You are here

Home

KJC3_000538-T1, KJC3_000538-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_000538-T1
Unique NameKJC3_000538-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:1124021..1126937-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_000538-T1 ID=KJC3_000538-T1|Name=KJC3_000538-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2917bp|location=Sequence derived from alignment at ch1:1124021..1126937- (Aspergillus niger KJC3)
GTTCATTCTCTAGCACTCAGCCTACTGGAATCCGGTGGACACCCCTTTCG
CTCGCACCCAGTCCTCCCGCTGGCGCTGTCCAAGGGCCTCATCTACTCCA
GATGCGCTGAGCCATCGACTTTACCATGGGAACAGCTTCGCCTCCCTTCT
CCGTCTCTGGTGATATGACGGATATCATCAACCAAGATCCCCAACAATAA
TACTGTGTCTGAGCCCGCCATCTTCCTGGCCACTGCCTCTTCCTCCAGAG
GCAAATCTTCGCCTCTGCTCTCCCGTCTGGCCTGGCTTAGTTGGTTCCGG
CCCACTTGACTTCTGGTCAACTGTCCATCCACGGACTAGTCGACTGTCCT
ACCCTTCACCATGGGTACAGAATATACTACCTCCACGACCGCTGGCTCTA
CCCCTGTTTCGTGTCGGTCGACGGTTTCCGGGTGACACAATCGCCGTTAT
TGCGGAATGACTGATCCTGGGTCGGCAGGCTGATTAATTCTGTCGTCCGG
CTATTCGGTCCTCGCGGCTTTCCTGGGAAAAGTCCTGGTGCCAAAAATGT
CGCTGATTATTTAACTTCGGGAGAGGACCATTGTTACGATGGTCTTAGTT
TGAGCAAATTTTCCTTTCCCTTTCTTTTTACCTTTACCCTCCCTCATCTC
GCCATCTTTGTGCTCAAATCTATCCGGTTGTTCCCGTGACCTTCACAAAC
CTCACTTTTTTAACAACTACCAGACCTGGCGCTGCCATTTGTGCCTGGTC
CCCTCTTCTGAGCCTTGCTCATCTTGCTGTGACTTGGGTCAGATCAACCG
AAGCCTTGATTTCCTGACTGCATCGCAGTTGTGAGGCGTCCGTAACAGGC
CCGACACGACACCTACTTCTGTTTGTGTCCGATCTTGTCAGCTTTTACTT
GGTCGGTTGGGATCTCGCCTGCTTTGTCGCAGTGTGTGCGTCACACGACT
GTTGCTTCACTAGAGATTGTCCGGACTCACGTCCGGGCACTGGAACCTCT
CCTTCCTCCGAGCTTCCATATTATTCCGCTCGACGTCAAGTTCCGGACAA
TCAGCGAACTTTAAGCGACTGCCCTCACTGTGAGCCCACTCGCACGTGAG
CATCTAGTACATTAATACTAGGCGTCGTCGCTGGCTCTTTGGGCGTTCCC
ATTCACCCCGACTCGTATACAGTGTCGTTTAGGCTTCTCTGAGCCGTCTC
ATCATCATGCTTCCTCCGATTCCAGCATTGGCGGACTACGGGATCTCGGC
AGACCATGGCTTCCTCCCTCCAGAGCCACCCCTTGAGATCTTGCCAGACC
CCTATTATGCCAAGTGGGAGTGGATCGTTTCCAACCTGCAGGCACTTTTG
ACTAGCCGGAGGATCCGGGAGGTGGTCGATCATATGTCCACGCTGTCTAC
ATCATATCTTCAGTCGGAGAACGAGTGGCGCAGGGCCTACGTCGTACTGG
TATTTATGCTGCATGGGTATGTATGGGGGGGAAGCAAGCCGGCAGAGGTA
GGTGACACAAAGCTACGAAGTAGTTCCTGAGCTAATATTGGTGACCAGAA
AATCCCGCCTCAGCTGACCGTCCCACTATTCGACGTCTGCGAGCACCTGG
GTCTGCCGCCCGTGGCCACTTATGCAGGGGTGTGTCTGTGGAACTATAAG
CCTATTTTCCCGGAGGAATCGATCGATGATCTACGTAATCTCGACACCAT
CAACACATTTACAGGGTCATTGGATGAGAAGTGGTTTTACCTGGTCTCCG
TGGCCATTGAAGCTCGTGGAGCACCCTCGATCCCGCTGGTGCTGCAAGCA
ATTGCGGCGGCCCGGGCTGGAAACAGCCTGGTAGTCACCGAATGTCTGCA
GCGACTTGCTGAGGTGCTGGACGAGGTAGGGTCGCTGCTGGAGCGCATGT
ACGAGCACTGCGATCCGTATGTGTTCTACCACCGCATCCGGCCCTACCTG
GCTGGGAGCAAAAACATGGCTGATGCTGGCCTCCCGCATGGTCTATTATA
TGATTATGGAAACGGGCAGCCCGAGTATCGTCAGTATGGCGGCGGTAGCA
ACGCCCAGAGCTCACTGATCCAGTTCTTCGACATCGCACTGGGCATCGAG
CACCGTCCGACCGGGGAGACGCGTCCTAGCAGCACCCCGGTGAAGGACGA
GAAAGAGGGTGTTGTTGGGGCACCCCGTCACGGGTTCATTCAGGAGATGC
GTACATACATGCCTGCGGCGCACCGTCGTTTCTTGGAGCATGTTAATGCC
GTGGCCAACATCCGACAGTACGTGGAAGCACGACGCTCGGACAAGGCACT
GTGCATTGCATACGACGCATGTCTGTCGATGCTTCGGGCAATGCGCGACA
AGCACATCCAAATTGTATCCCGCTATATCATCATTCAGTCTCGGGATGCT
CGACCGAGTCGCCCAGCGCGCGCAACCAGTCCCAAGAGAGCCATTAACTT
GGCGACCGCCCGACACGGTGAGAAGCCGGACAGTAAGAAATTGCGGGGCA
CGGGTGGAACGGCCTTGATCCCGTTCCTGAAACAAGCACGGGACGAGACG
GGCGAGCCAGCGATCGATGCATGGGCCCGTCGGCTTTTGAGCACAGGACC
GTCGGAGTCTAGCTTCGCGGCGCTGAGCAAAGTGGACGAGGACCACGATG
GACATCTCCAGGTGGTGGGACTATCAGGAACATGGGCAGCGGATGACAGC
GAGGGTGGCATATGTCATTGGTAGCATTGCATGTAATAGATGCTGCATGG
TTTTGTTTTGTTTTGTTTAAGATTCACTAATGAGCGGGTCGGTGTTTTTC
TCTATCTAGCATTGAGACAGCCGATGACGATGACGAGGGGGGAAGATGAT
CGATGTACATAGAGCGATGAATACTTTTGATTATGACGAGAATGATGAAT
GCATGAGAGATTTAGAC
back to top

Coding sequence (CDS) from alignment at ch1:1124021..1126937-

>KJC3_000538-T1 ID=KJC3_000538-T1|Name=KJC3_000538-T1|organism=Aspergillus niger KJC3|type=CDS|length=2934bp|location=Sequence derived from alignment at ch1:1124021..1126937- (Aspergillus niger KJC3)
AAAATCCCGCCTCAGCTGACCGTCCCACTATTCGACGTCTGCGAGCACCT
GGGTCTGCCGCCCGTGGCCACTTATGCAGGGGTGTGTCTGTGGAACTATA
AGCCTATTTTCCCGGAGGAATCGATCGATGATCTACGTAATCTCGACACC
ATCAACACATTTACAGGGTCATTGGATGAGAAGTGGTTTTACCTGGTCTC
CGTGGCCATTGAAGCTCGTGGAGCACCCTCGATCCCGCTGGTGCTGCAAG
CAATTGCGGCGGCCCGGGCTGGAAACAGCCTGGTAGTCACCGAATGTCTG
CAGCGACTTGCTGAGGTGCTGGACGAGGTAGGGTCGCTGCTGGAGCGCAT
GTACGAGCACTGCGATCCGTATGTGTTCTACCACCGCATCCGGCCCTACC
TGGCTGGGAGCAAAAACATGGCTGATGCTGGCCTCCCGCATGGTCTATTA
TATGATTATGGAAACGGGCAGCCCGAGTATCGTCAGTATGGCGGCGGTAG
CAACGCCCAGAGCTCACTGATCCAGTTCTTCGACATCGCACTGGGCATCG
AGCACCGTCCGACCGGGGAGACGCGTCCTAGCAGCACCCCGGTGAAGGAC
GAGAAAGAGGGTGTTGTTGGGGCACCCCGTCACGGGTTCATTCAGGAGAT
GCGTACATACATGCCTGCGGCGCACCGTCGTTTCTTGGAGCATGTTAATG
CCGTGGCCAACATCCGACAGTACGTGGAAGCACGACGCTCGGACAAGGCA
CTGTGCATTGCATACGACGCATGTCTGTCGATGCTTCGGGCAATGCGCGA
CAAGCACATCCAAATTGTATCCCGCTATATCATCATTCAGTCTCGGGATG
CTCGACCGAGTCGCCCAGCGCGCGCAACCAGTCCCAAGAGAGCCATTAAC
TTGGCGACCGCCCGACACGGTGAGAAGCCGGACAGTAAGAAATTGCGGGG
CACGGGTGGAACGGCCTTGATCCCGTTCCTGAAACAAGCACGGGACGAGA
CGGGCGAGCCAGCGATCGATGCATGGGCCCGTCGGCTTTTGAGCACAGGA
CCGTCGGAGTCTAGCTTCGCGGCGCTGAGCAAAGTGGACGAGGACCACGA
TGGACATCTCCAGGTGGTGGGACTATCAGGAACATGGGCAGCGGATGACA
GCGAGGGTGGCATATGTCATTGGTAGATGCTTCCTCCGATTCCAGCATTG
GCGGACTACGGGATCTCGGCAGACCATGGCTTCCTCCCTCCAGAGCCACC
CCTTGAGATCTTGCCAGACCCCTATTATGCCAAGTGGGAGTGGATCGTTT
CCAACCTGCAGGCACTTTTGACTAGCCGGAGGATCCGGGAGGTGGTCGAT
CATATGTCCACGCTGTCTACATCATATCTTCAGTCGGAGAACGAGTGGCG
CAGGGCCTACGTCGTACTGGTATTTATGCTGCATGGGTATGTATGGGGGG
GAAGCAAGCCGGCAGAGAAAATCCCGCCTCAGCTGACCGTCCCACTATTC
GACGTCTGCGAGCACCTGGGTCTGCCGCCCGTGGCCACTTATGCAGGGGT
GTGTCTGTGGAACTATAAGCCTATTTTCCCGGAGGAATCGATCGATGATC
TACGTAATCTCGACACCATCAACACATTTACAGGGTCATTGGATGAGAAG
TGGTTTTACCTGGTCTCCGTGGCCATTGAAGCTCGTGGAGCACCCTCGAT
CCCGCTGGTGCTGCAAGCAATTGCGGCGGCCCGGGCTGGAAACAGCCTGG
TAGTCACCGAATGTCTGCAGCGACTTGCTGAGGTGCTGGACGAGGTAGGG
TCGCTGCTGGAGCGCATGTACGAGCACTGCGATCCGTATGTGTTCTACCA
CCGCATCCGGCCCTACCTGGCTGGGAGCAAAAACATGGCTGATGCTGGCC
TCCCGCATGGTCTATTATATGATTATGGAAACGGGCAGCCCGAGTATCGT
CAGTATGGCGGCGGTAGCAACGCCCAGAGCTCACTGATCCAGTTCTTCGA
CATCGCACTGGGCATCGAGCACCGTCCGACCGGGGAGACGCGTCCTAGCA
GCACCCCGGTGAAGGACGAGAAAGAGGGTGTTGTTGGGGCACCCCGTCAC
GGGTTCATTCAGGAGATGCGTACATACATGCCTGCGGCGCACCGTCGTTT
CTTGGAGCATGTTAATGCCGTGGCCAACATCCGACAGTACGTGGAAGCAC
GACGCTCGGACAAGGCACTGTGCATTGCATACGACGCATGTCTGTCGATG
CTTCGGGCAATGCGCGACAAGCACATCCAAATTGTATCCCGCTATATCAT
CATTCAGTCTCGGGATGCTCGACCGAGTCGCCCAGCGCGCGCAACCAGTC
CCAAGAGAGCCATTAACTTGGCGACCGCCCGACACGGTGAGAAGCCGGAC
AGTAAGAAATTGCGGGGCACGGGTGGAACGGCCTTGATCCCGTTCCTGAA
ACAAGCACGGGACGAGACGGGCGAGCCAGCGATCGATGCATGGGCCCGTC
GGCTTTTGAGCACAGGACCGTCGGAGTCTAGCTTCGCGGCGCTGAGCAAA
GTGGACGAGGACCACGATGGACATCTCCAGGTGGTGGGACTATCAGGAAC
ATGGGCAGCGGATGACAGCGAGGGTGGCATATGTCATTGGTAGATGCTTC
CTCCGATTCCAGCATTGGCGGACTACGGGATCTCGGCAGACCATGGCTTC
CTCCCTCCAGAGCCACCCCTTGAGATCTTGCCAGACCCCTATTATGCCAA
GTGGGAGTGGATCGTTTCCAACCTGCAGGCACTTTTGACTAGCCGGAGGA
TCCGGGAGGTGGTCGATCATATGTCCACGCTGTCTACATCATATCTTCAG
TCGGAGAACGAGTGGCGCAGGGCCTACGTCGTACTGGTATTTATGCTGCA
TGGGTATGTATGGGGGGGAAGCAAGCCGGCAGAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0019441tryptophan catabolic process to kynurenine
Vocabulary: Molecular Function
TermDefinition
GO:0046872metal ion binding
GO:0020037heme binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_000538KJC3_000538Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000538-T1KJC3_000538-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000538-T1.cdsKJC3_000538-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000538-T1.utr3p1KJC3_000538-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000538-T1.exon2KJC3_000538-T1.exon2Aspergillus niger KJC3exon
KJC3_000538-T1.exon1KJC3_000538-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000538-T1.utr5p1KJC3_000538-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR037217
DBxrefInterPro:IPR000898
DBxrefPFAM:PF01231
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:1124021..1126937 -
Powered by Drupal