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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:1064952..1066673+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000513-T1 ID=KJC3_000513-T1|Name=KJC3_000513-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1722bp|location=Sequence derived from alignment at ch1:1064952..1066673+ (Aspergillus niger KJC3)
CGGTTCAATTAAAGCCTTGACCTCAGCTAGAGTTCTGAAACCTCATCTCC
TTGCATTCTCCCACTCTCAACTGCGTTGGCGCAATGCGGGGGTCCGATGG
CGGAGATATATCCCTTCGCCGACTCGGATGCCGCTTATCAACCGGCCATT
TCCCCTCTGTCCTTTCTCCGCAACTCTTGGAGAGTACCACTGTAGAAAAC
CCTCAAACTACTGGTACGAATCAGTCTATACACGACTGAATCTCTCAAAA
TGACAGACCCTTCGGTGCTCGTGCAATCTTTGACCCCTTCAGCCATCCAT
GAGGCCTACTCCCTCATCCAACCCTATGTGCACCGCACGCCTCTCCTCAC
TTGTCAAACCCTCAACACCATTGCCTCAGCGCCACAATCTCCAGAGGCAT
TGAGCGGCACCTCCTCCGAGGGCCAAACTCCTGCCAATCCCAAGTTCCGT
TTCTTCTTCAAATGTGAAAACTACCAACGGATAGGTGCTTTCAAGGCCCG
GGGCGCCTTCCACGCTCTGCTACGACTCATCGCCGAACGGGGTCAGGAGG
ATGTGCAGAAAAGGGGTGTTATTACACACAGTTCTGGTAGGTCATCACTC
TCGCCAAGCAACAAGATGCAACTTGAAGGGAACCACGCAATATTCATCTA
TTCATGTAGGAAATCACGCACAGGCTCTCGCTCTGGCCGCCTCCACTCTC
GGTGTTCCCGCCTACATTATCATGCCCAGTATTAGCACCCCTTCTAAGAT
CGCTGGGACGCGCTCCCACGGCGCGGAGGTAATTTTCAGTGGGTCCACGA
GCGTCGAGCGCGAGGCCGTCGTCGCGGATGTGCAGGCCAAGACCGGTGCA
ATTCTGATCCCACCCTATGATGACTTCAATATCATCTGCGGCCAGGGTAC
CACCGCCCTCGAACTTGAGGAGCAGTACCGGGAGCTGGTTGCTGAGAAGC
CCAACCTGAGCATCCGCCAGGGTTCCACGGCTCTCGATGCTGTCTTCACA
CCCATCGGTGGGGGCGGTCTCAATTCCGGTGTTGCAACCTTCTTCTCGGA
CAAGACAACTAAGGTGTTTGGTGCGGAACCCAGTTTCGAGGGTGCAGACG
ATTGCCGGCGCGGACTGGATGCCGGGGAGCGGGTTCCGGCAGTGTCCACA
CTGACCATCGCGGACGGGTTGCGGACACCGGTTGGCTTGTTGAACTGGGA
GGTGATCTCGAACCGGAACAAGGTCGCTGGTGTATATGCTGTGACGGAGG
AGCAGATCAAGGCGGCCATGCGTCTGGTTCTGGAACGCATGAAGGTAGTA
GTAGAGCCAAGCGCTGTGGTGGGTTTGGCCGTTTGTCTGTACAACGAGGA
GTTCCGACGACTGGTCGAAAAGGAGGCTCCTGAGGGCTGGGATGTGGGCA
TTGTGTTTAGCGGTGGAAACACCACGGTTGAGGCCATTGGAAAGTTGTTC
AGCTAAGAAAGCATTTAGAATCTGCTGCGGGACACGGTCTCAATCACGCC
TGTACAGTGTACATAGCTAGATGAGAAATTCATCAGCCAATGTCGACCCC
GTCTCCTCCTATGCGAAAGGCGAATTTGCCGCCATTACTTCGTTTCAAGC
CCTCCAGCACCCGACGAGGCCATTCCTCGCGTCTCCATTCATTCACCCAT
CCGGAAAACCTTCCGCGACTGACAATTTCTTGTCGACGAGGCGCTCCGCG
CTGCGCATTCTGCGCAGTCATG back to topCoding sequence (CDS) from alignment at ch1:1064952..1066673+ >KJC3_000513-T1 ID=KJC3_000513-T1|Name=KJC3_000513-T1|organism=Aspergillus niger KJC3|type=CDS|length=2268bp|location=Sequence derived from alignment at ch1:1064952..1066673+ (Aspergillus niger KJC3)
ATGACAGACCCTTCGGTGCTCGTGCAATCTTTGACCCCTTCAGCCATCCA
TGAGGCCTACTCCCTCATCCAACCCTATGTGCACCGCACGCCTCTCCTCA
CTTGTCAAACCCTCAACACCATTGCCTCAGCGCCACAATCTCCAGAGGCA
TTGAGCGGCACCTCCTCCGAGGGCCAAACTCCTGCCAATCCCAAGTTCCG
TTTCTTCTTCAAATGTGAAAACTACCAACGGATAGGTGCTTTCAAGGCCC
GGGGCGCCTTCCACGCTCTGCTACGACTCATCGCCGAACGGGGTCAGGAG
GATGTGCAGAAAAGGGGTGTTATTACACACAGTTCTGGAAATCACGCACA
GGCTCTCGCTCTGGCCGCCTCCACTCTCGGTGTTCCCGCCTACATTATCA
TGCCCAGTATTAGCACCCCTTCTAAGATCGCTGGGACGCGCTCCCACGGC
GCGGAGGTAATTTTCAGTGGGTCCACGAGCGTCGAGCGCGAGGCCGTCGT
CGCGGATGTGCAGGCCAAGACCGGTGCAATTCTGATCCCACCCTATGATG
ACTTCAATATCATCTGCGGCCAGGGTACCACCGCCCTCGAACTTGAGGAG
CAGTACCGGGAGCTGGTTGCTGAGAAGCCCAACCTGAGCATCCGCCAGGG
TTCCACGGCTCTCGATGCTGTCTTCACACCCATCGGTGGGGGCGGTCTCA
ATTCCGGTGTTGCAACCTTCTTCTCGGACAAGACAACTAAGGTGTTTGGT
GCGGAACCCAGTTTCGAGGGTGCAGACGATTGCCGGCGCGGACTGGATGC
CGGGGAGCGGGTTCCGGCAGTGTCCACACTGACCATCGCGGACGGGTTGC
GGACACCGGTTGGCTTGTTGAACTGGGAGGTGATCTCGAACCGGAACAAG
GTCGCTGGTGTATATGCTGTGACGGAGGAGCAGATCAAGGCGGCCATGCG
TCTGGTTCTGGAACGCATGAAGGTAGTAGTAGAGCCAAGCGCTGTGGTGG
GTTTGGCCGTTTGTCTGTACAACGAGGAGTTCCGACGACTGGTCGAAAAG
GAGGCTCCTGAGGGCTGGGATGTGGGCATTGTGTTTAGCGGTGGAAACAC
CACGGTTGAGGCCATTGGAAAGTTGTTCAGCTAAATGACAGACCCTTCGG
TGCTCGTGCAATCTTTGACCCCTTCAGCCATCCATGAGGCCTACTCCCTC
ATCCAACCCTATGTGCACCGCACGCCTCTCCTCACTTGTCAAACCCTCAA
CACCATTGCCTCAGCGCCACAATCTCCAGAGGCATTGAGCGGCACCTCCT
CCGAGGGCCAAACTCCTGCCAATCCCAAGTTCCGTTTCTTCTTCAAATGT
GAAAACTACCAACGGATAGGTGCTTTCAAGGCCCGGGGCGCCTTCCACGC
TCTGCTACGACTCATCGCCGAACGGGGTCAGGAGGATGTGCAGAAAAGGG
GTGTTATTACACACAGTTCTGGAAATCACGCACAGGCTCTCGCTCTGGCC
GCCTCCACTCTCGGTGTTCCCGCCTACATTATCATGCCCAGTATTAGCAC
CCCTTCTAAGATCGCTGGGACGCGCTCCCACGGCGCGGAGGTAATTTTCA
GTGGGTCCACGAGCGTCGAGCGCGAGGCCGTCGTCGCGGATGTGCAGGCC
AAGACCGGTGCAATTCTGATCCCACCCTATGATGACTTCAATATCATCTG
CGGCCAGGGTACCACCGCCCTCGAACTTGAGGAGCAGTACCGGGAGCTGG
TTGCTGAGAAGCCCAACCTGAGCATCCGCCAGGGTTCCACGGCTCTCGAT
GCTGTCTTCACACCCATCGGTGGGGGCGGTCTCAATTCCGGTGTTGCAAC
CTTCTTCTCGGACAAGACAACTAAGGTGTTTGGTGCGGAACCCAGTTTCG
AGGGTGCAGACGATTGCCGGCGCGGACTGGATGCCGGGGAGCGGGTTCCG
GCAGTGTCCACACTGACCATCGCGGACGGGTTGCGGACACCGGTTGGCTT
GTTGAACTGGGAGGTGATCTCGAACCGGAACAAGGTCGCTGGTGTATATG
CTGTGACGGAGGAGCAGATCAAGGCGGCCATGCGTCTGGTTCTGGAACGC
ATGAAGGTAGTAGTAGAGCCAAGCGCTGTGGTGGGTTTGGCCGTTTGTCT
GTACAACGAGGAGTTCCGACGACTGGTCGAAAAGGAGGCTCCTGAGGGCT
GGGATGTGGGCATTGTGTTTAGCGGTGGAAACACCACGGTTGAGGCCATT
GGAAAGTTGTTCAGCTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000513-T1.utr5p1 | KJC3_000513-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000513-T1.utr3p1 | KJC3_000513-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR001926 |
| DBxref | InterPro:IPR036052 |
| DBxref | PFAM:PF00291 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:1064952..1066673 + |
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