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KJC3_000518-T1, KJC3_000518-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_000518-T1
Unique NameKJC3_000518-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:1071595..1072427-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_000518-T1 ID=KJC3_000518-T1|Name=KJC3_000518-T1|organism=Aspergillus niger KJC3|type=mRNA|length=833bp|location=Sequence derived from alignment at ch1:1071595..1072427- (Aspergillus niger KJC3)
ATGTTGAAGATATGGTCGATGGTATGTCGCGACTGACTCCATCTACCTAC
CAACCCATACATTTCCCTCCCCACTAACACCCTTGAAACAGAAACAACAA
CAGCAGCAAGCTGAAAATGCCGAAGGAGCTGCTGGTAAAAAGAAGAAGAA
GGTCACCGCCGCCCAGCTGCGCGTGCAACGAGGTCTGTCCCTCCCTCCCT
CCCTCCCTACCTACCCTTTCTCAAACCACACCCCTCCCCAGGACGTTAAT
AACTAACCATGTATCAACATCGAGATAGACCTGCAAGAGCTCACCCTCGG
AAGTACAATGAAAATGTCCTTCCCGAACCCCGACGACATCTTGAACTTCA
CTCTTACTATCGAGCCGGATGAGGGCATGTACAAGGGCGGCGCATTCCAC
TTCAACTTCACGGTTAACCAGAATTTCCCGCATGATCCGCCGAAGGTCAA
GTGCACGCAGAAGATCTACCATCCGAATATTGATCTCGAGGGAAATGTGT
GCTTGAATATTTTGAGGGAGGATTGGAAGCCTGTCTTGAACCTGAATGCT
GTTATTGTGGGGATGCAGGTATGTCTTTTTCTTTTCCTCCCTTTCGGTAT
TGTTTTTGGTTGCTTTGGGGAGAGGGCGAGAGTTTGGATGCTTTTGGAGG
GTGTTTTGCTGATCTTTCTACCTTGCTTAGTTCCTCTTCCTGGAACCGAA
TGCTTCCGATCCGCTGAACAAGGAGGCCGCCGACGATCTGAGACAGAATC
GGGAAGCGTTCAAGCGCAACGTCAGGACGTCTATGGGTGGTGGTAGCGTG
AGGGGGATACAGTATGAGCGGGTTATGCGGTGA
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Coding sequence (CDS) from alignment at ch1:1071595..1072427-

>KJC3_000518-T1 ID=KJC3_000518-T1|Name=KJC3_000518-T1|organism=Aspergillus niger KJC3|type=CDS|length=2220bp|location=Sequence derived from alignment at ch1:1071595..1072427- (Aspergillus niger KJC3)
TTCCTCTTCCTGGAACCGAATGCTTCCGATCCGCTGAACAAGGAGGCCGC
CGACGATCTGAGACAGAATCGGGAAGCGTTCAAGCGCAACGTCAGGACGT
CTATGGGTGGTGGTAGCGTGAGGGGGATACAGTATGAGCGGGTTATGCGG
TGAACCTGCAAGAGCTCACCCTCGGAAGTACAATGAAAATGTCCTTCCCG
AACCCCGACGACATCTTGAACTTCACTCTTACTATCGAGCCGGATGAGGG
CATGTACAAGGGCGGCGCATTCCACTTCAACTTCACGGTTAACCAGAATT
TCCCGCATGATCCGCCGAAGGTCAAGTGCACGCAGAAGATCTACCATCCG
AATATTGATCTCGAGGGAAATGTGTGCTTGAATATTTTGAGGGAGGATTG
GAAGCCTGTCTTGAACCTGAATGCTGTTATTGTGGGGATGCAGAAACAAC
AACAGCAGCAAGCTGAAAATGCCGAAGGAGCTGCTGGTAAAAAGAAGAAG
AAGGTCACCGCCGCCCAGCTGCGCGTGCAACGAGATGTTGAAGATATGGT
CGATGTTCCTCTTCCTGGAACCGAATGCTTCCGATCCGCTGAACAAGGAG
GCCGCCGACGATCTGAGACAGAATCGGGAAGCGTTCAAGCGCAACGTCAG
GACGTCTATGGGTGGTGGTAGCGTGAGGGGGATACAGTATGAGCGGGTTA
TGCGGTGAACCTGCAAGAGCTCACCCTCGGAAGTACAATGAAAATGTCCT
TCCCGAACCCCGACGACATCTTGAACTTCACTCTTACTATCGAGCCGGAT
GAGGGCATGTACAAGGGCGGCGCATTCCACTTCAACTTCACGGTTAACCA
GAATTTCCCGCATGATCCGCCGAAGGTCAAGTGCACGCAGAAGATCTACC
ATCCGAATATTGATCTCGAGGGAAATGTGTGCTTGAATATTTTGAGGGAG
GATTGGAAGCCTGTCTTGAACCTGAATGCTGTTATTGTGGGGATGCAGAA
ACAACAACAGCAGCAAGCTGAAAATGCCGAAGGAGCTGCTGGTAAAAAGA
AGAAGAAGGTCACCGCCGCCCAGCTGCGCGTGCAACGAGATGTTGAAGAT
ATGGTCGATGTTCCTCTTCCTGGAACCGAATGCTTCCGATCCGCTGAACA
AGGAGGCCGCCGACGATCTGAGACAGAATCGGGAAGCGTTCAAGCGCAAC
GTCAGGACGTCTATGGGTGGTGGTAGCGTGAGGGGGATACAGTATGAGCG
GGTTATGCGGTGAACCTGCAAGAGCTCACCCTCGGAAGTACAATGAAAAT
GTCCTTCCCGAACCCCGACGACATCTTGAACTTCACTCTTACTATCGAGC
CGGATGAGGGCATGTACAAGGGCGGCGCATTCCACTTCAACTTCACGGTT
AACCAGAATTTCCCGCATGATCCGCCGAAGGTCAAGTGCACGCAGAAGAT
CTACCATCCGAATATTGATCTCGAGGGAAATGTGTGCTTGAATATTTTGA
GGGAGGATTGGAAGCCTGTCTTGAACCTGAATGCTGTTATTGTGGGGATG
CAGAAACAACAACAGCAGCAAGCTGAAAATGCCGAAGGAGCTGCTGGTAA
AAAGAAGAAGAAGGTCACCGCCGCCCAGCTGCGCGTGCAACGAGATGTTG
AAGATATGGTCGATGTTCCTCTTCCTGGAACCGAATGCTTCCGATCCGCT
GAACAAGGAGGCCGCCGACGATCTGAGACAGAATCGGGAAGCGTTCAAGC
GCAACGTCAGGACGTCTATGGGTGGTGGTAGCGTGAGGGGGATACAGTAT
GAGCGGGTTATGCGGTGAACCTGCAAGAGCTCACCCTCGGAAGTACAATG
AAAATGTCCTTCCCGAACCCCGACGACATCTTGAACTTCACTCTTACTAT
CGAGCCGGATGAGGGCATGTACAAGGGCGGCGCATTCCACTTCAACTTCA
CGGTTAACCAGAATTTCCCGCATGATCCGCCGAAGGTCAAGTGCACGCAG
AAGATCTACCATCCGAATATTGATCTCGAGGGAAATGTGTGCTTGAATAT
TTTGAGGGAGGATTGGAAGCCTGTCTTGAACCTGAATGCTGTTATTGTGG
GGATGCAGAAACAACAACAGCAGCAAGCTGAAAATGCCGAAGGAGCTGCT
GGTAAAAAGAAGAAGAAGGTCACCGCCGCCCAGCTGCGCGTGCAACGAGA
TGTTGAAGATATGGTCGATG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
UBC12KJC3_000518Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000518-T1KJC3_000518-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000518-T1.cdsKJC3_000518-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000518-T1.exon4KJC3_000518-T1.exon4Aspergillus niger KJC3exon
KJC3_000518-T1.exon3KJC3_000518-T1.exon3Aspergillus niger KJC3exon
KJC3_000518-T1.exon2KJC3_000518-T1.exon2Aspergillus niger KJC3exon
KJC3_000518-T1.exon1KJC3_000518-T1.exon1Aspergillus niger KJC3exon


Properties
Property NameValue
NoteBUSCO:EOG09265FCK
DBxrefInterPro:IPR023313
DBxrefInterPro:IPR016135
DBxrefInterPro:IPR000608
DBxrefPFAM:PF00179
ProductNEDD8-conjugating protein ubc12
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:1071595..1072427 -
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