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KJC3_000516-T1, KJC3_000516-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_000516-T1
Unique NameKJC3_000516-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:1068837..1069964-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_000516-T1 ID=KJC3_000516-T1|Name=KJC3_000516-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1128bp|location=Sequence derived from alignment at ch1:1068837..1069964- (Aspergillus niger KJC3)
CCGGCGCCATGGTCTCCTCGGAACCCACTGTCAAACGATCCTCTTCCTCC
TTACCAGAAGGTGCAGACGCTCCTGATGTAAAACCAACGAAACGCCCATA
TCACCATCATCATCGCCTACAAAGTCCGGTCGCCCCAGCGTTGCCGGAAC
CCGCTATTGTCGACGAGGCCTGCATCGACCATGTCCTCAACCGGTCTATC
GGGCAGTATCTACAAGAATGCGGATTTGATATCGCCGACCCTGCAGCGCT
GGACGCCTTTCGCAGGATAACGGAGGAATGTATGTTGGAAAATTAGGTCT
CAGAAGGAAACGTTCATGATATTGATGGATTTGGTTCTAGATCTGCTGAG
ATTCGCCTCATATGTGCGCCAAGCGATGCTATCCAGCCGGCGCATACAAC
CTATCCCACAAGATTTCGAATATGCCTTGAAAAGACAGTCCGTGCCTGTC
GGCGACCTCCTTCCGCACGTGAAACGCCATCCAAACATCGACCCTATCCC
CACCCTCCTACCAAGCCCTCCGCCGGAAGAGGACTCATTCAAGACTTTGC
CGTCTTTAGGCCCGCAGCTCAGCGGCGAAGATGATCGCGTTCACAACGCT
CATATTCCGAAACATTTCCCCGATTTCCCTAGTAAACACACGTATCGTCA
CACGCCGGTTTTCACAGAACGAGAGCAAGATCCGCGCGTCATTCGAGAGC
GAGCCACGGAGGATGGTCGACATGGCGAGGAGGCGTTGCGCAAGTTGGCT
CGTGCAGCGTTCAAAGACAACAATTCTGGCTCATCGGTCCGGGATAAGAA
GCAATGGGGACGACGAGCAGAGAGCATGGACGGAATGTTTGAGAAGACGA
TCAGGGCTCTCGCAAAGAAGATGCAGAAGCCTGCGACGGCCCCAGGTTCT
GCTGGTCCTATGGAGATCGACTCGGGAGCTGGTGCAGATACAGAGGCCAA
ACCATCCCGCTCGAAGCTGGCGTTGAACATAGAGCTGCCTCCCATCATCA
ACTGCGAGAGAGACTTGTGGCGACGGGCGCCTACATCTGGGAGTCGACGA
ACAGAAGAAAACAAGCTATCAAGTGCGAAAGATACGCCCGACATGTCGAG
GGTGGATAGCTGGGTGAATGCATCATGA
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Coding sequence (CDS) from alignment at ch1:1068837..1069964-

>KJC3_000516-T1 ID=KJC3_000516-T1|Name=KJC3_000516-T1|organism=Aspergillus niger KJC3|type=CDS|length=2118bp|location=Sequence derived from alignment at ch1:1068837..1069964- (Aspergillus niger KJC3)
ATCTGCTGAGATTCGCCTCATATGTGCGCCAAGCGATGCTATCCAGCCGG
CGCATACAACCTATCCCACAAGATTTCGAATATGCCTTGAAAAGACAGTC
CGTGCCTGTCGGCGACCTCCTTCCGCACGTGAAACGCCATCCAAACATCG
ACCCTATCCCCACCCTCCTACCAAGCCCTCCGCCGGAAGAGGACTCATTC
AAGACTTTGCCGTCTTTAGGCCCGCAGCTCAGCGGCGAAGATGATCGCGT
TCACAACGCTCATATTCCGAAACATTTCCCCGATTTCCCTAGTAAACACA
CGTATCGTCACACGCCGGTTTTCACAGAACGAGAGCAAGATCCGCGCGTC
ATTCGAGAGCGAGCCACGGAGGATGGTCGACATGGCGAGGAGGCGTTGCG
CAAGTTGGCTCGTGCAGCGTTCAAAGACAACAATTCTGGCTCATCGGTCC
GGGATAAGAAGCAATGGGGACGACGAGCAGAGAGCATGGACGGAATGTTT
GAGAAGACGATCAGGGCTCTCGCAAAGAAGATGCAGAAGCCTGCGACGGC
CCCAGGTTCTGCTGGTCCTATGGAGATCGACTCGGGAGCTGGTGCAGATA
CAGAGGCCAAACCATCCCGCTCGAAGCTGGCGTTGAACATAGAGCTGCCT
CCCATCATCAACTGCGAGAGAGACTTGTGGCGACGGGCGCCTACATCTGG
GAGTCGACGAACAGAAGAAAACAAGCTATCAAGTGCGAAAGATACGCCCG
ACATGTCGAGGGTGGATAGCTGGGTGAATGCATCATGAATGGTCTCCTCG
GAACCCACTGTCAAACGATCCTCTTCCTCCTTACCAGAAGGTGCAGACGC
TCCTGATGTAAAACCAACGAAACGCCCATATCACCATCATCATCGCCTAC
AAAGTCCGGTCGCCCCAGCGTTGCCGGAACCCGCTATTGTCGACGAGGCC
TGCATCGACCATGTCCTCAACCGGTCTATCGGGCAGTATCTACAAGAATG
CGGATTTGATATCGCCGACCCTGCAGCGCTGGACGCCTTTCGCAGGATAA
CGGAGGAATATCTGCTGAGATTCGCCTCATATGTGCGCCAAGCGATGCTA
TCCAGCCGGCGCATACAACCTATCCCACAAGATTTCGAATATGCCTTGAA
AAGACAGTCCGTGCCTGTCGGCGACCTCCTTCCGCACGTGAAACGCCATC
CAAACATCGACCCTATCCCCACCCTCCTACCAAGCCCTCCGCCGGAAGAG
GACTCATTCAAGACTTTGCCGTCTTTAGGCCCGCAGCTCAGCGGCGAAGA
TGATCGCGTTCACAACGCTCATATTCCGAAACATTTCCCCGATTTCCCTA
GTAAACACACGTATCGTCACACGCCGGTTTTCACAGAACGAGAGCAAGAT
CCGCGCGTCATTCGAGAGCGAGCCACGGAGGATGGTCGACATGGCGAGGA
GGCGTTGCGCAAGTTGGCTCGTGCAGCGTTCAAAGACAACAATTCTGGCT
CATCGGTCCGGGATAAGAAGCAATGGGGACGACGAGCAGAGAGCATGGAC
GGAATGTTTGAGAAGACGATCAGGGCTCTCGCAAAGAAGATGCAGAAGCC
TGCGACGGCCCCAGGTTCTGCTGGTCCTATGGAGATCGACTCGGGAGCTG
GTGCAGATACAGAGGCCAAACCATCCCGCTCGAAGCTGGCGTTGAACATA
GAGCTGCCTCCCATCATCAACTGCGAGAGAGACTTGTGGCGACGGGCGCC
TACATCTGGGAGTCGACGAACAGAAGAAAACAAGCTATCAAGTGCGAAAG
ATACGCCCGACATGTCGAGGGTGGATAGCTGGGTGAATGCATCATGAATG
GTCTCCTCGGAACCCACTGTCAAACGATCCTCTTCCTCCTTACCAGAAGG
TGCAGACGCTCCTGATGTAAAACCAACGAAACGCCCATATCACCATCATC
ATCGCCTACAAAGTCCGGTCGCCCCAGCGTTGCCGGAACCCGCTATTGTC
GACGAGGCCTGCATCGACCATGTCCTCAACCGGTCTATCGGGCAGTATCT
ACAAGAATGCGGATTTGATATCGCCGACCCTGCAGCGCTGGACGCCTTTC
GCAGGATAACGGAGGAAT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0046982protein heterodimerization activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_000516KJC3_000516Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000516-T1KJC3_000516-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000516-T1.cdsKJC3_000516-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000516-T1.exon2KJC3_000516-T1.exon2Aspergillus niger KJC3exon
KJC3_000516-T1.exon1KJC3_000516-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000516-T1.utr5p1KJC3_000516-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR009072
DBxrefInterPro:IPR019473
DBxrefInterPro:IPR006565
DBxrefPFAM:PF10406
DBxrefPFAM:PF07524
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:1068837..1069964 -
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