACCAGCTCTACAGTCTAAAGTCCGGCGTTGGCATCGGA
TCCTCAACAACGAAAAAGGAGCCCACCCTCCTGTCCGACGTCATCTGCAG
TACAGACCTTCTAGTCCGTCTCGACCGCCACCTCAGCACCCATCCCCAGA
AACGAGGCCAAGACCTCCTCACCAGTCTACGAACCTACCAAGAAGAGACA
AAGGTCTTTCACCGTCGCCATCAAAAACAAAAGAAGCGACTCCTCGACAA
AGGCAAGGGCCGTGCCGCCACGGACCTCCCCGCCCCCGAAGACATGCACA
TCCATCGCATGTCCCTCATCACCCAAGTCCAAGACCTCTTCCCCGACCTA
GGCTCCGGCTACATCACCCGCCTGCTAGACCACTACAATGACGACCCCGA
AACAATAGTCTCCCATCTCCTCGACGACTCCATCCCCTCTGAACTCCGCA
CCTTAGACAAATCCGAACAACTCCCTACATCAACATCAACATCAACCCTC
CCACACGACCCTCTCCCGCCCCGCTCAACGCCACCGCCCACAGAACCAGC
CCTTCCAACCCGCAAAAACATCTTCGACAACGACGTCGACCTCGCCGAAC
TATCCGACCAATCCACTCTCCACCACGGCCGCCGCACCAACACCACCCAA
GCCGACGACCTCCTCGCCGACCGCACCCACCACGCCGCCAAGAAAGCCGC
CATCCTCTCCGCCCTGGCAACCTTCGACTCTGATGACGACGAACGCGACG
ACACCTATGACATCGCCGACGTCGGCGGCACCATTGATGACACCACCACC
GACGATGCCAAGGCTGCAGCAGAACAACAACAAGAGGCAGAACTCTCCCT
CTACCGAGCATACAAGTCTAATCCGGCCCTGTTCGCGCGCGACTCTGCTA
CGCGACGCTCACAGCCTCGCGACTCACTTAAGCGCGAAACCGGCATGACG
GATGAAGCGATCGAGGGGTGGGCGGTCATGTTGTCTCGGGATCCGAAACG
GATGGCTAGATTGGAGGATAAGATGGCTTTCGGTGCTGATGGTGGTGGGT
TGAATCAGCCTGAGTTACCGGCTACGTCGTATCGGAGACCTGGTGCTGGA
GCTGAAGATGACGATGAGAGTGAGACAGGTGGGAGCAGCAGCTCAAGAGG
AAGAGGAGGACGCGGACGCGGTGGGAGAGGTCGGGGACGTGGTGCAGGAC
AGCAGGGTAGTACTCCTGGGAATAGTAACCCTGCTGTTGCGCGGCAGAGA
AAAGAGGAGAATAAAGCTAGTCGGGCGAATCATAATCGTCGACAGCAGCG
AGCGAGGAAGGTTGCGAGGGCTGGGGGCATGATGGGGTAG back to topCoding sequence (CDS) from alignment at ch1:1041541..1043580- >KJC3_000502-T1 ID=KJC3_000502-T1|Name=KJC3_000502-T1|organism=Aspergillus niger KJC3|type=CDS|length=2040bp|location=Sequence derived from alignment at ch1:1041541..1043580- (Aspergillus niger KJC3)
ATGCCGGAACCACTACCTCCTTTGGCACCGGTTCCACCCCCGGAGGTGCA
GAGCACCGTACCACCCAACGAATGGGAGCTCTATATAGATGCGTGGATCT
TGTTGCTGCAAGTACGCATAGAAGCCCCTGATTCCCAATTCAGGGAGATT
GCCGCCAATGATGAATCTGCCGTGACATTCTTGACCTCCTTCTATCATCA
ATCCGCCACATCTGGGTTATCTGGCTTCCATGCCGGGCTTAAAGCGCGAT
CATTACGGAAGCTCTGCTTCTTGTTGACTAGGAGGTTCCTCCTTGATGCC
TCTGCAACACCGTCTGAGCTGCTTGAAGTGGATGTTCTTGCGAACGTGTG
TTGCACCTATCCTTCGAGCGCTGCCTTGAAGCGACTTTTGTCCGATGCCT
GGAACAAGCATCAAGATACCATAACATCCAGCCTCGAGAAGACAAAGACC
AAGATTATCAAAGAGCTTTCGTTGCTGAATCCTACCAAGTCTATGACCGT
CCTCTCAGACATCCGCCTCTTGACTATTCTGGCGTCTGCACTGCCCGGTT
GCGGCCAGGTCCTCATGACGGGGTCTGACTTTCTGGACACATTCGCCGAT
GCATACCAAACACACAAACGAGCGGACATCCGTAGTGTCCTTGTAGCGAA
CGTCTACGTCGGTCTAGCATCGCTCCTCAAAGGCCCCAAGCTGAACCTCT
CCGCGCTGCTGGACCAGCTCTACAGTCTAAAGTCCGGCGTTGGCATCGGA
TCCTCAACAACGAAAAAGGAGCCCACCCTCCTGTCCGACGTCATCTGCAG
TACAGACCTTCTAGTCCGTCTCGACCGCCACCTCAGCACCCATCCCCAGA
AACGAGGCCAAGACCTCCTCACCAGTCTACGAACCTACCAAGAAGAGACA
AAGGTCTTTCACCGTCGCCATCAAAAACAAAAGAAGCGACTCCTCGACAA
AGGCAAGGGCCGTGCCGCCACGGACCTCCCCGCCCCCGAAGACATGCACA
TCCATCGCATGTCCCTCATCACCCAAGTCCAAGACCTCTTCCCCGACCTA
GGCTCCGGCTACATCACCCGCCTGCTAGACCACTACAATGACGACCCCGA
AACAATAGTCTCCCATCTCCTCGACGACTCCATCCCCTCTGAACTCCGCA
CCTTAGACAAATCCGAACAACTCCCTACATCAACATCAACATCAACCCTC
CCACACGACCCTCTCCCGCCCCGCTCAACGCCACCGCCCACAGAACCAGC
CCTTCCAACCCGCAAAAACATCTTCGACAACGACGTCGACCTCGCCGAAC
TATCCGACCAATCCACTCTCCACCACGGCCGCCGCACCAACACCACCCAA
GCCGACGACCTCCTCGCCGACCGCACCCACCACGCCGCCAAGAAAGCCGC
CATCCTCTCCGCCCTGGCAACCTTCGACTCTGATGACGACGAACGCGACG
ACACCTATGACATCGCCGACGTCGGCGGCACCATTGATGACACCACCACC
GACGATGCCAAGGCTGCAGCAGAACAACAACAAGAGGCAGAACTCTCCCT
CTACCGAGCATACAAGTCTAATCCGGCCCTGTTCGCGCGCGACTCTGCTA
CGCGACGCTCACAGCCTCGCGACTCACTTAAGCGCGAAACCGGCATGACG
GATGAAGCGATCGAGGGGTGGGCGGTCATGTTGTCTCGGGATCCGAAACG
GATGGCTAGATTGGAGGATAAGATGGCTTTCGGTGCTGATGGTGGTGGGT
TGAATCAGCCTGAGTTACCGGCTACGTCGTATCGGAGACCTGGTGCTGGA
GCTGAAGATGACGATGAGAGTGAGACAGGTGGGAGCAGCAGCTCAAGAGG
AAGAGGAGGACGCGGACGCGGTGGGAGAGGTCGGGGACGTGGTGCAGGAC
AGCAGGGTAGTACTCCTGGGAATAGTAACCCTGCTGTTGCGCGGCAGAGA
AAAGAGGAGAATAAAGCTAGTCGGGCGAATCATAATCGTCGACAGCAGCG
AGCGAGGAAGGTTGCGAGGGCTGGGGGCATGATGGGGTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR009060 |
| DBxref | InterPro:IPR041800 |
| DBxref | InterPro:IPR003892 |
| DBxref | PFAM:PF02845 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:1041541..1043580 - |
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