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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:1112560..1113867- Legend: polypeptideCDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000531-T1 ID=KJC3_000531-T1|Name=KJC3_000531-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1308bp|location=Sequence derived from alignment at ch1:1112560..1113867- (Aspergillus niger KJC3)
ATGGCCTCAACTGATCAATTTGCCCAAAACGTCACCTTCCATACTGGCGA
TGGAACCCCCTTCGAGGTGAATGTGCAGGAAATTGACACATTCTTGCAGT
ACTGTATTCAGATCTGCACCAACTATGGCGCCCAGCTCGGAGCTTCCATC
GTGCTCTTCGTCATCCTCCTGCTCCTGACCAGACCCGAGAAGCGCAGCTC
CAGCGTCTTCATCCTCAATTGCGCTGCACTGCTCTCCAACGTCGGCCGTC
TCTTTTGCCAGATCTTGTATTTCACTACCGACTTCGTGAGAGTGTATGCC
TACTTCTCAGGAGACTTCTCTCGAGTGCCAATCTCCGCATACGCCAACTC
CGTCATCGCAGTGGTATTCTACACCATCCTCGTGATATGCATCGAGGCCT
CGCTCGTCCTGCAGGTTCAGGTCATCTGCGCGAACCTCGGTCGTGTATAC
CGACAGATTCTCCTCTCACTGTCCATCGTGGTTGCACTGATCCCAGTCGG
ATTCCGTATGGCCATGATGGTCGAGAACGCCATTGCAATCATGGCAGCCG
AAAGCAGCATTCCTCTCATCTGGCTTCAAAGTGCAGAGAACATCACCGCC
ACAATCAGCATCTGCTTCTTCTGCGCCATCTTCGTTGCCAAGCTCGGATT
TGCCATTCGTCAGCGCCGCAGACTCGGCGTGCGAGATTTTGGCCCAATGA
AGGTCATCTTCATTATGGGTTGTCAGACTCTGGTCATTCCAGGTGTGCAA
CTCCCTCCCTCCCTCTCTTACCCTCACATATCTAACTGAACCTCGTCCAT
AGCCACCTTCTCAATCATCCACTACATCGCCGCCGTCCCGGCTCTATCCT
CCAACGTGGCCACCCTAGTCACCATCTCCCTTCCCCTCTCCTCTATCTGG
GCTGGTGTCGCCTTGACCAAAGTCTCCTCTGGCGCTGGCGCTGGCGCTGG
CTCTGGCACCGGATCTGGCTCGTCAGGCCGCAATCTATGGAACGTGCTCT
CCTTCCCTGTCTGGGATAGTAGAAACACTACCAGTACTACTACCTCTTCC
TCAACGCCAACTGTGAATCCAGTCTCAACCTGCTACGCGGACAATGGTTC
CTCTAAGCAGTGCAAGCAGCAGACTAACACTGAAGAAATTGGCATTACTG
TCGAACATGAGATCTCAGTGCAGAGCTTCAAGAGGGAAAAGGATATGGTT
TGAACTTCGAACTGAACTGTAGATCGTGCTCCGGTGGTGCGATTCGGAGG
GATGGTTCATGATTATTAAGGCTAGGGGGACCTCGTATGGTGGTCATTCA
TATCTCGG back to topCoding sequence (CDS) from alignment at ch1:1112560..1113867- >KJC3_000531-T1 ID=KJC3_000531-T1|Name=KJC3_000531-T1|organism=Aspergillus niger KJC3|type=CDS|length=2286bp|location=Sequence derived from alignment at ch1:1112560..1113867- (Aspergillus niger KJC3)
CCACCTTCTCAATCATCCACTACATCGCCGCCGTCCCGGCTCTATCCTCC
AACGTGGCCACCCTAGTCACCATCTCCCTTCCCCTCTCCTCTATCTGGGC
TGGTGTCGCCTTGACCAAAGTCTCCTCTGGCGCTGGCGCTGGCGCTGGCT
CTGGCACCGGATCTGGCTCGTCAGGCCGCAATCTATGGAACGTGCTCTCC
TTCCCTGTCTGGGATAGTAGAAACACTACCAGTACTACTACCTCTTCCTC
AACGCCAACTGTGAATCCAGTCTCAACCTGCTACGCGGACAATGGTTCCT
CTAAGCAGTGCAAGCAGCAGACTAACACTGAAGAAATTGGCATTACTGTC
GAACATGAGATCTCAGTGCAGAGCTTCAAGAGGGAAAAGGATATGGTTTG
AATGGCCTCAACTGATCAATTTGCCCAAAACGTCACCTTCCATACTGGCG
ATGGAACCCCCTTCGAGGTGAATGTGCAGGAAATTGACACATTCTTGCAG
TACTGTATTCAGATCTGCACCAACTATGGCGCCCAGCTCGGAGCTTCCAT
CGTGCTCTTCGTCATCCTCCTGCTCCTGACCAGACCCGAGAAGCGCAGCT
CCAGCGTCTTCATCCTCAATTGCGCTGCACTGCTCTCCAACGTCGGCCGT
CTCTTTTGCCAGATCTTGTATTTCACTACCGACTTCGTGAGAGTGTATGC
CTACTTCTCAGGAGACTTCTCTCGAGTGCCAATCTCCGCATACGCCAACT
CCGTCATCGCAGTGGTATTCTACACCATCCTCGTGATATGCATCGAGGCC
TCGCTCGTCCTGCAGGTTCAGGTCATCTGCGCGAACCTCGGTCGTGTATA
CCGACAGATTCTCCTCTCACTGTCCATCGTGGTTGCACTGATCCCAGTCG
GATTCCGTATGGCCATGATGGTCGAGAACGCCATTGCAATCATGGCAGCC
GAAAGCAGCATTCCTCTCATCTGGCTTCAAAGTGCAGAGAACATCACCGC
CACAATCAGCATCTGCTTCTTCTGCGCCATCTTCGTTGCCAAGCTCGGAT
TTGCCATTCGTCAGCGCCGCAGACTCGGCGTGCGAGATTTTGGCCCAATG
AAGGTCATCTTCATTATGGGTTGTCAGACTCTGGTCATTCCAGCCACCTT
CTCAATCATCCACTACATCGCCGCCGTCCCGGCTCTATCCTCCAACGTGG
CCACCCTAGTCACCATCTCCCTTCCCCTCTCCTCTATCTGGGCTGGTGTC
GCCTTGACCAAAGTCTCCTCTGGCGCTGGCGCTGGCGCTGGCTCTGGCAC
CGGATCTGGCTCGTCAGGCCGCAATCTATGGAACGTGCTCTCCTTCCCTG
TCTGGGATAGTAGAAACACTACCAGTACTACTACCTCTTCCTCAACGCCA
ACTGTGAATCCAGTCTCAACCTGCTACGCGGACAATGGTTCCTCTAAGCA
GTGCAAGCAGCAGACTAACACTGAAGAAATTGGCATTACTGTCGAACATG
AGATCTCAGTGCAGAGCTTCAAGAGGGAAAAGGATATGGTTTGAATGGCC
TCAACTGATCAATTTGCCCAAAACGTCACCTTCCATACTGGCGATGGAAC
CCCCTTCGAGGTGAATGTGCAGGAAATTGACACATTCTTGCAGTACTGTA
TTCAGATCTGCACCAACTATGGCGCCCAGCTCGGAGCTTCCATCGTGCTC
TTCGTCATCCTCCTGCTCCTGACCAGACCCGAGAAGCGCAGCTCCAGCGT
CTTCATCCTCAATTGCGCTGCACTGCTCTCCAACGTCGGCCGTCTCTTTT
GCCAGATCTTGTATTTCACTACCGACTTCGTGAGAGTGTATGCCTACTTC
TCAGGAGACTTCTCTCGAGTGCCAATCTCCGCATACGCCAACTCCGTCAT
CGCAGTGGTATTCTACACCATCCTCGTGATATGCATCGAGGCCTCGCTCG
TCCTGCAGGTTCAGGTCATCTGCGCGAACCTCGGTCGTGTATACCGACAG
ATTCTCCTCTCACTGTCCATCGTGGTTGCACTGATCCCAGTCGGATTCCG
TATGGCCATGATGGTCGAGAACGCCATTGCAATCATGGCAGCCGAAAGCA
GCATTCCTCTCATCTGGCTTCAAAGTGCAGAGAACATCACCGCCACAATC
AGCATCTGCTTCTTCTGCGCCATCTTCGTTGCCAAGCTCGGATTTGCCAT
TCGTCAGCGCCGCAGACTCGGCGTGCGAGATTTTGGCCCAATGAAGGTCA
TCTTCATTATGGGTTGTCAGACTCTGGTCATTCCAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016020 | membrane |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0007186 | G protein-coupled receptor signaling pathway |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004932 | mating-type factor pheromone receptor activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000531-T1.utr3p1 | KJC3_000531-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR027458 |
| DBxref | InterPro:IPR000366 |
| DBxref | PFAM:PF02116 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:1112560..1113867 - |
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