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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:1192954..1196382+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000561-T1 ID=KJC3_000561-T1|Name=KJC3_000561-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3429bp|location=Sequence derived from alignment at ch1:1192954..1196382+ (Aspergillus niger KJC3)
AAAATAGAATAGAATAAATACGAAAATAAGATGAAATAGACAAACTTTCA
ATCCATTTTGGGTAGGATTTCCCCAGGCCCTCTCCTTCTCCCTCTCTCTC
TCTCTCTGTGTGTCCTCTTCTCTGTTCCTTTTCCTTTCCTCCTTTTGCCG
CGTCGACGATCGCCTCTTCGGCCCTTCTTTTGCCTCTTTTCAGCAATTCG
AGTGGTTCCGTCCATCCATCTCCCCAAGGGGCTCTGGATCCTCATTGGCA
CCCGTCATTCCCTCGCTCTTCTCATCTTCCTCTTTTCGTACCCTCTTTTT
TCCCGTGCGTTGCTCCTAAACTTAACTCTACTGACTGACTGCTTAACTAC
TTTGTACTAAGTTACTAAAGTTACTCCTCCCGTACGGTACCAAACCCACC
CTCGGCTTTCCCTCTTGTCTCCCTCTTTCCCTCCGCTCCATCGTCTCTCC
CTGTCCCTCTCCCTCTCCCTCACTCAACTAATTTACTCTCTCTTCTTCTT
CTTCTTCTTCTCTCCTTGTTACTTCACTCCCCTCTTTCTCTCTTTTTACA
AATCATCATCTTCCTTCCCCACCCCACCTCTCCCTCGTTCACATACATTC
TAATCTCACCCGGAGAAAATTTCAAGCCTTTCCTTCTTCTTTTCTCCCCC
CCCCCAAGTGGAATTAAGCAATCTTAAATTGAAAGACCCGTCCCGGTCCA
ACTTGCCGCTACCGAATAAACTAAACGTTTCCCCCCTCTCCCTCCAATTA
TTTCTCCTTGCCCCTGACCGACATCCGCGGCATCGCCGTTTCAGCATACG
CCTAAGCTCTCTCTAGTCTGGCGTCTGCACTCACAGTCTCGGCCTCCTGA
TCATCCACTTACTCCTGTCTTTTTATGCTGTCTCTCTCTGTTCCCCAATC
ATCTCTTCTGACCTGCTCCCATCTCGACATCGCATTGCGTGGACTCGCAA
CATGTATGCCTCTCAACAGCCTGCTACCTACGCCTACCCACCTGGCGTGA
CGCTGGGCCCCTCAGGTGCGTCATCTTGCTGATTCTTGTTTTGTCCCCTG
GTCCTGTCCTCCTTCCAGGATTCTTCGTTATCTCCCAGCCGTTTCACCTC
TAGCGGGGCTTCCCCTTGGTCAGAGTGTTATCTGTCCTGTGCCGCCTGCT
TTTCTATTTCAGAACCGTGCTTCCCCAAAGTAAAAGTACCAAAAAACTAA
CCTTGATCTGTCTGCTGCTCGTCTACAGGCTCACCTGTCCAACAAGCTTT
CGGTCCAGCCCCCGTCAATCTGGGCTCCAACAATCCCTTTCGGAATCGTG
CTCTGTCGCCTTCCGCCAGCTCTTTCGCATCCGCCAGTGGCCAATCTGAA
CGCCGAGTCTCTACGAATCCTTTTGACGACGACACGCTTTCGCCGCAGTC
GGCCCCCGTGATAGGGTCAACCATGGTCTCCCCAGTCGAGAGACAAGACA
TGACGTCCAACACTCGTGAACTCTTTGTATGCTCATTTCGCACCCCTGAC
CACTGTCGCTCATCGGGACTGACCCAAAACTACGTGAAATAGGAGAACCT
TTCCGTAAACCCTGCTCCCCAGAACACTGGTTACAGACAAGCTCCCCCGC
GCCCGGACAAGCCCGCGCCCAACGGATACCCGACGAACCGTGGACCTCCG
CCGAGGGAACGCCCAGACCGTCGCGACAAAGACCCCTTAGACATCTTTGC
CGATCCCCCGAAGACGAGCAGTGGCGGAAGATCGGGGTACAGAGAGCGGA
GGCCTCGCCGGAACTCAGAGTCATCCATCATGGAACGAACCCCCAAGCTT
GTGGATACTGAGGACGAGAGACGGCGTCGCGAGCGACGACGCCGGGAGCG
GGAGGCTCGCCATAAAGATGGAAAGGACAGCAAGGAGTCAAAGGATGGAA
AGCCTCGTCCGTCTAAAAAGTCCAACTACCACATGGACATTATCGATAAA
CTGGACGTGACCAGTATTTATGGCACTGGAAGTGAGTTGGAGCCCATTGC
TATCTGGCAGAAGCACTTGCTAACGGGAGTTGTCTGGTATAGTGTTCCAT
CACGACGGGCCGTTCGATGCCTGCAATCCTAACCGTAACCGCAAGGGCTT
GCGTACGGCACCCATGCAGGCGTTCCCCAAGGACTCTGCCAACATGGCCC
TTGGAGGCGCAGGGCCAGTCAACTCCAACATTGATCTGAACCTGTTCCAC
GGGACCATGGACGAAGGCTACAATGACTATTCTACCAGCGCCGCGGTGGA
CCCGCGTAACAACAAGAGCGAGACCGCGAACTTTGATCCAACCACTCGCA
TCGAACCTGTCCATGGAGCGGAGAGCATGGGTCTGGGAACTAGCACGTTC
CTGGATGGTGCCCCGGCTAGCCGGGCAGACATTCAGCGCCGTGGAAGTGG
GAACGAGAACGGTGGAGCTGGTCCCAGCGGGGGAGGCTTGCAGCGCAAGA
AGAGTTTGGCCCAAAGACTCCGGGGAATGAACAAGCCCTCAAATCCCCGA
GTGGTCTCTCCCGAGTCCTCATACACCCCGGGTGTGTCTACCGGCTCTAG
TCACATCGGAACCATCCGCGCCAATGAGAAGAATCCCTTCTTCCAGGATT
ATGATGATGCTTGGGACAAGAAGGGAGCCCAGATCAACATGTCTGAAGAA
TCACGTGGTACCGTAGGTACACGAGCCCGTTCTTCCAGCAGCCCCAAGCA
GAATACCGGGTTGGAGCGGAGGTTTACCAACGAACGGACCAACACTGGAC
TCGATGAGGGCAAGCCCAGCGGCGGCGGGTTTATCAACCGCATGAAGAGT
TTGAGAAAGCCCCGCCCTGAGCGGCGCATCAGCAACGACTGAGCGACTTG
AGTGATTTTGATCAACGGTCATTTCCAACTCCGTTGCTTGTGTTTGACGC
AGATGACGAGGGAAGTGCGGAGAGGTGGAGAACGCTCTGGAAGCATCCAT
CTTGCACTCCCTTTAGTGTCTATTTCGTATAGAAGATAGGCAGAATGAGG
CATATGATGAGATAAAGCATCGTGAATCGCAGGCTAGCGTAAAACGACAT
ATGATAATAATATCGTCTGCAGCGTTACCTTGGGATTTCCGACGCATTAC
TCAACGCTCACCCAGAGCGACTGTTTTAGCGCGCTCTAAAGCGACGTACT
CGACTCCAATACAAACGGTTTGGCGAGGCGGTGATGGGAGTGGTTGGTGT
TTCTTTGACTGGTAAACCACACGGTGTACGGGACGCGAAAGGACAAGGCG
TTGATGTGAGCATTACTCTTTGTGTGCATGGGAATCGGACCTGTGTTGGG
ACCGACTGGGCTTTGCTGTTTCGTGCTTCACTTGTTTGATGGGGCTGTTT
GAAGGCGATGTGTCTTTCAGCTGAATACATACCTTATTATGCTTGTACTG
GCCCTCTTGCATCTATACTATCACTCTAG back to topCoding sequence (CDS) from alignment at ch1:1192954..1196382+ >KJC3_000561-T1 ID=KJC3_000561-T1|Name=KJC3_000561-T1|organism=Aspergillus niger KJC3|type=CDS|length=6204bp|location=Sequence derived from alignment at ch1:1192954..1196382+ (Aspergillus niger KJC3)
ATGTATGCCTCTCAACAGCCTGCTACCTACGCCTACCCACCTGGCGTGAC
GCTGGGCCCCTCAGGCTCACCTGTCCAACAAGCTTTCGGTCCAGCCCCCG
TCAATCTGGGCTCCAACAATCCCTTTCGGAATCGTGCTCTGTCGCCTTCC
GCCAGCTCTTTCGCATCCGCCAGTGGCCAATCTGAACGCCGAGTCTCTAC
GAATCCTTTTGACGACGACACGCTTTCGCCGCAGTCGGCCCCCGTGATAG
GGTCAACCATGGTCTCCCCAGTCGAGAGACAAGACATGACGTCCAACACT
CGTGAACTCTTTGAGAACCTTTCCGTAAACCCTGCTCCCCAGAACACTGG
TTACAGACAAGCTCCCCCGCGCCCGGACAAGCCCGCGCCCAACGGATACC
CGACGAACCGTGGACCTCCGCCGAGGGAACGCCCAGACCGTCGCGACAAA
GACCCCTTAGACATCTTTGCCGATCCCCCGAAGACGAGCAGTGGCGGAAG
ATCGGGGTACAGAGAGCGGAGGCCTCGCCGGAACTCAGAGTCATCCATCA
TGGAACGAACCCCCAAGCTTGTGGATACTGAGGACGAGAGACGGCGTCGC
GAGCGACGACGCCGGGAGCGGGAGGCTCGCCATAAAGATGGAAAGGACAG
CAAGGAGTCAAAGGATGGAAAGCCTCGTCCGTCTAAAAAGTCCAACTACC
ACATGGACATTATCGATAAACTGGACGTGACCAGTATTTATGGCACTGGA
ATGTTCCATCACGACGGGCCGTTCGATGCCTGCAATCCTAACCGTAACCG
CAAGGGCTTGCGTACGGCACCCATGCAGGCGTTCCCCAAGGACTCTGCCA
ACATGGCCCTTGGAGGCGCAGGGCCAGTCAACTCCAACATTGATCTGAAC
CTGTTCCACGGGACCATGGACGAAGGCTACAATGACTATTCTACCAGCGC
CGCGGTGGACCCGCGTAACAACAAGAGCGAGACCGCGAACTTTGATCCAA
CCACTCGCATCGAACCTGTCCATGGAGCGGAGAGCATGGGTCTGGGAACT
AGCACGTTCCTGGATGGTGCCCCGGCTAGCCGGGCAGACATTCAGCGCCG
TGGAAGTGGGAACGAGAACGGTGGAGCTGGTCCCAGCGGGGGAGGCTTGC
AGCGCAAGAAGAGTTTGGCCCAAAGACTCCGGGGAATGAACAAGCCCTCA
AATCCCCGAGTGGTCTCTCCCGAGTCCTCATACACCCCGGGTGTGTCTAC
CGGCTCTAGTCACATCGGAACCATCCGCGCCAATGAGAAGAATCCCTTCT
TCCAGGATTATGATGATGCTTGGGACAAGAAGGGAGCCCAGATCAACATG
TCTGAAGAATCACGTGGTACCGTAGGTACACGAGCCCGTTCTTCCAGCAG
CCCCAAGCAGAATACCGGGTTGGAGCGGAGGTTTACCAACGAACGGACCA
ACACTGGACTCGATGAGGGCAAGCCCAGCGGCGGCGGGTTTATCAACCGC
ATGAAGAGTTTGAGAAAGCCCCGCCCTGAGCGGCGCATCAGCAACGACTG
AATGTATGCCTCTCAACAGCCTGCTACCTACGCCTACCCACCTGGCGTGA
CGCTGGGCCCCTCAGGCTCACCTGTCCAACAAGCTTTCGGTCCAGCCCCC
GTCAATCTGGGCTCCAACAATCCCTTTCGGAATCGTGCTCTGTCGCCTTC
CGCCAGCTCTTTCGCATCCGCCAGTGGCCAATCTGAACGCCGAGTCTCTA
CGAATCCTTTTGACGACGACACGCTTTCGCCGCAGTCGGCCCCCGTGATA
GGGTCAACCATGGTCTCCCCAGTCGAGAGACAAGACATGACGTCCAACAC
TCGTGAACTCTTTGAGAACCTTTCCGTAAACCCTGCTCCCCAGAACACTG
GTTACAGACAAGCTCCCCCGCGCCCGGACAAGCCCGCGCCCAACGGATAC
CCGACGAACCGTGGACCTCCGCCGAGGGAACGCCCAGACCGTCGCGACAA
AGACCCCTTAGACATCTTTGCCGATCCCCCGAAGACGAGCAGTGGCGGAA
GATCGGGGTACAGAGAGCGGAGGCCTCGCCGGAACTCAGAGTCATCCATC
ATGGAACGAACCCCCAAGCTTGTGGATACTGAGGACGAGAGACGGCGTCG
CGAGCGACGACGCCGGGAGCGGGAGGCTCGCCATAAAGATGGAAAGGACA
GCAAGGAGTCAAAGGATGGAAAGCCTCGTCCGTCTAAAAAGTCCAACTAC
CACATGGACATTATCGATAAACTGGACGTGACCAGTATTTATGGCACTGG
AATGTTCCATCACGACGGGCCGTTCGATGCCTGCAATCCTAACCGTAACC
GCAAGGGCTTGCGTACGGCACCCATGCAGGCGTTCCCCAAGGACTCTGCC
AACATGGCCCTTGGAGGCGCAGGGCCAGTCAACTCCAACATTGATCTGAA
CCTGTTCCACGGGACCATGGACGAAGGCTACAATGACTATTCTACCAGCG
CCGCGGTGGACCCGCGTAACAACAAGAGCGAGACCGCGAACTTTGATCCA
ACCACTCGCATCGAACCTGTCCATGGAGCGGAGAGCATGGGTCTGGGAAC
TAGCACGTTCCTGGATGGTGCCCCGGCTAGCCGGGCAGACATTCAGCGCC
GTGGAAGTGGGAACGAGAACGGTGGAGCTGGTCCCAGCGGGGGAGGCTTG
CAGCGCAAGAAGAGTTTGGCCCAAAGACTCCGGGGAATGAACAAGCCCTC
AAATCCCCGAGTGGTCTCTCCCGAGTCCTCATACACCCCGGGTGTGTCTA
CCGGCTCTAGTCACATCGGAACCATCCGCGCCAATGAGAAGAATCCCTTC
TTCCAGGATTATGATGATGCTTGGGACAAGAAGGGAGCCCAGATCAACAT
GTCTGAAGAATCACGTGGTACCGTAGGTACACGAGCCCGTTCTTCCAGCA
GCCCCAAGCAGAATACCGGGTTGGAGCGGAGGTTTACCAACGAACGGACC
AACACTGGACTCGATGAGGGCAAGCCCAGCGGCGGCGGGTTTATCAACCG
CATGAAGAGTTTGAGAAAGCCCCGCCCTGAGCGGCGCATCAGCAACGACT
GAATGTATGCCTCTCAACAGCCTGCTACCTACGCCTACCCACCTGGCGTG
ACGCTGGGCCCCTCAGGCTCACCTGTCCAACAAGCTTTCGGTCCAGCCCC
CGTCAATCTGGGCTCCAACAATCCCTTTCGGAATCGTGCTCTGTCGCCTT
CCGCCAGCTCTTTCGCATCCGCCAGTGGCCAATCTGAACGCCGAGTCTCT
ACGAATCCTTTTGACGACGACACGCTTTCGCCGCAGTCGGCCCCCGTGAT
AGGGTCAACCATGGTCTCCCCAGTCGAGAGACAAGACATGACGTCCAACA
CTCGTGAACTCTTTGAGAACCTTTCCGTAAACCCTGCTCCCCAGAACACT
GGTTACAGACAAGCTCCCCCGCGCCCGGACAAGCCCGCGCCCAACGGATA
CCCGACGAACCGTGGACCTCCGCCGAGGGAACGCCCAGACCGTCGCGACA
AAGACCCCTTAGACATCTTTGCCGATCCCCCGAAGACGAGCAGTGGCGGA
AGATCGGGGTACAGAGAGCGGAGGCCTCGCCGGAACTCAGAGTCATCCAT
CATGGAACGAACCCCCAAGCTTGTGGATACTGAGGACGAGAGACGGCGTC
GCGAGCGACGACGCCGGGAGCGGGAGGCTCGCCATAAAGATGGAAAGGAC
AGCAAGGAGTCAAAGGATGGAAAGCCTCGTCCGTCTAAAAAGTCCAACTA
CCACATGGACATTATCGATAAACTGGACGTGACCAGTATTTATGGCACTG
GAATGTTCCATCACGACGGGCCGTTCGATGCCTGCAATCCTAACCGTAAC
CGCAAGGGCTTGCGTACGGCACCCATGCAGGCGTTCCCCAAGGACTCTGC
CAACATGGCCCTTGGAGGCGCAGGGCCAGTCAACTCCAACATTGATCTGA
ACCTGTTCCACGGGACCATGGACGAAGGCTACAATGACTATTCTACCAGC
GCCGCGGTGGACCCGCGTAACAACAAGAGCGAGACCGCGAACTTTGATCC
AACCACTCGCATCGAACCTGTCCATGGAGCGGAGAGCATGGGTCTGGGAA
CTAGCACGTTCCTGGATGGTGCCCCGGCTAGCCGGGCAGACATTCAGCGC
CGTGGAAGTGGGAACGAGAACGGTGGAGCTGGTCCCAGCGGGGGAGGCTT
GCAGCGCAAGAAGAGTTTGGCCCAAAGACTCCGGGGAATGAACAAGCCCT
CAAATCCCCGAGTGGTCTCTCCCGAGTCCTCATACACCCCGGGTGTGTCT
ACCGGCTCTAGTCACATCGGAACCATCCGCGCCAATGAGAAGAATCCCTT
CTTCCAGGATTATGATGATGCTTGGGACAAGAAGGGAGCCCAGATCAACA
TGTCTGAAGAATCACGTGGTACCGTAGGTACACGAGCCCGTTCTTCCAGC
AGCCCCAAGCAGAATACCGGGTTGGAGCGGAGGTTTACCAACGAACGGAC
CAACACTGGACTCGATGAGGGCAAGCCCAGCGGCGGCGGGTTTATCAACC
GCATGAAGAGTTTGAGAAAGCCCCGCCCTGAGCGGCGCATCAGCAACGAC
TGAATGTATGCCTCTCAACAGCCTGCTACCTACGCCTACCCACCTGGCGT
GACGCTGGGCCCCTCAGGCTCACCTGTCCAACAAGCTTTCGGTCCAGCCC
CCGTCAATCTGGGCTCCAACAATCCCTTTCGGAATCGTGCTCTGTCGCCT
TCCGCCAGCTCTTTCGCATCCGCCAGTGGCCAATCTGAACGCCGAGTCTC
TACGAATCCTTTTGACGACGACACGCTTTCGCCGCAGTCGGCCCCCGTGA
TAGGGTCAACCATGGTCTCCCCAGTCGAGAGACAAGACATGACGTCCAAC
ACTCGTGAACTCTTTGAGAACCTTTCCGTAAACCCTGCTCCCCAGAACAC
TGGTTACAGACAAGCTCCCCCGCGCCCGGACAAGCCCGCGCCCAACGGAT
ACCCGACGAACCGTGGACCTCCGCCGAGGGAACGCCCAGACCGTCGCGAC
AAAGACCCCTTAGACATCTTTGCCGATCCCCCGAAGACGAGCAGTGGCGG
AAGATCGGGGTACAGAGAGCGGAGGCCTCGCCGGAACTCAGAGTCATCCA
TCATGGAACGAACCCCCAAGCTTGTGGATACTGAGGACGAGAGACGGCGT
CGCGAGCGACGACGCCGGGAGCGGGAGGCTCGCCATAAAGATGGAAAGGA
CAGCAAGGAGTCAAAGGATGGAAAGCCTCGTCCGTCTAAAAAGTCCAACT
ACCACATGGACATTATCGATAAACTGGACGTGACCAGTATTTATGGCACT
GGAATGTTCCATCACGACGGGCCGTTCGATGCCTGCAATCCTAACCGTAA
CCGCAAGGGCTTGCGTACGGCACCCATGCAGGCGTTCCCCAAGGACTCTG
CCAACATGGCCCTTGGAGGCGCAGGGCCAGTCAACTCCAACATTGATCTG
AACCTGTTCCACGGGACCATGGACGAAGGCTACAATGACTATTCTACCAG
CGCCGCGGTGGACCCGCGTAACAACAAGAGCGAGACCGCGAACTTTGATC
CAACCACTCGCATCGAACCTGTCCATGGAGCGGAGAGCATGGGTCTGGGA
ACTAGCACGTTCCTGGATGGTGCCCCGGCTAGCCGGGCAGACATTCAGCG
CCGTGGAAGTGGGAACGAGAACGGTGGAGCTGGTCCCAGCGGGGGAGGCT
TGCAGCGCAAGAAGAGTTTGGCCCAAAGACTCCGGGGAATGAACAAGCCC
TCAAATCCCCGAGTGGTCTCTCCCGAGTCCTCATACACCCCGGGTGTGTC
TACCGGCTCTAGTCACATCGGAACCATCCGCGCCAATGAGAAGAATCCCT
TCTTCCAGGATTATGATGATGCTTGGGACAAGAAGGGAGCCCAGATCAAC
ATGTCTGAAGAATCACGTGGTACCGTAGGTACACGAGCCCGTTCTTCCAG
CAGCCCCAAGCAGAATACCGGGTTGGAGCGGAGGTTTACCAACGAACGGA
CCAACACTGGACTCGATGAGGGCAAGCCCAGCGGCGGCGGGTTTATCAAC
CGCATGAAGAGTTTGAGAAAGCCCCGCCCTGAGCGGCGCATCAGCAACGA
CTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000561-T1.utr3p1 | KJC3_000561-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR013226 |
| DBxref | PFAM:PF08316 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:1192954..1196382 + |
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