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KJC3_000540-T1, KJC3_000540-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_000540-T1
Unique NameKJC3_000540-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:1129888..1132620+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_000540-T1 ID=KJC3_000540-T1|Name=KJC3_000540-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2733bp|location=Sequence derived from alignment at ch1:1129888..1132620+ (Aspergillus niger KJC3)
GAATCTTATGCTTGGCTCCCATAGCTCGATGCGAATGAATGTAAGAAGAC
ATATGTCCGGATGGAACAGACGAAAGATCCTCAAAGGGATGGCCAAATCC
AGGCACAACTATGGGGGCAGACATTCCACATTCATTGTGAGACAACCACT
TATTCCCGTTTATGTTGCTGGCCGACAACATCGTCATCGGTGAATTTCCC
CGGATTTCCCACACTGGGAAGACCAGCCTTATGTGCTGGCCACTGGCTGC
TGACGGCTGACAGCTGACAAGCTGAGAAAATAGCATCATGACCAAAACAA
CACTCGACCGATCACGGGGGCACAGGACCATTGATGTGGCAGAAACCGGC
GGAAAACGAGGGAAATTCTTGGGCGTCGAGGTCTGTGTTGACGATAGTGG
CTACTAGTGCAACCGGATACTCTGGTGCCTAACAAACACCGCAAAAAGCC
ATGGAGAATCTTTGCTGCTTCCGACACTCCGAGCCCCCCCGGCTGGCTGA
ATAATCGGCCCTACGATCCGACCCTGAGCCACATCTGGGATCGAAGTTCT
TCAGGGGTCTGGAGAGAGAAAGGAAAGATTCTGGAGCCTGGAGAGGGGCT
GATCTTATAGTTTTTTGCTCATTTACTATAATAGTCTCCAGGCTACTCCA
TATTCTATCTTTTCCCCTCTGCAGCCTTACCATCATTTGGCCAGGTACCC
AACTGAACCAACACCAAAACACACCACCAAGAAAGGGGGGAGCCACAACT
CAGCCACGGTGAGCAGGCAGAGCATTATGTCATAGCTCAGCCACGAATCA
TGGCAGTCTAACCGTCACCGGCAGCCAGTATTCTTTAGTCCTCACTAGTC
CGTTTGCCGCGAACAAAAGGCACTTCCTCCCCACTTCTGGCCTACCACGA
GATCCCTGGTTTGATCTGCTCTGGTTATTCACCTTTCTCGACGCTCCTAC
GCCTTCGCGACCCTCTCCCGACCCCTTTACACCACTTCCTACGACCACCA
CCTTCCTGCCCTTCTAAACCGAATCCTTCCGCGGGCGTTGGGCGACCTGC
GGCCAATCAGAGATGAGTTTGAAGGGCTTTCAGAAGAGCATTGTCCGCGC
TCCACAACAGTTCAAGGCCAAGTTCAATATTGGCGAGCATACCAAGGACC
CTGTCTACCTGGACGCTGAGCGACGATTTCAAGAACTCGAAAAGGAGACC
AAGAAGCTGCACGATGAGTCCAAGAAGTACTTCGATGCCATCAACGGTAC
ACACGGATCCCCCGTCTCGCAGCTACCCCTCCTTTTGCTGACTGGCGTAT
TTTTCCAGGCATGTTGAACCACCAGATTGGATTCTCCAAAGCGATGACGG
AACTCTACAAACCCATCTCCGGTCGTGCTTCCGACCCTAGCTCCTATACA
ATCGAGGGTAATCCGGAGGGTATCCGGGCATGTGAGGAATACGAGGCGAT
TGTGCGGGACCTCCAAGAATCGCTGGTGCCCGAGTTAGAGATGATCGACA
CCCGCGTCATCAGCCCTGCACAGCAGCTATTGGAGGTAATCAAGGTGATC
CGCAAAGTCGCGGTGAAGCGAGACCACAAGAAACTGGACTACGACCGCCA
CAAGAACTCGCTCAAGAAGCTTCAGGATAAAAAGGACAAGTCACTGAAGG
ATGAGAAGGCGCTTTACAAGGCAGAAAATGATGTGGAACAAGCGACTCAG
GACTACAACTACTACAACGACCTGCTCAAGGACGAGTTGCCCAAGCTGTT
CGCTCTGGAGGCTGAATTCATCCGTCCTCTGTTCCAGTCCTTCTACTACA
TGCAACTGAACGTCTTCTACACACTACACGAGCGAATGCAGGGCATCAAT
ATCGGTTACTTCGACCTGAATCTGGACATCGAGGAAGCGTTCGAGAACAA
GCGCGGAGACGTCAAGGAGCGCGCCGAGGAGCTCAGCATCGTCCACTTTA
AAGCCACGGGCGGGCGCAAACCCGGCTCGAAGCTTGGCCCCAAGGACAAA
CTGGCGCAAGAGGGCAAGAGTGGTTACGCCTCACGTCAGCGAGATCCCGA
TGTTGTCGAAAACCCCCCGCCGCCTTACTCTGCCACTGCAGGCAGCAGCT
TTACCGCCGCAGCGAAGAGCAAGCCCGCCCCTCCGCCGCCGAAACCGAAG
CCCGCTCGTTTCAGCGCTCCCGTCGAAACCGTCACGGCACTATATGACTA
TGAGGCCCAGGCGCACGGCGACCTCAGCTTCTCCGCCGGGGATGTCATCG
AGATCACACAGCGAACGAATAACCAGAATGAGTGGTGGAGCGGCCGTGTT
GACGGACGAGAGGGACAATTTCCTGGTGAGCATGACCGGCTGTCATTATC
AAAACATACCTCGCTAACTTGTATTCCAGCAAACTACGTCCAGCTGAACT
AGCATTATGCTATAGCTATATAATATCCTTATTCCTTGCTCGTCAATGTC
ATCACTGGTTATCTGGAGTTTCGGAGTGCCATTGTATCACTTGACAAGTA
GGAATCGCCAGTCGTTTTTGATTCTTGCCATAGAGCGTTGCATGATGATG
ACCGTTCGCTGTACATATTGATAATATCGAGGTTGTTTATTCCTACTGCA
TATTTGACCGCTACTTTGGGTTCTATAGAACTTCGGAAGTATTTCAATGC
GTTCCTATGCAACTTTTACTAGAAGCCGTGACATTCGATTCCGATGGGTT
TATCAGGTAGACAAACAGCAACCGTAGTAATAG
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Coding sequence (CDS) from alignment at ch1:1129888..1132620+

>KJC3_000540-T1 ID=KJC3_000540-T1|Name=KJC3_000540-T1|organism=Aspergillus niger KJC3|type=CDS|length=3672bp|location=Sequence derived from alignment at ch1:1129888..1132620+ (Aspergillus niger KJC3)
ATGAGTTTGAAGGGCTTTCAGAAGAGCATTGTCCGCGCTCCACAACAGTT
CAAGGCCAAGTTCAATATTGGCGAGCATACCAAGGACCCTGTCTACCTGG
ACGCTGAGCGACGATTTCAAGAACTCGAAAAGGAGACCAAGAAGCTGCAC
GATGAGTCCAAGAAGTACTTCGATGCCATCAACGGCATGTTGAACCACCA
GATTGGATTCTCCAAAGCGATGACGGAACTCTACAAACCCATCTCCGGTC
GTGCTTCCGACCCTAGCTCCTATACAATCGAGGGTAATCCGGAGGGTATC
CGGGCATGTGAGGAATACGAGGCGATTGTGCGGGACCTCCAAGAATCGCT
GGTGCCCGAGTTAGAGATGATCGACACCCGCGTCATCAGCCCTGCACAGC
AGCTATTGGAGGTAATCAAGGTGATCCGCAAAGTCGCGGTGAAGCGAGAC
CACAAGAAACTGGACTACGACCGCCACAAGAACTCGCTCAAGAAGCTTCA
GGATAAAAAGGACAAGTCACTGAAGGATGAGAAGGCGCTTTACAAGGCAG
AAAATGATGTGGAACAAGCGACTCAGGACTACAACTACTACAACGACCTG
CTCAAGGACGAGTTGCCCAAGCTGTTCGCTCTGGAGGCTGAATTCATCCG
TCCTCTGTTCCAGTCCTTCTACTACATGCAACTGAACGTCTTCTACACAC
TACACGAGCGAATGCAGGGCATCAATATCGGTTACTTCGACCTGAATCTG
GACATCGAGGAAGCGTTCGAGAACAAGCGCGGAGACGTCAAGGAGCGCGC
CGAGGAGCTCAGCATCGTCCACTTTAAAGCCACGGGCGGGCGCAAACCCG
GCTCGAAGCTTGGCCCCAAGGACAAACTGGCGCAAGAGGGCAAGAGTGGT
TACGCCTCACGTCAGCGAGATCCCGATGTTGTCGAAAACCCCCCGCCGCC
TTACTCTGCCACTGCAGGCAGCAGCTTTACCGCCGCAGCGAAGAGCAAGC
CCGCCCCTCCGCCGCCGAAACCGAAGCCCGCTCGTTTCAGCGCTCCCGTC
GAAACCGTCACGGCACTATATGACTATGAGGCCCAGGCGCACGGCGACCT
CAGCTTCTCCGCCGGGGATGTCATCGAGATCACACAGCGAACGAATAACC
AGAATGAGTGGTGGAGCGGCCGTGTTGACGGACGAGAGGGACAATTTCCT
GCAAACTACGTCCAGCTGAACTAGATGAGTTTGAAGGGCTTTCAGAAGAG
CATTGTCCGCGCTCCACAACAGTTCAAGGCCAAGTTCAATATTGGCGAGC
ATACCAAGGACCCTGTCTACCTGGACGCTGAGCGACGATTTCAAGAACTC
GAAAAGGAGACCAAGAAGCTGCACGATGAGTCCAAGAAGTACTTCGATGC
CATCAACGGCATGTTGAACCACCAGATTGGATTCTCCAAAGCGATGACGG
AACTCTACAAACCCATCTCCGGTCGTGCTTCCGACCCTAGCTCCTATACA
ATCGAGGGTAATCCGGAGGGTATCCGGGCATGTGAGGAATACGAGGCGAT
TGTGCGGGACCTCCAAGAATCGCTGGTGCCCGAGTTAGAGATGATCGACA
CCCGCGTCATCAGCCCTGCACAGCAGCTATTGGAGGTAATCAAGGTGATC
CGCAAAGTCGCGGTGAAGCGAGACCACAAGAAACTGGACTACGACCGCCA
CAAGAACTCGCTCAAGAAGCTTCAGGATAAAAAGGACAAGTCACTGAAGG
ATGAGAAGGCGCTTTACAAGGCAGAAAATGATGTGGAACAAGCGACTCAG
GACTACAACTACTACAACGACCTGCTCAAGGACGAGTTGCCCAAGCTGTT
CGCTCTGGAGGCTGAATTCATCCGTCCTCTGTTCCAGTCCTTCTACTACA
TGCAACTGAACGTCTTCTACACACTACACGAGCGAATGCAGGGCATCAAT
ATCGGTTACTTCGACCTGAATCTGGACATCGAGGAAGCGTTCGAGAACAA
GCGCGGAGACGTCAAGGAGCGCGCCGAGGAGCTCAGCATCGTCCACTTTA
AAGCCACGGGCGGGCGCAAACCCGGCTCGAAGCTTGGCCCCAAGGACAAA
CTGGCGCAAGAGGGCAAGAGTGGTTACGCCTCACGTCAGCGAGATCCCGA
TGTTGTCGAAAACCCCCCGCCGCCTTACTCTGCCACTGCAGGCAGCAGCT
TTACCGCCGCAGCGAAGAGCAAGCCCGCCCCTCCGCCGCCGAAACCGAAG
CCCGCTCGTTTCAGCGCTCCCGTCGAAACCGTCACGGCACTATATGACTA
TGAGGCCCAGGCGCACGGCGACCTCAGCTTCTCCGCCGGGGATGTCATCG
AGATCACACAGCGAACGAATAACCAGAATGAGTGGTGGAGCGGCCGTGTT
GACGGACGAGAGGGACAATTTCCTGCAAACTACGTCCAGCTGAACTAGAT
GAGTTTGAAGGGCTTTCAGAAGAGCATTGTCCGCGCTCCACAACAGTTCA
AGGCCAAGTTCAATATTGGCGAGCATACCAAGGACCCTGTCTACCTGGAC
GCTGAGCGACGATTTCAAGAACTCGAAAAGGAGACCAAGAAGCTGCACGA
TGAGTCCAAGAAGTACTTCGATGCCATCAACGGCATGTTGAACCACCAGA
TTGGATTCTCCAAAGCGATGACGGAACTCTACAAACCCATCTCCGGTCGT
GCTTCCGACCCTAGCTCCTATACAATCGAGGGTAATCCGGAGGGTATCCG
GGCATGTGAGGAATACGAGGCGATTGTGCGGGACCTCCAAGAATCGCTGG
TGCCCGAGTTAGAGATGATCGACACCCGCGTCATCAGCCCTGCACAGCAG
CTATTGGAGGTAATCAAGGTGATCCGCAAAGTCGCGGTGAAGCGAGACCA
CAAGAAACTGGACTACGACCGCCACAAGAACTCGCTCAAGAAGCTTCAGG
ATAAAAAGGACAAGTCACTGAAGGATGAGAAGGCGCTTTACAAGGCAGAA
AATGATGTGGAACAAGCGACTCAGGACTACAACTACTACAACGACCTGCT
CAAGGACGAGTTGCCCAAGCTGTTCGCTCTGGAGGCTGAATTCATCCGTC
CTCTGTTCCAGTCCTTCTACTACATGCAACTGAACGTCTTCTACACACTA
CACGAGCGAATGCAGGGCATCAATATCGGTTACTTCGACCTGAATCTGGA
CATCGAGGAAGCGTTCGAGAACAAGCGCGGAGACGTCAAGGAGCGCGCCG
AGGAGCTCAGCATCGTCCACTTTAAAGCCACGGGCGGGCGCAAACCCGGC
TCGAAGCTTGGCCCCAAGGACAAACTGGCGCAAGAGGGCAAGAGTGGTTA
CGCCTCACGTCAGCGAGATCCCGATGTTGTCGAAAACCCCCCGCCGCCTT
ACTCTGCCACTGCAGGCAGCAGCTTTACCGCCGCAGCGAAGAGCAAGCCC
GCCCCTCCGCCGCCGAAACCGAAGCCCGCTCGTTTCAGCGCTCCCGTCGA
AACCGTCACGGCACTATATGACTATGAGGCCCAGGCGCACGGCGACCTCA
GCTTCTCCGCCGGGGATGTCATCGAGATCACACAGCGAACGAATAACCAG
AATGAGTGGTGGAGCGGCCGTGTTGACGGACGAGAGGGACAATTTCCTGC
AAACTACGTCCAGCTGAACTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_000540KJC3_000540Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000540-T1KJC3_000540-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000540-T1.utr5p1KJC3_000540-T1.utr5p1Aspergillus niger KJC3five_prime_UTR
KJC3_000540-T1.utr5p2KJC3_000540-T1.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_000540-T1.utr5p3KJC3_000540-T1.utr5p3Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000540-T1.exon1KJC3_000540-T1.exon1Aspergillus niger KJC3exon
KJC3_000540-T1.exon2KJC3_000540-T1.exon2Aspergillus niger KJC3exon
KJC3_000540-T1.exon3KJC3_000540-T1.exon3Aspergillus niger KJC3exon
KJC3_000540-T1.exon4KJC3_000540-T1.exon4Aspergillus niger KJC3exon
KJC3_000540-T1.exon5KJC3_000540-T1.exon5Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000540-T1.cdsKJC3_000540-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000540-T1.utr3p1KJC3_000540-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09262PPU
DBxrefInterPro:IPR036028
DBxrefInterPro:IPR027267
DBxrefInterPro:IPR004148
DBxrefInterPro:IPR001452
DBxrefPFAM:PF14604
DBxrefPFAM:PF07653
DBxrefPFAM:PF00018
DBxrefPFAM:PF03114
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:1129888..1132620 +
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