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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:1100816..1102124+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000527-T1 ID=KJC3_000527-T1|Name=KJC3_000527-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1309bp|location=Sequence derived from alignment at ch1:1100816..1102124+ (Aspergillus niger KJC3)
CTCGCATGCAACTCTTCACGCCTGAGTAGCTTGTCGTCAACACTTCAATT
CCAGGAACTTCCCTCACAGCCATCATGTCCGCTACTAAGGATAAGTCCAA
GGTTCACAAGCTGTCCTTGAAAGGTACGGACCAATAGTTCGTGAGATATC
AACAGAAGCTTATACACAGCAGGATCGGCGAAGCTGGTGGCCGAATTCGT
GAGTTTTTCTTTCTTGACTGAGGTATCACCCAGATATACTAATGAATCTA
GTTTGAATATTCTATCAACTCGATCCTGTAGGTTTATCGGTGATGCTTAC
AGGGAATTGCTCATCTGACTCCTTCCAGCTTCCAGAGAGGCGTTTACCCT
CCAGAGGATTTCACAACGTGAGTGTCTTACACCTGCCAATGTGGAAGCAA
ACTAACCAGTTCTCTAAAGTGTCAAGAAATATGGCCTCAATATGCTGGGT
TGGTCATCACGATTCTGGTATCCGAGTCCCCTCGTTGACCGATAATAGTT
ACCGCCGACGACCAGGTCAAAGCCTACATCAAGAAGATTATGTCGCAGTT
GAACAAATGGATGACGGGTGGCAAGATCTCTAAGCTTGTCATTGTCATAA
CGGACAAGGAAACCGGTGAACATGTGGAAAGATGGCAGTTCGATGTACGC
AAGTCAATCCTCCTCACGGGATACAGGGCTAACGAGGTATCAGGTGCAAA
TCTTTGGAAAGCATTCCAAGAGCCAGTCATCCCGCACTTCTGGTGACAAG
GAGAACGCTGCTCCTGGGTAAGTCTGACACTATGCATCCCACTCTACACC
ACTAACCATGTTTTGCTCTACAGGGACAAGGAACCCCAAGCCGCTGCCAC
CGTTGAGAAAACCGAGAAAGAGATCCAAGATGAAATCCAGGCTATCTTCC
GCCAGATCACCGCATCTGTCACATTCCTGCCAGTCCTGGATGGCGACTGC
ACATTCAACGTCCTGGTGTACGCTGACGCCGACTCCGAGGTCCCCGTGGA
ATGGGGCGACAGCGACGCCAAAGAAATCAAGAACGCAGAGAAGGTGCAGC
TCCGAAGCTTCAGCACCAACAATCACCGCGTAGAGACTCTAGTCAGCTAC
CGTCTTGCTGATTAGTTCACTTCGACACATCATCAGGTGTTCAAAGGGAG
GCGTTACGGAAGAGAGGGCGGGATCTGAATTCGGGAGCATTTCGGGCATC
TTTTCATCAAAGTGTATTCTATATCTATTTTCTCACAACTAGCATGATTG
CTATCTACCAATGACTAACGAATTTGCATCATTGCAACTGTCCCCACCAA
GGCAACTCC back to topCoding sequence (CDS) from alignment at ch1:1100816..1102124+ >KJC3_000527-T1 ID=KJC3_000527-T1|Name=KJC3_000527-T1|organism=Aspergillus niger KJC3|type=CDS|length=5448bp|location=Sequence derived from alignment at ch1:1100816..1102124+ (Aspergillus niger KJC3)
ATGTCCGCTACTAAGGATAAGTCCAAGGTTCACAAGCTGTCCTTGAAAGG
ATCGGCGAAGCTGGTGGCCGAATTCTTTGAATATTCTATCAACTCGATCC
TCTTCCAGAGAGGCGTTTACCCTCCAGAGGATTTCACAACTGTCAAGAAA
TATGGCCTCAATATGCTGGTTACCGCCGACGACCAGGTCAAAGCCTACAT
CAAGAAGATTATGTCGCAGTTGAACAAATGGATGACGGGTGGCAAGATCT
CTAAGCTTGTCATTGTCATAACGGACAAGGAAACCGGTGAACATGTGGAA
AGATGGCAGTTCGATGTGCAAATCTTTGGAAAGCATTCCAAGAGCCAGTC
ATCCCGCACTTCTGGTGACAAGGAGAACGCTGCTCCTGGGGACAAGGAAC
CCCAAGCCGCTGCCACCGTTGAGAAAACCGAGAAAGAGATCCAAGATGAA
ATCCAGGCTATCTTCCGCCAGATCACCGCATCTGTCACATTCCTGCCAGT
CCTGGATGGCGACTGCACATTCAACGTCCTGGTGTACGCTGACGCCGACT
CCGAGGTCCCCGTGGAATGGGGCGACAGCGACGCCAAAGAAATCAAGAAC
GCAGAGAAGGTGCAGCTCCGAAGCTTCAGCACCAACAATCACCGCGTAGA
GACTCTAGTCAGCTACCGTCTTGCTGATTAGATGTCCGCTACTAAGGATA
AGTCCAAGGTTCACAAGCTGTCCTTGAAAGGATCGGCGAAGCTGGTGGCC
GAATTCTTTGAATATTCTATCAACTCGATCCTCTTCCAGAGAGGCGTTTA
CCCTCCAGAGGATTTCACAACTGTCAAGAAATATGGCCTCAATATGCTGG
TTACCGCCGACGACCAGGTCAAAGCCTACATCAAGAAGATTATGTCGCAG
TTGAACAAATGGATGACGGGTGGCAAGATCTCTAAGCTTGTCATTGTCAT
AACGGACAAGGAAACCGGTGAACATGTGGAAAGATGGCAGTTCGATGTGC
AAATCTTTGGAAAGCATTCCAAGAGCCAGTCATCCCGCACTTCTGGTGAC
AAGGAGAACGCTGCTCCTGGGGACAAGGAACCCCAAGCCGCTGCCACCGT
TGAGAAAACCGAGAAAGAGATCCAAGATGAAATCCAGGCTATCTTCCGCC
AGATCACCGCATCTGTCACATTCCTGCCAGTCCTGGATGGCGACTGCACA
TTCAACGTCCTGGTGTACGCTGACGCCGACTCCGAGGTCCCCGTGGAATG
GGGCGACAGCGACGCCAAAGAAATCAAGAACGCAGAGAAGGTGCAGCTCC
GAAGCTTCAGCACCAACAATCACCGCGTAGAGACTCTAGTCAGCTACCGT
CTTGCTGATTAGATGTCCGCTACTAAGGATAAGTCCAAGGTTCACAAGCT
GTCCTTGAAAGGATCGGCGAAGCTGGTGGCCGAATTCTTTGAATATTCTA
TCAACTCGATCCTCTTCCAGAGAGGCGTTTACCCTCCAGAGGATTTCACA
ACTGTCAAGAAATATGGCCTCAATATGCTGGTTACCGCCGACGACCAGGT
CAAAGCCTACATCAAGAAGATTATGTCGCAGTTGAACAAATGGATGACGG
GTGGCAAGATCTCTAAGCTTGTCATTGTCATAACGGACAAGGAAACCGGT
GAACATGTGGAAAGATGGCAGTTCGATGTGCAAATCTTTGGAAAGCATTC
CAAGAGCCAGTCATCCCGCACTTCTGGTGACAAGGAGAACGCTGCTCCTG
GGGACAAGGAACCCCAAGCCGCTGCCACCGTTGAGAAAACCGAGAAAGAG
ATCCAAGATGAAATCCAGGCTATCTTCCGCCAGATCACCGCATCTGTCAC
ATTCCTGCCAGTCCTGGATGGCGACTGCACATTCAACGTCCTGGTGTACG
CTGACGCCGACTCCGAGGTCCCCGTGGAATGGGGCGACAGCGACGCCAAA
GAAATCAAGAACGCAGAGAAGGTGCAGCTCCGAAGCTTCAGCACCAACAA
TCACCGCGTAGAGACTCTAGTCAGCTACCGTCTTGCTGATTAGATGTCCG
CTACTAAGGATAAGTCCAAGGTTCACAAGCTGTCCTTGAAAGGATCGGCG
AAGCTGGTGGCCGAATTCTTTGAATATTCTATCAACTCGATCCTCTTCCA
GAGAGGCGTTTACCCTCCAGAGGATTTCACAACTGTCAAGAAATATGGCC
TCAATATGCTGGTTACCGCCGACGACCAGGTCAAAGCCTACATCAAGAAG
ATTATGTCGCAGTTGAACAAATGGATGACGGGTGGCAAGATCTCTAAGCT
TGTCATTGTCATAACGGACAAGGAAACCGGTGAACATGTGGAAAGATGGC
AGTTCGATGTGCAAATCTTTGGAAAGCATTCCAAGAGCCAGTCATCCCGC
ACTTCTGGTGACAAGGAGAACGCTGCTCCTGGGGACAAGGAACCCCAAGC
CGCTGCCACCGTTGAGAAAACCGAGAAAGAGATCCAAGATGAAATCCAGG
CTATCTTCCGCCAGATCACCGCATCTGTCACATTCCTGCCAGTCCTGGAT
GGCGACTGCACATTCAACGTCCTGGTGTACGCTGACGCCGACTCCGAGGT
CCCCGTGGAATGGGGCGACAGCGACGCCAAAGAAATCAAGAACGCAGAGA
AGGTGCAGCTCCGAAGCTTCAGCACCAACAATCACCGCGTAGAGACTCTA
GTCAGCTACCGTCTTGCTGATTAGATGTCCGCTACTAAGGATAAGTCCAA
GGTTCACAAGCTGTCCTTGAAAGGATCGGCGAAGCTGGTGGCCGAATTCT
TTGAATATTCTATCAACTCGATCCTCTTCCAGAGAGGCGTTTACCCTCCA
GAGGATTTCACAACTGTCAAGAAATATGGCCTCAATATGCTGGTTACCGC
CGACGACCAGGTCAAAGCCTACATCAAGAAGATTATGTCGCAGTTGAACA
AATGGATGACGGGTGGCAAGATCTCTAAGCTTGTCATTGTCATAACGGAC
AAGGAAACCGGTGAACATGTGGAAAGATGGCAGTTCGATGTGCAAATCTT
TGGAAAGCATTCCAAGAGCCAGTCATCCCGCACTTCTGGTGACAAGGAGA
ACGCTGCTCCTGGGGACAAGGAACCCCAAGCCGCTGCCACCGTTGAGAAA
ACCGAGAAAGAGATCCAAGATGAAATCCAGGCTATCTTCCGCCAGATCAC
CGCATCTGTCACATTCCTGCCAGTCCTGGATGGCGACTGCACATTCAACG
TCCTGGTGTACGCTGACGCCGACTCCGAGGTCCCCGTGGAATGGGGCGAC
AGCGACGCCAAAGAAATCAAGAACGCAGAGAAGGTGCAGCTCCGAAGCTT
CAGCACCAACAATCACCGCGTAGAGACTCTAGTCAGCTACCGTCTTGCTG
ATTAGATGTCCGCTACTAAGGATAAGTCCAAGGTTCACAAGCTGTCCTTG
AAAGGATCGGCGAAGCTGGTGGCCGAATTCTTTGAATATTCTATCAACTC
GATCCTCTTCCAGAGAGGCGTTTACCCTCCAGAGGATTTCACAACTGTCA
AGAAATATGGCCTCAATATGCTGGTTACCGCCGACGACCAGGTCAAAGCC
TACATCAAGAAGATTATGTCGCAGTTGAACAAATGGATGACGGGTGGCAA
GATCTCTAAGCTTGTCATTGTCATAACGGACAAGGAAACCGGTGAACATG
TGGAAAGATGGCAGTTCGATGTGCAAATCTTTGGAAAGCATTCCAAGAGC
CAGTCATCCCGCACTTCTGGTGACAAGGAGAACGCTGCTCCTGGGGACAA
GGAACCCCAAGCCGCTGCCACCGTTGAGAAAACCGAGAAAGAGATCCAAG
ATGAAATCCAGGCTATCTTCCGCCAGATCACCGCATCTGTCACATTCCTG
CCAGTCCTGGATGGCGACTGCACATTCAACGTCCTGGTGTACGCTGACGC
CGACTCCGAGGTCCCCGTGGAATGGGGCGACAGCGACGCCAAAGAAATCA
AGAACGCAGAGAAGGTGCAGCTCCGAAGCTTCAGCACCAACAATCACCGC
GTAGAGACTCTAGTCAGCTACCGTCTTGCTGATTAGATGTCCGCTACTAA
GGATAAGTCCAAGGTTCACAAGCTGTCCTTGAAAGGATCGGCGAAGCTGG
TGGCCGAATTCTTTGAATATTCTATCAACTCGATCCTCTTCCAGAGAGGC
GTTTACCCTCCAGAGGATTTCACAACTGTCAAGAAATATGGCCTCAATAT
GCTGGTTACCGCCGACGACCAGGTCAAAGCCTACATCAAGAAGATTATGT
CGCAGTTGAACAAATGGATGACGGGTGGCAAGATCTCTAAGCTTGTCATT
GTCATAACGGACAAGGAAACCGGTGAACATGTGGAAAGATGGCAGTTCGA
TGTGCAAATCTTTGGAAAGCATTCCAAGAGCCAGTCATCCCGCACTTCTG
GTGACAAGGAGAACGCTGCTCCTGGGGACAAGGAACCCCAAGCCGCTGCC
ACCGTTGAGAAAACCGAGAAAGAGATCCAAGATGAAATCCAGGCTATCTT
CCGCCAGATCACCGCATCTGTCACATTCCTGCCAGTCCTGGATGGCGACT
GCACATTCAACGTCCTGGTGTACGCTGACGCCGACTCCGAGGTCCCCGTG
GAATGGGGCGACAGCGACGCCAAAGAAATCAAGAACGCAGAGAAGGTGCA
GCTCCGAAGCTTCAGCACCAACAATCACCGCGTAGAGACTCTAGTCAGCT
ACCGTCTTGCTGATTAGATGTCCGCTACTAAGGATAAGTCCAAGGTTCAC
AAGCTGTCCTTGAAAGGATCGGCGAAGCTGGTGGCCGAATTCTTTGAATA
TTCTATCAACTCGATCCTCTTCCAGAGAGGCGTTTACCCTCCAGAGGATT
TCACAACTGTCAAGAAATATGGCCTCAATATGCTGGTTACCGCCGACGAC
CAGGTCAAAGCCTACATCAAGAAGATTATGTCGCAGTTGAACAAATGGAT
GACGGGTGGCAAGATCTCTAAGCTTGTCATTGTCATAACGGACAAGGAAA
CCGGTGAACATGTGGAAAGATGGCAGTTCGATGTGCAAATCTTTGGAAAG
CATTCCAAGAGCCAGTCATCCCGCACTTCTGGTGACAAGGAGAACGCTGC
TCCTGGGGACAAGGAACCCCAAGCCGCTGCCACCGTTGAGAAAACCGAGA
AAGAGATCCAAGATGAAATCCAGGCTATCTTCCGCCAGATCACCGCATCT
GTCACATTCCTGCCAGTCCTGGATGGCGACTGCACATTCAACGTCCTGGT
GTACGCTGACGCCGACTCCGAGGTCCCCGTGGAATGGGGCGACAGCGACG
CCAAAGAAATCAAGAACGCAGAGAAGGTGCAGCTCCGAAGCTTCAGCACC
AACAATCACCGCGTAGAGACTCTAGTCAGCTACCGTCTTGCTGATTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000527-T1.utr5p1 | KJC3_000527-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000527-T1.utr3p1 | KJC3_000527-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09264BJC |
| DBxref | InterPro:IPR036570 |
| DBxref | InterPro:IPR003511 |
| DBxref | PFAM:PF02301 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:1100816..1102124 + |
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