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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:1151702..1154541- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000548-T1 ID=KJC3_000548-T1|Name=KJC3_000548-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2840bp|location=Sequence derived from alignment at ch1:1151702..1154541- (Aspergillus niger KJC3)
GTTTGTTGTCTAAAGTGCTGTTCCACTAAACCTTATTTTTTCAATGTGGA
TCAGTAACATCCTTACCAACACTCTGTATACTACCTGGCCGCCTCCGATC
AGCAGTGAATCCAAGATAACCAACATTCACGTTTGGGCATTAACATCTCA
CTGATCGAGTGACGTTGTGTTTAACCATACGTGGGGTCATCCGCGCCATT
ATTTCTGTTGATTCTCATATTTTCGCCCATACTGTGTTTCGTCGATGGTA
TAAGTGCGGTGTGGCAGTGCGCGCATCCTTTCCCTCCTCTCTGCTCCTCC
TCCTCCTCCGTTCTCCATATATGGTCTGCAGCCCTGCCATTCGCCATGGT
CACTTCTGGAATGGTCAGAAATTTGGATAGCATCCCTTATGATGTATTCT
ACCAAGTGGCTTCTACCCTCGACTGTCAAGACCTCATTCATCTTAGCCGC
GTTAACCGAACATTAAATCAGTTGGTGCAAAATGAGTCAATTGCGCGCAA
GACAATCCAAGTAAGTAGCACCTCTTTGTTTGTGAATTGCGTCTTATACT
GACTGTTTTAGAATGATCTACTGCACACGAAGGAAGGACAACAGGCACAC
CAGGCCAAGACTGGATATCGCAGGGCTCTCGGGCGCCTGTTCGACATCAA
GGAATCATTCGCAACAGCACAGCCGTATTCTGCTTCCATTCTGGCTTATG
CGAGCTCCTTCATCTACAGTGAGGGCTGTCTCAGCTACATCTACAACGAT
GAAATCCGCGTTCTAGACGTGCACGGTGCCAGCCAAGTTGAGCAGGTGCT
GAACATCCACAACGTCCTATCCCGGGCTATCCAAGGGTGCAATCCACAGA
CAGATACGTTCCAGGTCTGCCTCATGTACTACAGTAACTGGGTTCTGGCA
TTTACAGTGGAGTTTGTAGACAGACCCGAAGCCTGGCTTCTGGTAGTGGA
CATGCGACGCAAAGTGACCAACAAGAAATGTGGACGACTCCGTCTCCTGA
CTCGGCTTCAACACACACGACGATTATTCGTTCGACACAATGGCTCCTAT
CTGTACTACGGAACGCACACCGCCATGGGGGATCGTGGCTACTCACAATG
GGCAATCCATTGTGTGGATCTCAAAACAAGCCAGCACATGACTGAAAAGC
CAACCGTGCTGGAAAACTTCGCCGGCAGCGAGATTGGGCAGACCGTATGT
TTTGAAGTTCATCAGGACCACCTCTACGCAGTGTCAACGCTCGTTGACTT
TGAAGCGGAGGAGGTCGATTGGACCTCGTACTACGTGTGGCTCTGCCTTC
CCCCCAAGTCCAACGCCGCCAAACGATTCATCACGCCCAACCGTACTTGG
CGTCGTCAGCATCGTGAAGGCCCGATCAATGACACCTGGTCGGATCTCAC
GCTGCGCCAGGATGAGGCAACCAAGCGACTGATGATCCTCGAATGCCGCC
GGGAATGGCGCGATGGTAGGAGCGAAAATGCACGCACATATTACATGCAG
CCTTTACCGTCCCCAGCCGAAGCCACTCAGAATAAGCAGCAAGGCTTGCA
TTCCACGCCCAACGCAACGCCTGTCACCCTCCCTGACGAGCCTCTCACCA
GAACCCTCGACTCCACCAGCAAACCCAATTACGAACCCCCGCGTAAGCGT
CTACGCCGGCATTTCCACCAGGAATACGCACACGGCGGGGAACCGGCCCA
CCGACAAGACTACATTCTTGCCAAAACCAAATTCCGCAGCTACAACCTCT
CCGCTTCGACGTTTATCGATCTGGTCAACGACCCCTCTCCGGACACCCCC
GGCAGCTTCATCCCCCATGACCGACTCCGTGTGCGCATGGTATCACGCAA
ACGCAAATGTCCCATTGACGAGAACGGGGACGAAGGCGAACCGGGCCTGC
TCTTCCGCCCCGAACTCAGCGATGCAGATGGCCAGCCGATTGAGCACAGC
GAAGAACGCTACGCCTCACGCGGGGTCCGTCTGTGGCCCCCCGACAACGC
CCCGCGGGAATTGACTCAGCTCCTCTGCCCATCGAAGCGCTGTGGCCCCG
TTCAGGCAGCCGCCGACGAACGGTCCCTCGTGTACTCGGTTGATCAGGAA
GGCCTGGAAGGGACCGGACATCAGGCGATTGTGCTGATCAATTTCGACCC
GTCGCTACGCCTGCCCGGCTTACAGAGCATGAATCTCACCCGTGGTGGAG
CAGGCGCCCTGCCAGCGGACGAGTGTGATGCCCCAGTAGGCATGGAGCGA
CCAGCCATCGGAGATATCGGACGCGAACGGGTGGGCGTGCACACATTAAT
CGGCAGTCGAAGGGCGAACCAGCCGGTGCCATCTGTCCGTGAGGAACAGG
CCCTGTATCTTTCTATTCGACGGGGGTATTGGCTTCGGTAAGGGTGTGAT
GAGTTTGAGTCGAGTTGCACTGCCCTTGGCACCGGACGAGGCTGTGCAAG
GGTTTTGCCGGTGCGTGCCTAGTTAGCAGCAAGTGGGTTTTACTCTTGTC
TGAGACAGGGGTGGGAACACACACACACATACACACTACCAAACATACCA
TAATATCCTAGAATAGACGACTCAGATGATAATGAGAAGAATAAAAAAAA
TTACTATAAACCCACTAGTCTGGTGTGCGTGCGCAAATGTGATTATTCTT
CCTTGTTGTAGGTGGTTGGGGTCGTGTGCCGGGTGAGCTGATCGGATCGG
ATCGTCAGCTGTCAGCTTACTATCTTCTTACCTGACTTGTCTTATTCTGA
CAACTTGGCTGGACCCAGAGTCCTCGCATGCAATTGATTTCATTCGTACA
ATCGGCTATTTCTTGGCTCCAAGGAAAAAGAAAAGTCCCG back to topCoding sequence (CDS) from alignment at ch1:1151702..1154541- >KJC3_000548-T1 ID=KJC3_000548-T1|Name=KJC3_000548-T1|organism=Aspergillus niger KJC3|type=CDS|length=1440bp|location=Sequence derived from alignment at ch1:1151702..1154541- (Aspergillus niger KJC3)
ATGCGACGCAAAGTGACCAACAAGAAATGTGGACGACTCCGTCTCCTGAC
TCGGCTTCAACACACACGACGATTATTCGTTCGACACAATGGCTCCTATC
TGTACTACGGAACGCACACCGCCATGGGGGATCGTGGCTACTCACAATGG
GCAATCCATTGTGTGGATCTCAAAACAAGCCAGCACATGACTGAAAAGCC
AACCGTGCTGGAAAACTTCGCCGGCAGCGAGATTGGGCAGACCGTATGTT
TTGAAGTTCATCAGGACCACCTCTACGCAGTGTCAACGCTCGTTGACTTT
GAAGCGGAGGAGGTCGATTGGACCTCGTACTACGTGTGGCTCTGCCTTCC
CCCCAAGTCCAACGCCGCCAAACGATTCATCACGCCCAACCGTACTTGGC
GTCGTCAGCATCGTGAAGGCCCGATCAATGACACCTGGTCGGATCTCACG
CTGCGCCAGGATGAGGCAACCAAGCGACTGATGATCCTCGAATGCCGCCG
GGAATGGCGCGATGGTAGGAGCGAAAATGCACGCACATATTACATGCAGC
CTTTACCGTCCCCAGCCGAAGCCACTCAGAATAAGCAGCAAGGCTTGCAT
TCCACGCCCAACGCAACGCCTGTCACCCTCCCTGACGAGCCTCTCACCAG
AACCCTCGACTCCACCAGCAAACCCAATTACGAACCCCCGCGTAAGCGTC
TACGCCGGCATTTCCACCAGGAATACGCACACGGCGGGGAACCGGCCCAC
CGACAAGACTACATTCTTGCCAAAACCAAATTCCGCAGCTACAACCTCTC
CGCTTCGACGTTTATCGATCTGGTCAACGACCCCTCTCCGGACACCCCCG
GCAGCTTCATCCCCCATGACCGACTCCGTGTGCGCATGGTATCACGCAAA
CGCAAATGTCCCATTGACGAGAACGGGGACGAAGGCGAACCGGGCCTGCT
CTTCCGCCCCGAACTCAGCGATGCAGATGGCCAGCCGATTGAGCACAGCG
AAGAACGCTACGCCTCACGCGGGGTCCGTCTGTGGCCCCCCGACAACGCC
CCGCGGGAATTGACTCAGCTCCTCTGCCCATCGAAGCGCTGTGGCCCCGT
TCAGGCAGCCGCCGACGAACGGTCCCTCGTGTACTCGGTTGATCAGGAAG
GCCTGGAAGGGACCGGACATCAGGCGATTGTGCTGATCAATTTCGACCCG
TCGCTACGCCTGCCCGGCTTACAGAGCATGAATCTCACCCGTGGTGGAGC
AGGCGCCCTGCCAGCGGACGAGTGTGATGCCCCAGTAGGCATGGAGCGAC
CAGCCATCGGAGATATCGGACGCGAACGGGTGGGCGTGCACACATTAATC
GGCAGTCGAAGGGCGAACCAGCCGGTGCCATCTGTCCGTGAGGAACAGGC
CCTGTATCTTTCTATTCGACGGGGGTATTGGCTTCGGTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000548-T1.utr3p1 | KJC3_000548-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:1151702..1154541 - |
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