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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:1171939..1173806+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000554-T1 ID=KJC3_000554-T1|Name=KJC3_000554-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1868bp|location=Sequence derived from alignment at ch1:1171939..1173806+ (Aspergillus niger KJC3)
CTGAAAGTAGACAATCTTGTGCTTGTTTCAACTGTATAGAGCAGTCAGTC
ACATGGACCCCACCGAGCCGCCCCGCGCAAAAATAACTTCCAACGATTCC
ATCTCCGCCGCAAATCCACAGCGCAACATCGCCAACCAACATTGACAGTT
GATCGCGCCCCTTCCCTCTCATCATGCCGGTATGTTTCCTCAACCTCATG
CAATAGACCCGCATTAACCAATCACAGCTCATAGTATTGACCGGCTACCC
CTGCTCCGGCCTCACCTACCGCGCCCACCAACTCGCGACGCAGCTCGAAG
AGACCCAAACCGAGCTCTTCAACACCGGCGCTCTCCCCTCCTCGAAACCC
CGCTACAAGATCCACGTTGTGCCTACTCATGATCCCTCCCATCCGCGAAC
CGTTTACGACCATGCCCGCACAGAAAAGGAGACACGGGGCGTGGCATATG
CGCGGGCGAAGCGCGCGCTCGGCAAAGACAGCTTCGTGATTCTCGACGGA
ATGAACTACATCAAAGGATACCGTTATCAGCTGTGGTGTGAGGCGAAGGC
ACTGGGAACAACATGTTGCGTGGTATGCTATGCTATGCTCTCCTCCACCA
GCCCCTGAACAACCAGCAAGCAACACACGCACTAACACAATCACCAGGTC
CACGTCGGCACACCCATCGACCAATGCGTCGCAAACAACGAGGCTCGACT
CCGCCGTCAACAAGGCGCAGACAATAGTAACGAGGACACCTCCAATCCTA
ACGCCGAAGCGACACCATCCACCACCGAACCCACCTCCGACCAAGAAGAC
CCCTACCCACCGGAACTCCTGAACAACCTCATCTTCCGCTACGAAGAACC
CAGCATCCACAGCCGCTGGGACAAGCCCCTCTTCACCGTCCCCTGGACCG
ACGCATCCCCCCCAATCGCCGAAATCTGGACAGCCCTAACCGGCATCCCG
CACCCTTCAGCAACAACAACCCCCGAGCCCGCCTCCATATCAAACCTCAC
CTCAGCCCTCAATACCACCTCTCTCTCCTCAGCAGCAAGCACCACGACCA
CAACAGCTACCCCCTCCACATTCCGCACCAACCGTCCCAAAATCAAACCC
CACCAAGCAACCGCCCTCCCCGCCGCCACAGACTCCACAGCCCTCTACAA
CATGGAAAAGCGCACCTCAGCCATCGTCTCCGCCATCCGCACCTTCACGC
TCTCCAACCCCTCCGCTGAAGCCGCCCTCGCGCAGAGCCAAGACGGCAGC
AGCAGCAGCAGTGGACGGGGAATAACCATCCCCGTCCCGGAGGCGTCCAT
GCCCGTTTATGTTCCGGCGCATGTGGCGACGTCCGGCACGACGGATGAAT
TAGCCGGCGCGGGCGGCATCCTGGCGCTGCCGAGACTGCAGCGGTTGAGG
AGGCAGTGGATTGCGTTGAATCGGGCGTATGTGCAGGGGGCGCATGCGTC
GAGTAAGGGCGGGTTGAGTGCGGAGCAGGTTCCTGATGCGTTTGTGCGGT
TTTTGAATGCGGAGTTTGGGGCGGAGAGTGACTAGATAACATCCTATTTT
CTTAGTTTTGATTTTCACTGGTGTGGTTTGTTTGTGATGAGGGGTTGGGT
GTACACGCCCTCTTCTCTCGTCAAGGCGAGTCGTTGGTTAGGGAAGGGCT
TATATTCAGTGGTGTGATAGAGACGGGCGGGAAAAGTTTTGATAGAAGCG
TGTGTTTTGGAAGTATTTAGAGAGCGTTTTTTTCGTTATGGGTTACTTTA
GTGCCTGCTGCAAATAACGTCTAGCTACAGAGCCTACTACTAGGCTACTT
TTGACATACGTACTGTATGAATGATGATCGGCGAGTGCCTCTGTATTGGA
GAGCTTCTCGAATCTGGG back to topCoding sequence (CDS) from alignment at ch1:1171939..1173806+ >KJC3_000554-T1 ID=KJC3_000554-T1|Name=KJC3_000554-T1|organism=Aspergillus niger KJC3|type=CDS|length=3717bp|location=Sequence derived from alignment at ch1:1171939..1173806+ (Aspergillus niger KJC3)
ATGCCGCTCATAGTATTGACCGGCTACCCCTGCTCCGGCCTCACCTACCG
CGCCCACCAACTCGCGACGCAGCTCGAAGAGACCCAAACCGAGCTCTTCA
ACACCGGCGCTCTCCCCTCCTCGAAACCCCGCTACAAGATCCACGTTGTG
CCTACTCATGATCCCTCCCATCCGCGAACCGTTTACGACCATGCCCGCAC
AGAAAAGGAGACACGGGGCGTGGCATATGCGCGGGCGAAGCGCGCGCTCG
GCAAAGACAGCTTCGTGATTCTCGACGGAATGAACTACATCAAAGGATAC
CGTTATCAGCTGTGGTGTGAGGCGAAGGCACTGGGAACAACATGTTGCGT
GGTCCACGTCGGCACACCCATCGACCAATGCGTCGCAAACAACGAGGCTC
GACTCCGCCGTCAACAAGGCGCAGACAATAGTAACGAGGACACCTCCAAT
CCTAACGCCGAAGCGACACCATCCACCACCGAACCCACCTCCGACCAAGA
AGACCCCTACCCACCGGAACTCCTGAACAACCTCATCTTCCGCTACGAAG
AACCCAGCATCCACAGCCGCTGGGACAAGCCCCTCTTCACCGTCCCCTGG
ACCGACGCATCCCCCCCAATCGCCGAAATCTGGACAGCCCTAACCGGCAT
CCCGCACCCTTCAGCAACAACAACCCCCGAGCCCGCCTCCATATCAAACC
TCACCTCAGCCCTCAATACCACCTCTCTCTCCTCAGCAGCAAGCACCACG
ACCACAACAGCTACCCCCTCCACATTCCGCACCAACCGTCCCAAAATCAA
ACCCCACCAAGCAACCGCCCTCCCCGCCGCCACAGACTCCACAGCCCTCT
ACAACATGGAAAAGCGCACCTCAGCCATCGTCTCCGCCATCCGCACCTTC
ACGCTCTCCAACCCCTCCGCTGAAGCCGCCCTCGCGCAGAGCCAAGACGG
CAGCAGCAGCAGCAGTGGACGGGGAATAACCATCCCCGTCCCGGAGGCGT
CCATGCCCGTTTATGTTCCGGCGCATGTGGCGACGTCCGGCACGACGGAT
GAATTAGCCGGCGCGGGCGGCATCCTGGCGCTGCCGAGACTGCAGCGGTT
GAGGAGGCAGTGGATTGCGTTGAATCGGGCGTATGTGCAGGGGGCGCATG
CGTCGAGTAAGGGCGGGTTGAGTGCGGAGCAGGTTCCTGATGCGTTTGTG
CGGTTTTTGAATGCGGAGTTTGGGGCGGAGAGTGACTAGATGCCGCTCAT
AGTATTGACCGGCTACCCCTGCTCCGGCCTCACCTACCGCGCCCACCAAC
TCGCGACGCAGCTCGAAGAGACCCAAACCGAGCTCTTCAACACCGGCGCT
CTCCCCTCCTCGAAACCCCGCTACAAGATCCACGTTGTGCCTACTCATGA
TCCCTCCCATCCGCGAACCGTTTACGACCATGCCCGCACAGAAAAGGAGA
CACGGGGCGTGGCATATGCGCGGGCGAAGCGCGCGCTCGGCAAAGACAGC
TTCGTGATTCTCGACGGAATGAACTACATCAAAGGATACCGTTATCAGCT
GTGGTGTGAGGCGAAGGCACTGGGAACAACATGTTGCGTGGTCCACGTCG
GCACACCCATCGACCAATGCGTCGCAAACAACGAGGCTCGACTCCGCCGT
CAACAAGGCGCAGACAATAGTAACGAGGACACCTCCAATCCTAACGCCGA
AGCGACACCATCCACCACCGAACCCACCTCCGACCAAGAAGACCCCTACC
CACCGGAACTCCTGAACAACCTCATCTTCCGCTACGAAGAACCCAGCATC
CACAGCCGCTGGGACAAGCCCCTCTTCACCGTCCCCTGGACCGACGCATC
CCCCCCAATCGCCGAAATCTGGACAGCCCTAACCGGCATCCCGCACCCTT
CAGCAACAACAACCCCCGAGCCCGCCTCCATATCAAACCTCACCTCAGCC
CTCAATACCACCTCTCTCTCCTCAGCAGCAAGCACCACGACCACAACAGC
TACCCCCTCCACATTCCGCACCAACCGTCCCAAAATCAAACCCCACCAAG
CAACCGCCCTCCCCGCCGCCACAGACTCCACAGCCCTCTACAACATGGAA
AAGCGCACCTCAGCCATCGTCTCCGCCATCCGCACCTTCACGCTCTCCAA
CCCCTCCGCTGAAGCCGCCCTCGCGCAGAGCCAAGACGGCAGCAGCAGCA
GCAGTGGACGGGGAATAACCATCCCCGTCCCGGAGGCGTCCATGCCCGTT
TATGTTCCGGCGCATGTGGCGACGTCCGGCACGACGGATGAATTAGCCGG
CGCGGGCGGCATCCTGGCGCTGCCGAGACTGCAGCGGTTGAGGAGGCAGT
GGATTGCGTTGAATCGGGCGTATGTGCAGGGGGCGCATGCGTCGAGTAAG
GGCGGGTTGAGTGCGGAGCAGGTTCCTGATGCGTTTGTGCGGTTTTTGAA
TGCGGAGTTTGGGGCGGAGAGTGACTAGATGCCGCTCATAGTATTGACCG
GCTACCCCTGCTCCGGCCTCACCTACCGCGCCCACCAACTCGCGACGCAG
CTCGAAGAGACCCAAACCGAGCTCTTCAACACCGGCGCTCTCCCCTCCTC
GAAACCCCGCTACAAGATCCACGTTGTGCCTACTCATGATCCCTCCCATC
CGCGAACCGTTTACGACCATGCCCGCACAGAAAAGGAGACACGGGGCGTG
GCATATGCGCGGGCGAAGCGCGCGCTCGGCAAAGACAGCTTCGTGATTCT
CGACGGAATGAACTACATCAAAGGATACCGTTATCAGCTGTGGTGTGAGG
CGAAGGCACTGGGAACAACATGTTGCGTGGTCCACGTCGGCACACCCATC
GACCAATGCGTCGCAAACAACGAGGCTCGACTCCGCCGTCAACAAGGCGC
AGACAATAGTAACGAGGACACCTCCAATCCTAACGCCGAAGCGACACCAT
CCACCACCGAACCCACCTCCGACCAAGAAGACCCCTACCCACCGGAACTC
CTGAACAACCTCATCTTCCGCTACGAAGAACCCAGCATCCACAGCCGCTG
GGACAAGCCCCTCTTCACCGTCCCCTGGACCGACGCATCCCCCCCAATCG
CCGAAATCTGGACAGCCCTAACCGGCATCCCGCACCCTTCAGCAACAACA
ACCCCCGAGCCCGCCTCCATATCAAACCTCACCTCAGCCCTCAATACCAC
CTCTCTCTCCTCAGCAGCAAGCACCACGACCACAACAGCTACCCCCTCCA
CATTCCGCACCAACCGTCCCAAAATCAAACCCCACCAAGCAACCGCCCTC
CCCGCCGCCACAGACTCCACAGCCCTCTACAACATGGAAAAGCGCACCTC
AGCCATCGTCTCCGCCATCCGCACCTTCACGCTCTCCAACCCCTCCGCTG
AAGCCGCCCTCGCGCAGAGCCAAGACGGCAGCAGCAGCAGCAGTGGACGG
GGAATAACCATCCCCGTCCCGGAGGCGTCCATGCCCGTTTATGTTCCGGC
GCATGTGGCGACGTCCGGCACGACGGATGAATTAGCCGGCGCGGGCGGCA
TCCTGGCGCTGCCGAGACTGCAGCGGTTGAGGAGGCAGTGGATTGCGTTG
AATCGGGCGTATGTGCAGGGGGCGCATGCGTCGAGTAAGGGCGGGTTGAG
TGCGGAGCAGGTTCCTGATGCGTTTGTGCGGTTTTTGAATGCGGAGTTTG
GGGCGGAGAGTGACTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000554-T1.utr5p1 | KJC3_000554-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000554-T1.utr3p1 | KJC3_000554-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09263L9T |
| DBxref | InterPro:IPR027417 |
| DBxref | InterPro:IPR013641 |
| DBxref | PFAM:PF08433 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:1171939..1173806 + |
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