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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:1201192..1204628+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000563-T1 ID=KJC3_000563-T1|Name=KJC3_000563-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3437bp|location=Sequence derived from alignment at ch1:1201192..1204628+ (Aspergillus niger KJC3)
CACCTATCGTCCCTTCTTCAAAACCCCTATCAAGTTCTTTAGATAATATT
CACATCTCCTGTTGTTTCTGTATCGCGTGACGGATATCCAACAGACATGG
CCAACACCGAGTCGGGCGACTCAATCCTCAATGCCGGACAGGCACTGAGC
GGACAGACTACCGCAGGGCGCCGCGAGAGCTTCAGCTCTCAAAACTCGCA
GACGGCGAAGGAGTGAGTGCTCATTCATCTGGAACTCGCATGCACTGGTA
TTCCATTGCAAATTTTGTTGCACAGGCAACTGACACCCATAGATTCATCG
AATCCCAGATTCGACTTGAAGCCGATGCGCGTGAAGTCCTTCCATATGTA
AGCTTACCTTTCTACTTATCGAAGAGAGAAAAGTGAAGAATCAGAAACAC
TAACACCTACGCAAGTCATTCGACACTTGTACACAAGACTTAGGTCCCCT
TCGCCAATCTCTTTTTGCCTGCCTCACCTGCAACCCCTCCACCTCCGAAG
AGTCATATACCCCCGCTGCCGTGTGCTACTCCTGCTCTATCTCCTGCCAT
GGTGAACACGATCTCGTTGAACTATTCAACAAGCGGAACTTCGTCTGCGA
CTGTGGAACAACCCGCATGCCCGCCACCTCCCCATGCACCCTTCGGAATG
ATCCCAAGACCGGCGCGAAAGGCGTGCACTCAGAACAGCCTCACCAAGGC
AACAAATACAACCACAACTTCCAGAACAAGTTTTGCGGATGCGGCGAGGA
CTATGACCCGCATAAGGAACGCGGTACGATGTTTCAATGTTTGGGTCTGG
GCACAGTAGAGACAGGTGGTTGTGGCGAAGACTGGTGGCATCCGGAATGC
CTGATCGGATTGCCGCGCGACTGGTACAAGGGTGCAAAGAAAGATGGAGC
TGCCGATGGAGAGGCAGCCGACGAGGACGAGGAAGAAGAGACTCCTCTCC
CTCCCGGATTCCCCGCGGAAGAGGACTTTGCGATCTTCCTCTGCTACAAG
TGCGTTGACTCGAATCCCTGGGTAAAGCGCTACGCAGGAACACCGGGCTT
CCTGCCTCCAGTATACAAAGAAGGCGGACTCGCCGAACCCTCAGAGGAGG
ACACCAAACCTACCACTACAGAACAAACAACCCAGTCCACAGAACCAGAG
CAGCCCAGCAACCCCAAGAAACGCAAAGCCGACGACAGCGCCGACGAAGA
AGGCGATCCGGCTGCGAAACGACCAAAGGAGGAGCCTAAAGAGGAGCCCA
AACCCGATACGGACGACACTACTACTACCACCATCACCACCACCACTTCC
GAATCTAAACCCACCACCACTCAAGATACCGACAAGCCCATCACCACCGA
ACCCTCCTTTACCTCCTCCAACCCATCCGCACCCAAACACACCCACCTCC
CCACAACACCCCCAAGCCGCACCTTCTCCCTCTTCCTGAAAGACGACTTC
CGCGACCACTTCTGCCGCTGCCGCGACTGCTACCCACACCTAGCATCGCA
TCCACAACTCCGCGAAGAAGAAGAGACCTATGAACCGCCCATGTCCGAAG
ACGGCGACGGCGACGGCCCCAACGGCGGAGGCAGCACCGGCACGGGCAGT
CTTCTCGATCGGGGCGAAGCAGCGCTGAGCAACATCGACCGAGTGCGCGC
CATCGAGGGCGCAATGGTGTACAACCATCTGCGCGATAAGGTGAAGGAGT
TTCTGAAGCCGTTTGCGGAGACCGGGAAGGCGGTTAGTGCGGAGGATATC
AAGTCTTATTTTGAGAAGTTGAGGGGTGATGAGCAGTCGATTCGGGATGC
GGCGTCTTCTGCTGCTGGTGGGGGTGGGGGTGACGATGGTGATGGTGGGG
ATGGAGGTAATCGGAGAGAACAGAGTGGTATGTAGATCTTTCCCCCCTTC
TGCGTTTGACTTGTTGGGGGGGGAGGGAATGGTTTGGTTGCTTTGGATGT
GGATTTGCTAACTTGGGTGATTATTTTCAGGATATTGATTTTGTTATGTT
ATATATGGGGTTTAGTTGATGTTACGGGTACAGGATTGGATTAGGGTGCT
TCCTATGGGTTGGGGAGGGCGTCACAATTGGGTCTCTTGCATTTAGTCTC
AAGATAATCGGCATATTCAGAAGGATATCAAGATTGAACACATAAGATAC
CGTGTCACGAATTTGGAGTTAGCTCATATCATTGAATGCATGCTTGCTAG
TTCAAAGTATTCCTGATCTCTAGCTTTGTGCATGAACATAAGAAGCATCG
CAATATAACAGAAAACGCCAGTTTCAAATGCATATCTCGAGATCCGCACA
AAATGCCACCCAAGTCCTAAACGCCTTGTAATCAAAATCCTTCAAAACAA
ACGAATAATTATCACTCTTTCAAGCGCTTAGTTGCCCTTCCCAACAGACT
ATCATCAGGCAATCCGCTGCGCTTCGTGCCAGGTAGGCTACCAGAGCGAA
TATCGTTGTCATCCTGTGTCACCCGGCGATGAGGATACTTGCCCTCAAAT
CCCTCGAAACAATTGGCGGATATAGGCCCCCCGTTCTTAAAGTAGGGATG
CTCGAGAGCTTCTTGCGCGGTGATCCTCTTGGTCGGGTCGTATTCCAGTA
GGCGTGACAGCAGATCGAAACCATCTGCCCCGGGTGTGCCAGCACTCGAG
TTGGCGGAGTACCCGTTGTTCTTCAGGCAACTCTGATACCAGCCTTCCAA
ATTAGATGATCTGTTGAAATGCCCAGGTGCACGTGACATTGCCAATGACT
GCAGCTGCGAATATTCCGGCATGGACACGATGCCAGGCCAGATCTCCTTG
GTTGGAAGCCCCATAATCTCGATGATCTTCATCATCTGATTGCGCTGGAA
TGGCACCGTCTTTTTACTGTCCATCTTGGCTTCCTCACCCTTAAAGATGG
GGCGGAGCGATAGCAGCTCCGCAAAAATGCACCCGACGGCCCACAAGTCA
ACAGCTGGTGTGTAGTGACGACTACCCATCAAGAGCTCGGGGGCACGGTA
CCAGATGGTGACGACAACCTTGTCTCCAGAAAATAGAGAGTTGAGTGGCT
TGTAGAAGAGACGGGCAAGTCCCAAATCTCCGATGCGAATGGCACCACTT
GAGGTCACTAAGATATTTGCTGGTTTAAGGTCCCGATGCAGTACCCAGTT
GGTGTGGAGATACAGTAGGCCATTGAGCAACTGAAACAGGATCGACCTCA
CCATCAAGGCCGGAATGGCATGCCTTTGCGGTTGGGTGTGATGGTGAATA
ATCTGGAGCAGGTCATGCTCGGTGTACTCAAAGACCATGAAGATACACTT
GTCCTCCAGGATGATTTCTGCCAATTGCACTACATTGGGATGGTCCAATT
CTGAGCACAAGGCCATTTCTCGGATGGCCGACTGGGAAAGACCGGTATAC
TGAATTATTTCGCCTTCTTTATCCGGCTTGAACCTAC back to topCoding sequence (CDS) from alignment at ch1:1201192..1204628+ >KJC3_000563-T1 ID=KJC3_000563-T1|Name=KJC3_000563-T1|organism=Aspergillus niger KJC3|type=CDS|length=6564bp|location=Sequence derived from alignment at ch1:1201192..1204628+ (Aspergillus niger KJC3)
ATGGCCAACACCGAGTCGGGCGACTCAATCCTCAATGCCGGACAGGCACT
GAGCGGACAGACTACCGCAGGGCGCCGCGAGAGCTTCAGCTCTCAAAACT
CGCAGACGGCGAAGGAATTCATCGAATCCCAGATTCGACTTGAAGCCGAT
GCGCGTGAAGTCCTTCCATATTCATTCGACACTTGTACACAAGACTTAGG
TCCCCTTCGCCAATCTCTTTTTGCCTGCCTCACCTGCAACCCCTCCACCT
CCGAAGAGTCATATACCCCCGCTGCCGTGTGCTACTCCTGCTCTATCTCC
TGCCATGGTGAACACGATCTCGTTGAACTATTCAACAAGCGGAACTTCGT
CTGCGACTGTGGAACAACCCGCATGCCCGCCACCTCCCCATGCACCCTTC
GGAATGATCCCAAGACCGGCGCGAAAGGCGTGCACTCAGAACAGCCTCAC
CAAGGCAACAAATACAACCACAACTTCCAGAACAAGTTTTGCGGATGCGG
CGAGGACTATGACCCGCATAAGGAACGCGGTACGATGTTTCAATGTTTGG
GTCTGGGCACAGTAGAGACAGGTGGTTGTGGCGAAGACTGGTGGCATCCG
GAATGCCTGATCGGATTGCCGCGCGACTGGTACAAGGGTGCAAAGAAAGA
TGGAGCTGCCGATGGAGAGGCAGCCGACGAGGACGAGGAAGAAGAGACTC
CTCTCCCTCCCGGATTCCCCGCGGAAGAGGACTTTGCGATCTTCCTCTGC
TACAAGTGCGTTGACTCGAATCCCTGGGTAAAGCGCTACGCAGGAACACC
GGGCTTCCTGCCTCCAGTATACAAAGAAGGCGGACTCGCCGAACCCTCAG
AGGAGGACACCAAACCTACCACTACAGAACAAACAACCCAGTCCACAGAA
CCAGAGCAGCCCAGCAACCCCAAGAAACGCAAAGCCGACGACAGCGCCGA
CGAAGAAGGCGATCCGGCTGCGAAACGACCAAAGGAGGAGCCTAAAGAGG
AGCCCAAACCCGATACGGACGACACTACTACTACCACCATCACCACCACC
ACTTCCGAATCTAAACCCACCACCACTCAAGATACCGACAAGCCCATCAC
CACCGAACCCTCCTTTACCTCCTCCAACCCATCCGCACCCAAACACACCC
ACCTCCCCACAACACCCCCAAGCCGCACCTTCTCCCTCTTCCTGAAAGAC
GACTTCCGCGACCACTTCTGCCGCTGCCGCGACTGCTACCCACACCTAGC
ATCGCATCCACAACTCCGCGAAGAAGAAGAGACCTATGAACCGCCCATGT
CCGAAGACGGCGACGGCGACGGCCCCAACGGCGGAGGCAGCACCGGCACG
GGCAGTCTTCTCGATCGGGGCGAAGCAGCGCTGAGCAACATCGACCGAGT
GCGCGCCATCGAGGGCGCAATGGTGTACAACCATCTGCGCGATAAGGTGA
AGGAGTTTCTGAAGCCGTTTGCGGAGACCGGGAAGGCGGTTAGTGCGGAG
GATATCAAGTCTTATTTTGAGAAGTTGAGGGGTGATGAGCAGTCGATTCG
GGATGCGGCGTCTTCTGCTGCTGGTGGGGGTGGGGGTGACGATGGTGATG
GTGGGGATGGAGGTAATCGGAGAGAACAGAGTGGATATTGAATGGCCAAC
ACCGAGTCGGGCGACTCAATCCTCAATGCCGGACAGGCACTGAGCGGACA
GACTACCGCAGGGCGCCGCGAGAGCTTCAGCTCTCAAAACTCGCAGACGG
CGAAGGAATTCATCGAATCCCAGATTCGACTTGAAGCCGATGCGCGTGAA
GTCCTTCCATATTCATTCGACACTTGTACACAAGACTTAGGTCCCCTTCG
CCAATCTCTTTTTGCCTGCCTCACCTGCAACCCCTCCACCTCCGAAGAGT
CATATACCCCCGCTGCCGTGTGCTACTCCTGCTCTATCTCCTGCCATGGT
GAACACGATCTCGTTGAACTATTCAACAAGCGGAACTTCGTCTGCGACTG
TGGAACAACCCGCATGCCCGCCACCTCCCCATGCACCCTTCGGAATGATC
CCAAGACCGGCGCGAAAGGCGTGCACTCAGAACAGCCTCACCAAGGCAAC
AAATACAACCACAACTTCCAGAACAAGTTTTGCGGATGCGGCGAGGACTA
TGACCCGCATAAGGAACGCGGTACGATGTTTCAATGTTTGGGTCTGGGCA
CAGTAGAGACAGGTGGTTGTGGCGAAGACTGGTGGCATCCGGAATGCCTG
ATCGGATTGCCGCGCGACTGGTACAAGGGTGCAAAGAAAGATGGAGCTGC
CGATGGAGAGGCAGCCGACGAGGACGAGGAAGAAGAGACTCCTCTCCCTC
CCGGATTCCCCGCGGAAGAGGACTTTGCGATCTTCCTCTGCTACAAGTGC
GTTGACTCGAATCCCTGGGTAAAGCGCTACGCAGGAACACCGGGCTTCCT
GCCTCCAGTATACAAAGAAGGCGGACTCGCCGAACCCTCAGAGGAGGACA
CCAAACCTACCACTACAGAACAAACAACCCAGTCCACAGAACCAGAGCAG
CCCAGCAACCCCAAGAAACGCAAAGCCGACGACAGCGCCGACGAAGAAGG
CGATCCGGCTGCGAAACGACCAAAGGAGGAGCCTAAAGAGGAGCCCAAAC
CCGATACGGACGACACTACTACTACCACCATCACCACCACCACTTCCGAA
TCTAAACCCACCACCACTCAAGATACCGACAAGCCCATCACCACCGAACC
CTCCTTTACCTCCTCCAACCCATCCGCACCCAAACACACCCACCTCCCCA
CAACACCCCCAAGCCGCACCTTCTCCCTCTTCCTGAAAGACGACTTCCGC
GACCACTTCTGCCGCTGCCGCGACTGCTACCCACACCTAGCATCGCATCC
ACAACTCCGCGAAGAAGAAGAGACCTATGAACCGCCCATGTCCGAAGACG
GCGACGGCGACGGCCCCAACGGCGGAGGCAGCACCGGCACGGGCAGTCTT
CTCGATCGGGGCGAAGCAGCGCTGAGCAACATCGACCGAGTGCGCGCCAT
CGAGGGCGCAATGGTGTACAACCATCTGCGCGATAAGGTGAAGGAGTTTC
TGAAGCCGTTTGCGGAGACCGGGAAGGCGGTTAGTGCGGAGGATATCAAG
TCTTATTTTGAGAAGTTGAGGGGTGATGAGCAGTCGATTCGGGATGCGGC
GTCTTCTGCTGCTGGTGGGGGTGGGGGTGACGATGGTGATGGTGGGGATG
GAGGTAATCGGAGAGAACAGAGTGGATATTGAATGGCCAACACCGAGTCG
GGCGACTCAATCCTCAATGCCGGACAGGCACTGAGCGGACAGACTACCGC
AGGGCGCCGCGAGAGCTTCAGCTCTCAAAACTCGCAGACGGCGAAGGAAT
TCATCGAATCCCAGATTCGACTTGAAGCCGATGCGCGTGAAGTCCTTCCA
TATTCATTCGACACTTGTACACAAGACTTAGGTCCCCTTCGCCAATCTCT
TTTTGCCTGCCTCACCTGCAACCCCTCCACCTCCGAAGAGTCATATACCC
CCGCTGCCGTGTGCTACTCCTGCTCTATCTCCTGCCATGGTGAACACGAT
CTCGTTGAACTATTCAACAAGCGGAACTTCGTCTGCGACTGTGGAACAAC
CCGCATGCCCGCCACCTCCCCATGCACCCTTCGGAATGATCCCAAGACCG
GCGCGAAAGGCGTGCACTCAGAACAGCCTCACCAAGGCAACAAATACAAC
CACAACTTCCAGAACAAGTTTTGCGGATGCGGCGAGGACTATGACCCGCA
TAAGGAACGCGGTACGATGTTTCAATGTTTGGGTCTGGGCACAGTAGAGA
CAGGTGGTTGTGGCGAAGACTGGTGGCATCCGGAATGCCTGATCGGATTG
CCGCGCGACTGGTACAAGGGTGCAAAGAAAGATGGAGCTGCCGATGGAGA
GGCAGCCGACGAGGACGAGGAAGAAGAGACTCCTCTCCCTCCCGGATTCC
CCGCGGAAGAGGACTTTGCGATCTTCCTCTGCTACAAGTGCGTTGACTCG
AATCCCTGGGTAAAGCGCTACGCAGGAACACCGGGCTTCCTGCCTCCAGT
ATACAAAGAAGGCGGACTCGCCGAACCCTCAGAGGAGGACACCAAACCTA
CCACTACAGAACAAACAACCCAGTCCACAGAACCAGAGCAGCCCAGCAAC
CCCAAGAAACGCAAAGCCGACGACAGCGCCGACGAAGAAGGCGATCCGGC
TGCGAAACGACCAAAGGAGGAGCCTAAAGAGGAGCCCAAACCCGATACGG
ACGACACTACTACTACCACCATCACCACCACCACTTCCGAATCTAAACCC
ACCACCACTCAAGATACCGACAAGCCCATCACCACCGAACCCTCCTTTAC
CTCCTCCAACCCATCCGCACCCAAACACACCCACCTCCCCACAACACCCC
CAAGCCGCACCTTCTCCCTCTTCCTGAAAGACGACTTCCGCGACCACTTC
TGCCGCTGCCGCGACTGCTACCCACACCTAGCATCGCATCCACAACTCCG
CGAAGAAGAAGAGACCTATGAACCGCCCATGTCCGAAGACGGCGACGGCG
ACGGCCCCAACGGCGGAGGCAGCACCGGCACGGGCAGTCTTCTCGATCGG
GGCGAAGCAGCGCTGAGCAACATCGACCGAGTGCGCGCCATCGAGGGCGC
AATGGTGTACAACCATCTGCGCGATAAGGTGAAGGAGTTTCTGAAGCCGT
TTGCGGAGACCGGGAAGGCGGTTAGTGCGGAGGATATCAAGTCTTATTTT
GAGAAGTTGAGGGGTGATGAGCAGTCGATTCGGGATGCGGCGTCTTCTGC
TGCTGGTGGGGGTGGGGGTGACGATGGTGATGGTGGGGATGGAGGTAATC
GGAGAGAACAGAGTGGATATTGAATGGCCAACACCGAGTCGGGCGACTCA
ATCCTCAATGCCGGACAGGCACTGAGCGGACAGACTACCGCAGGGCGCCG
CGAGAGCTTCAGCTCTCAAAACTCGCAGACGGCGAAGGAATTCATCGAAT
CCCAGATTCGACTTGAAGCCGATGCGCGTGAAGTCCTTCCATATTCATTC
GACACTTGTACACAAGACTTAGGTCCCCTTCGCCAATCTCTTTTTGCCTG
CCTCACCTGCAACCCCTCCACCTCCGAAGAGTCATATACCCCCGCTGCCG
TGTGCTACTCCTGCTCTATCTCCTGCCATGGTGAACACGATCTCGTTGAA
CTATTCAACAAGCGGAACTTCGTCTGCGACTGTGGAACAACCCGCATGCC
CGCCACCTCCCCATGCACCCTTCGGAATGATCCCAAGACCGGCGCGAAAG
GCGTGCACTCAGAACAGCCTCACCAAGGCAACAAATACAACCACAACTTC
CAGAACAAGTTTTGCGGATGCGGCGAGGACTATGACCCGCATAAGGAACG
CGGTACGATGTTTCAATGTTTGGGTCTGGGCACAGTAGAGACAGGTGGTT
GTGGCGAAGACTGGTGGCATCCGGAATGCCTGATCGGATTGCCGCGCGAC
TGGTACAAGGGTGCAAAGAAAGATGGAGCTGCCGATGGAGAGGCAGCCGA
CGAGGACGAGGAAGAAGAGACTCCTCTCCCTCCCGGATTCCCCGCGGAAG
AGGACTTTGCGATCTTCCTCTGCTACAAGTGCGTTGACTCGAATCCCTGG
GTAAAGCGCTACGCAGGAACACCGGGCTTCCTGCCTCCAGTATACAAAGA
AGGCGGACTCGCCGAACCCTCAGAGGAGGACACCAAACCTACCACTACAG
AACAAACAACCCAGTCCACAGAACCAGAGCAGCCCAGCAACCCCAAGAAA
CGCAAAGCCGACGACAGCGCCGACGAAGAAGGCGATCCGGCTGCGAAACG
ACCAAAGGAGGAGCCTAAAGAGGAGCCCAAACCCGATACGGACGACACTA
CTACTACCACCATCACCACCACCACTTCCGAATCTAAACCCACCACCACT
CAAGATACCGACAAGCCCATCACCACCGAACCCTCCTTTACCTCCTCCAA
CCCATCCGCACCCAAACACACCCACCTCCCCACAACACCCCCAAGCCGCA
CCTTCTCCCTCTTCCTGAAAGACGACTTCCGCGACCACTTCTGCCGCTGC
CGCGACTGCTACCCACACCTAGCATCGCATCCACAACTCCGCGAAGAAGA
AGAGACCTATGAACCGCCCATGTCCGAAGACGGCGACGGCGACGGCCCCA
ACGGCGGAGGCAGCACCGGCACGGGCAGTCTTCTCGATCGGGGCGAAGCA
GCGCTGAGCAACATCGACCGAGTGCGCGCCATCGAGGGCGCAATGGTGTA
CAACCATCTGCGCGATAAGGTGAAGGAGTTTCTGAAGCCGTTTGCGGAGA
CCGGGAAGGCGGTTAGTGCGGAGGATATCAAGTCTTATTTTGAGAAGTTG
AGGGGTGATGAGCAGTCGATTCGGGATGCGGCGTCTTCTGCTGCTGGTGG
GGGTGGGGGTGACGATGGTGATGGTGGGGATGGAGGTAATCGGAGAGAAC
AGAGTGGATATTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008270 | zinc ion binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000563-T1.utr5p1 | KJC3_000563-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000563-T1.utr3p1 | KJC3_000563-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09262E7W |
| DBxref | InterPro:IPR003126 |
| DBxref | PFAM:PF02207 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:1201192..1204628 + |
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