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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:1044621..1045751+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000503-T1 ID=KJC3_000503-T1|Name=KJC3_000503-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1131bp|location=Sequence derived from alignment at ch1:1044621..1045751+ (Aspergillus niger KJC3)
GAAACACGGAAGAGTACTTAGGCTTTCCCATGCCTCTGCGGGGATTCCAG
AATGAGGCCAAACAAATAGTGCCTAGAAATCTTGACTGGCTCAAGATTTC
ATTCTACGGCCACTGGTATCTTCGACCAGCACCATGCGCGCACTAGTGAT
TGGCGGGACTGGGCGTTGTGGCAGACTTGTCATTGATGAGCTGTTGAGGC
GAGGTAGGCTTCTACTATGTTATACTACCTCAGACACGTTGATGAATATG
GCTAACATACCCAAGGCCACCACCAGGTCACTACCTTAGCGCGAACACCA
GATGCGCTGGGAGATCCACGACCTAGCCTAAATGTCATCCAAGGTTAGTA
CACAATGAATTCTTGCTGCTGCTGCTGCTTGTTGTAATATGTTCCACGGC
TGACATGTCCCAGGCACTCCGATGAATCTAGATGACGTACGAGCTGCGTT
TAAAGCAGACAAACCAGACGTGGTGATTGTGACGCTGAATGCGCCTCGAG
CGAGCGATAGTCCATTTGCTGCTCCCATCTCTCCGCCTCGTCTAATGGCC
GACTGCAACGCCAATGTAGTGGCTGCGATGAAAGAGTTTGGGGTTCGCAA
GATCGTGATTCTCCAGGCGTTCGGGGTGGGAGCATCTTGGACTAATCTGC
ACATCCTGCTACGTCTACTCATGAAGACATCTAATATGTCACATCAGTAC
GATGATCACAACGAGACAGAGAGGGAAGTCCTGGCCAGCGGGGTCGATTA
TGTGTTTGTGCGGCCGTCCCGGCTGGTCGAAACCGATGAAACCGCCATCA
AGGTGTGGCCGGATGATGGCAAGGGAGTTCCTATGATGGCCAGTACAAGC
CGGATCAGCGTGGCACGATATTTGGTCGATGTGGCCGAGGGTGATGAATG
GGATAACACGGCTCCAGTTATCACCAACTGAATCAAATGGGGAATCGGGA
CGGGAGGTGGAGATGTTGCGGGGGTGGAGATTGGCGTTGTTTAATCATTT
GGTCTATTTTGGTTGTGGGATTTTTGGGTCAGGGTCAGGTCTGGTGGGTA
AGTACAATATTGATGATATGACAAAATCCCTGGCAGGTCTACGATATGCC
TGGATGTGTAATGATAATGAGGAAATTTGAA back to topCoding sequence (CDS) from alignment at ch1:1044621..1045751+ >KJC3_000503-T1 ID=KJC3_000503-T1|Name=KJC3_000503-T1|organism=Aspergillus niger KJC3|type=CDS|length=510bp|location=Sequence derived from alignment at ch1:1044621..1045751+ (Aspergillus niger KJC3)
ATGAATCTAGATGACGTACGAGCTGCGTTTAAAGCAGACAAACCAGACGT
GGTGATTGTGACGCTGAATGCGCCTCGAGCGAGCGATAGTCCATTTGCTG
CTCCCATCTCTCCGCCTCGTCTAATGGCCGACTGCAACGCCAATGTAGTG
GCTGCGATGAAAGAGTTTGGGGTTCGCAAGATCGTGATTCTCCAGGCGTT
CGGGGTGGGAGCATCTTGGACTAATCTGCACATCCTGCTACGTCTACTCA
TGAAGACATCTAATATGTCACATCAGTACGATGATCACAACGAGACAGAG
AGGGAAGTCCTGGCCAGCGGGGTCGATTATGTGTTTGTGCGGCCGTCCCG
GCTGGTCGAAACCGATGAAACCGCCATCAAGGTGTGGCCGGATGATGGCA
AGGGAGTTCCTATGATGGCCAGTACAAGCCGGATCAGCGTGGCACGATAT
TTGGTCGATGTGGCCGAGGGTGATGAATGGGATAACACGGCTCCAGTTAT
CACCAACTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000503-T1.utr3p1 | KJC3_000503-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR016040 |
| DBxref | PFAM:PF13460 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:1044621..1045751 + |
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