You are here

Home

KJC3_000506-T1, KJC3_000506-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_000506-T1
Unique NameKJC3_000506-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:1051672..1053186-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_000506-T1 ID=KJC3_000506-T1|Name=KJC3_000506-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1515bp|location=Sequence derived from alignment at ch1:1051672..1053186- (Aspergillus niger KJC3)
TGTTATTGCTGGATACTACTTATCTGTCCATATTAATCAAAAAAGTCTCC
CCCACGCCAAATGGTGGATCTATCTCCACCGGCCATTCATAAATGCCCTG
ATTAATCGGATATTCCCCGTCGTATATCCCTCACATCTTCTCTGCTCTTG
TTTTCTTCTTTTCTTTCTTCCCCTCTTCTCCCCGCAGGATACTCATTTCC
TTGACATCATCGCCATCATGCCCGCCGCATTGCTGATCGGTGCCATCACC
CATTCCATGCCCGAATGGAATGATCTCTCCTCCATCCTGACCTTGAAGGA
ATTCCCCTCCGGAACTCGCGAAGACTTTATTCGCAATTGCCGCGACGGTC
AGTACGATGATGTAGTCGCCATCTATCGCTCTAATACTTCTACCAAGGTA
AGCGGCACTCATACTTATCCAAGAACTAAGCTGAATCCCTGCCCCAGTTC
ACCGGCCCATTCGACGCAGAATTACTCTCCTTCCTGCCCTCCTCACTCAA
GTACATCGCCCACAATGGCGCAGGTTACGATAACATCGACGTCGCGGCCT
GCACGAAGAAAGGTACACCAAGCTCTCCTCCTAGCATGAAGCACACTAAC
CTTCCCAGGTATCGCCGTCTCTAGCACTCCCGTCGCAGTTAACAACGCCA
CCGCCGACGTGGCAATCTTCCTAATGATTGGCGCTTTGCGACAGGCATAC
ATTCCCGTCACATCTCTCCGCGAAGGTGAGCCCATCCACCTCAATCCAGT
CACAACTCAATATAACCATGAAACAGGAAAGTTCCTCGGCCAGACAGGCC
TCGGACACGATCCCCAGAACAAGGTGCTTGGAATTCTCGGCATGGGAGGA
ATCGGCCGTGTAAGTCCAGCACACTGAACCAAAGGAGCATCAAATTAATA
AGTTGTAGGAGGTGGCTCGTCGTGCGCGCGCCTTCGGAATGACCATCCAG
TACCACAACCGGTCGCGTCTCTCCCCGGAACTCGAGGACGGAGCGACCTA
CGTCTCGTTTGATGAGCTGCTCGCCAATTCTGATGTTTTGAGTCTGAATC
TGGCGCTGAATGCGTCTACTCGTCATATTATTGGCAAGACGGAGTTCCAG
AAGATGAAGGATGGTGTGATTATTGTCAATACGGCGCGGGGTGCCTTGAT
TGATGAGAAGGCCTTGGTTGAGGCGCTGGAGTCGGGCAAGGTTGGTTGAA
CTCTTCACTGTAGCTATGAACGATTGTGCTAACGTGATGATATAGGTATG
GTCTGCTGGGCTGGATGTCTATGAGAATGAACCCGCCATTGAGCCGGGAT
TGGTAAATAACCCCCGAGTCATGCTGTTGCCGCATATCGGTACGATGACT
TATGAGACGCAACGGGAGATGGAACTACTGGTGTTGAACAACCTGCGCTC
TGGCGTGGAGACGGGGAAGATGATTACTTTGGTGCCCGAGCAGAAGGATG
TGTTTGGAAAATAGATGTACTGTGACAGATACCAACCTTATCTAAGAATA
TCATATAGATCAGAG
back to top

Coding sequence (CDS) from alignment at ch1:1051672..1053186-

>KJC3_000506-T1 ID=KJC3_000506-T1|Name=KJC3_000506-T1|organism=Aspergillus niger KJC3|type=CDS|length=5976bp|location=Sequence derived from alignment at ch1:1051672..1053186- (Aspergillus niger KJC3)
GTATGGTCTGCTGGGCTGGATGTCTATGAGAATGAACCCGCCATTGAGCC
GGGATTGGTAAATAACCCCCGAGTCATGCTGTTGCCGCATATCGGTACGA
TGACTTATGAGACGCAACGGGAGATGGAACTACTGGTGTTGAACAACCTG
CGCTCTGGCGTGGAGACGGGGAAGATGATTACTTTGGTGCCCGAGCAGAA
GGATGTGTTTGGAAAATAGGAGGTGGCTCGTCGTGCGCGCGCCTTCGGAA
TGACCATCCAGTACCACAACCGGTCGCGTCTCTCCCCGGAACTCGAGGAC
GGAGCGACCTACGTCTCGTTTGATGAGCTGCTCGCCAATTCTGATGTTTT
GAGTCTGAATCTGGCGCTGAATGCGTCTACTCGTCATATTATTGGCAAGA
CGGAGTTCCAGAAGATGAAGGATGGTGTGATTATTGTCAATACGGCGCGG
GGTGCCTTGATTGATGAGAAGGCCTTGGTTGAGGCGCTGGAGTCGGGCAA
GGAAAGTTCCTCGGCCAGACAGGCCTCGGACACGATCCCCAGAACAAGGT
GCTTGGAATTCTCGGCATGGGAGGAATCGGCCGTGTATCGCCGTCTCTAG
CACTCCCGTCGCAGTTAACAACGCCACCGCCGACGTGGCAATCTTCCTAA
TGATTGGCGCTTTGCGACAGGCATACATTCCCGTCACATCTCTCCGCGAA
GTTCACCGGCCCATTCGACGCAGAATTACTCTCCTTCCTGCCCTCCTCAC
TCAAGTACATCGCCCACAATGGCGCAGGTTACGATAACATCGACGTCGCG
GCCTGCACGAAGAAAGATGCCCGCCGCATTGCTGATCGGTGCCATCACCC
ATTCCATGCCCGAATGGAATGATCTCTCCTCCATCCTGACCTTGAAGGAA
TTCCCCTCCGGAACTCGCGAAGACTTTATTCGCAATTGCCGCGACGGTCA
GTACGATGATGTAGTCGCCATCTATCGCTCTAATACTTCTACCAAGGTAT
GGTCTGCTGGGCTGGATGTCTATGAGAATGAACCCGCCATTGAGCCGGGA
TTGGTAAATAACCCCCGAGTCATGCTGTTGCCGCATATCGGTACGATGAC
TTATGAGACGCAACGGGAGATGGAACTACTGGTGTTGAACAACCTGCGCT
CTGGCGTGGAGACGGGGAAGATGATTACTTTGGTGCCCGAGCAGAAGGAT
GTGTTTGGAAAATAGGAGGTGGCTCGTCGTGCGCGCGCCTTCGGAATGAC
CATCCAGTACCACAACCGGTCGCGTCTCTCCCCGGAACTCGAGGACGGAG
CGACCTACGTCTCGTTTGATGAGCTGCTCGCCAATTCTGATGTTTTGAGT
CTGAATCTGGCGCTGAATGCGTCTACTCGTCATATTATTGGCAAGACGGA
GTTCCAGAAGATGAAGGATGGTGTGATTATTGTCAATACGGCGCGGGGTG
CCTTGATTGATGAGAAGGCCTTGGTTGAGGCGCTGGAGTCGGGCAAGGAA
AGTTCCTCGGCCAGACAGGCCTCGGACACGATCCCCAGAACAAGGTGCTT
GGAATTCTCGGCATGGGAGGAATCGGCCGTGTATCGCCGTCTCTAGCACT
CCCGTCGCAGTTAACAACGCCACCGCCGACGTGGCAATCTTCCTAATGAT
TGGCGCTTTGCGACAGGCATACATTCCCGTCACATCTCTCCGCGAAGTTC
ACCGGCCCATTCGACGCAGAATTACTCTCCTTCCTGCCCTCCTCACTCAA
GTACATCGCCCACAATGGCGCAGGTTACGATAACATCGACGTCGCGGCCT
GCACGAAGAAAGATGCCCGCCGCATTGCTGATCGGTGCCATCACCCATTC
CATGCCCGAATGGAATGATCTCTCCTCCATCCTGACCTTGAAGGAATTCC
CCTCCGGAACTCGCGAAGACTTTATTCGCAATTGCCGCGACGGTCAGTAC
GATGATGTAGTCGCCATCTATCGCTCTAATACTTCTACCAAGGTATGGTC
TGCTGGGCTGGATGTCTATGAGAATGAACCCGCCATTGAGCCGGGATTGG
TAAATAACCCCCGAGTCATGCTGTTGCCGCATATCGGTACGATGACTTAT
GAGACGCAACGGGAGATGGAACTACTGGTGTTGAACAACCTGCGCTCTGG
CGTGGAGACGGGGAAGATGATTACTTTGGTGCCCGAGCAGAAGGATGTGT
TTGGAAAATAGGAGGTGGCTCGTCGTGCGCGCGCCTTCGGAATGACCATC
CAGTACCACAACCGGTCGCGTCTCTCCCCGGAACTCGAGGACGGAGCGAC
CTACGTCTCGTTTGATGAGCTGCTCGCCAATTCTGATGTTTTGAGTCTGA
ATCTGGCGCTGAATGCGTCTACTCGTCATATTATTGGCAAGACGGAGTTC
CAGAAGATGAAGGATGGTGTGATTATTGTCAATACGGCGCGGGGTGCCTT
GATTGATGAGAAGGCCTTGGTTGAGGCGCTGGAGTCGGGCAAGGAAAGTT
CCTCGGCCAGACAGGCCTCGGACACGATCCCCAGAACAAGGTGCTTGGAA
TTCTCGGCATGGGAGGAATCGGCCGTGTATCGCCGTCTCTAGCACTCCCG
TCGCAGTTAACAACGCCACCGCCGACGTGGCAATCTTCCTAATGATTGGC
GCTTTGCGACAGGCATACATTCCCGTCACATCTCTCCGCGAAGTTCACCG
GCCCATTCGACGCAGAATTACTCTCCTTCCTGCCCTCCTCACTCAAGTAC
ATCGCCCACAATGGCGCAGGTTACGATAACATCGACGTCGCGGCCTGCAC
GAAGAAAGATGCCCGCCGCATTGCTGATCGGTGCCATCACCCATTCCATG
CCCGAATGGAATGATCTCTCCTCCATCCTGACCTTGAAGGAATTCCCCTC
CGGAACTCGCGAAGACTTTATTCGCAATTGCCGCGACGGTCAGTACGATG
ATGTAGTCGCCATCTATCGCTCTAATACTTCTACCAAGGTATGGTCTGCT
GGGCTGGATGTCTATGAGAATGAACCCGCCATTGAGCCGGGATTGGTAAA
TAACCCCCGAGTCATGCTGTTGCCGCATATCGGTACGATGACTTATGAGA
CGCAACGGGAGATGGAACTACTGGTGTTGAACAACCTGCGCTCTGGCGTG
GAGACGGGGAAGATGATTACTTTGGTGCCCGAGCAGAAGGATGTGTTTGG
AAAATAGGAGGTGGCTCGTCGTGCGCGCGCCTTCGGAATGACCATCCAGT
ACCACAACCGGTCGCGTCTCTCCCCGGAACTCGAGGACGGAGCGACCTAC
GTCTCGTTTGATGAGCTGCTCGCCAATTCTGATGTTTTGAGTCTGAATCT
GGCGCTGAATGCGTCTACTCGTCATATTATTGGCAAGACGGAGTTCCAGA
AGATGAAGGATGGTGTGATTATTGTCAATACGGCGCGGGGTGCCTTGATT
GATGAGAAGGCCTTGGTTGAGGCGCTGGAGTCGGGCAAGGAAAGTTCCTC
GGCCAGACAGGCCTCGGACACGATCCCCAGAACAAGGTGCTTGGAATTCT
CGGCATGGGAGGAATCGGCCGTGTATCGCCGTCTCTAGCACTCCCGTCGC
AGTTAACAACGCCACCGCCGACGTGGCAATCTTCCTAATGATTGGCGCTT
TGCGACAGGCATACATTCCCGTCACATCTCTCCGCGAAGTTCACCGGCCC
ATTCGACGCAGAATTACTCTCCTTCCTGCCCTCCTCACTCAAGTACATCG
CCCACAATGGCGCAGGTTACGATAACATCGACGTCGCGGCCTGCACGAAG
AAAGATGCCCGCCGCATTGCTGATCGGTGCCATCACCCATTCCATGCCCG
AATGGAATGATCTCTCCTCCATCCTGACCTTGAAGGAATTCCCCTCCGGA
ACTCGCGAAGACTTTATTCGCAATTGCCGCGACGGTCAGTACGATGATGT
AGTCGCCATCTATCGCTCTAATACTTCTACCAAGGTATGGTCTGCTGGGC
TGGATGTCTATGAGAATGAACCCGCCATTGAGCCGGGATTGGTAAATAAC
CCCCGAGTCATGCTGTTGCCGCATATCGGTACGATGACTTATGAGACGCA
ACGGGAGATGGAACTACTGGTGTTGAACAACCTGCGCTCTGGCGTGGAGA
CGGGGAAGATGATTACTTTGGTGCCCGAGCAGAAGGATGTGTTTGGAAAA
TAGGAGGTGGCTCGTCGTGCGCGCGCCTTCGGAATGACCATCCAGTACCA
CAACCGGTCGCGTCTCTCCCCGGAACTCGAGGACGGAGCGACCTACGTCT
CGTTTGATGAGCTGCTCGCCAATTCTGATGTTTTGAGTCTGAATCTGGCG
CTGAATGCGTCTACTCGTCATATTATTGGCAAGACGGAGTTCCAGAAGAT
GAAGGATGGTGTGATTATTGTCAATACGGCGCGGGGTGCCTTGATTGATG
AGAAGGCCTTGGTTGAGGCGCTGGAGTCGGGCAAGGAAAGTTCCTCGGCC
AGACAGGCCTCGGACACGATCCCCAGAACAAGGTGCTTGGAATTCTCGGC
ATGGGAGGAATCGGCCGTGTATCGCCGTCTCTAGCACTCCCGTCGCAGTT
AACAACGCCACCGCCGACGTGGCAATCTTCCTAATGATTGGCGCTTTGCG
ACAGGCATACATTCCCGTCACATCTCTCCGCGAAGTTCACCGGCCCATTC
GACGCAGAATTACTCTCCTTCCTGCCCTCCTCACTCAAGTACATCGCCCA
CAATGGCGCAGGTTACGATAACATCGACGTCGCGGCCTGCACGAAGAAAG
ATGCCCGCCGCATTGCTGATCGGTGCCATCACCCATTCCATGCCCGAATG
GAATGATCTCTCCTCCATCCTGACCTTGAAGGAATTCCCCTCCGGAACTC
GCGAAGACTTTATTCGCAATTGCCGCGACGGTCAGTACGATGATGTAGTC
GCCATCTATCGCTCTAATACTTCTACCAAGGTATGGTCTGCTGGGCTGGA
TGTCTATGAGAATGAACCCGCCATTGAGCCGGGATTGGTAAATAACCCCC
GAGTCATGCTGTTGCCGCATATCGGTACGATGACTTATGAGACGCAACGG
GAGATGGAACTACTGGTGTTGAACAACCTGCGCTCTGGCGTGGAGACGGG
GAAGATGATTACTTTGGTGCCCGAGCAGAAGGATGTGTTTGGAAAATAGG
AGGTGGCTCGTCGTGCGCGCGCCTTCGGAATGACCATCCAGTACCACAAC
CGGTCGCGTCTCTCCCCGGAACTCGAGGACGGAGCGACCTACGTCTCGTT
TGATGAGCTGCTCGCCAATTCTGATGTTTTGAGTCTGAATCTGGCGCTGA
ATGCGTCTACTCGTCATATTATTGGCAAGACGGAGTTCCAGAAGATGAAG
GATGGTGTGATTATTGTCAATACGGCGCGGGGTGCCTTGATTGATGAGAA
GGCCTTGGTTGAGGCGCTGGAGTCGGGCAAGGAAAGTTCCTCGGCCAGAC
AGGCCTCGGACACGATCCCCAGAACAAGGTGCTTGGAATTCTCGGCATGG
GAGGAATCGGCCGTGTATCGCCGTCTCTAGCACTCCCGTCGCAGTTAACA
ACGCCACCGCCGACGTGGCAATCTTCCTAATGATTGGCGCTTTGCGACAG
GCATACATTCCCGTCACATCTCTCCGCGAAGTTCACCGGCCCATTCGACG
CAGAATTACTCTCCTTCCTGCCCTCCTCACTCAAGTACATCGCCCACAAT
GGCGCAGGTTACGATAACATCGACGTCGCGGCCTGCACGAAGAAAGATGC
CCGCCGCATTGCTGATCGGTGCCATCACCCATTCCATGCCCGAATGGAAT
GATCTCTCCTCCATCCTGACCTTGAAGGAATTCCCCTCCGGAACTCGCGA
AGACTTTATTCGCAATTGCCGCGACGGTCAGTACGATGATGTAGTCGCCA
TCTATCGCTCTAATACTTCTACCAAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0016616oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0051287NAD binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_000506KJC3_000506Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000506-T1KJC3_000506-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000506-T1.cdsKJC3_000506-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000506-T1.utr3p1KJC3_000506-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000506-T1.exon6KJC3_000506-T1.exon6Aspergillus niger KJC3exon
KJC3_000506-T1.exon5KJC3_000506-T1.exon5Aspergillus niger KJC3exon
KJC3_000506-T1.exon4KJC3_000506-T1.exon4Aspergillus niger KJC3exon
KJC3_000506-T1.exon3KJC3_000506-T1.exon3Aspergillus niger KJC3exon
KJC3_000506-T1.exon2KJC3_000506-T1.exon2Aspergillus niger KJC3exon
KJC3_000506-T1.exon1KJC3_000506-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000506-T1.utr5p1KJC3_000506-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR029753
DBxrefInterPro:IPR029752
DBxrefInterPro:IPR006139
DBxrefInterPro:IPR006140
DBxrefPFAM:PF02826
DBxrefPFAM:PF00389
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:1051672..1053186 -
Powered by Drupal