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KJC3_000565-T1, KJC3_000565-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_000565-T1
Unique NameKJC3_000565-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:1206424..1207962+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_000565-T1 ID=KJC3_000565-T1|Name=KJC3_000565-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1539bp|location=Sequence derived from alignment at ch1:1206424..1207962+ (Aspergillus niger KJC3)
ATGGTCTCACCAGAGCCGATCCGATCTCGGGTCACGCCATACTTGGTTTA
CCTCGTGTTTATCACAACATTAGGACCACTCCAATTCGGTTATCATCTGG
TGAGTATTACCTTCCCACATCTAAAACCTCAAATCCCACTCATACTAACG
CTTATTATCCGACAGGCCGAACTTAATGCCCCTCAGGCGGTGATCACCTG
CGAGCGGAAGCGTATCCATATCTCCACCAATGCCGTCTCTCTACCACAAT
GTATCCCAATGAACGCTTCGCAATTCGGCCTGGTGTCATCAATCTACACC
CTTGGCGGACTCTTGGGAGCCCTGCTGGCAGGGCCAGTCGCCACCAAACA
TGGTCGTCTCTTTGCTCTGCGAGCAACCACTCTCTTCTTCATCCTGGGGC
CTGTGGCTGAAACATGCGCATCCAACATCCCCCTTCTAAGCCTGGGCCGG
CTGCTGTCCGGCATTGGAGCAGGAGCTGCGATTGTCGTCGGCCCCATCTA
CATTTCAGAAATCGCCCCACCCAGCGCCAGAGGTTTCTTTGGTGCCTTCA
CGCAGGTCATGACCAACGTCGGCATCCTGTTGACCCAGTCCCTCGGATAC
TTCCTAAGCGAGGGCAGCAAATGGCGAGTGATTCTCGCCATTGCCGGCTT
CATCGGAGCCCTCCAGCTCCTCGGTCTCACCCTAGTTCCAGAAAGCCCCA
CCTGGCTCGCCGAGCACCAAAAGAGCAGTCTAGCCAGACAAGTCCTGCAA
CGGCTCCGCGGAAAGGACGCAGACATCGAAGAGGAAATCGAAGGATGGCC
ATCCTCAACAGGCCGACCAACAGATGGTTCCGGCGAAGAGCAATCACTCC
TCACGCCACCATCCGGCAACATGCCACCCAAACAGCCCCCCGTCACGATC
TTCCACGCCATCACTAACCCATCCTACCGACCAGCCATCATCGCCGTCGT
CGGCGTAATGGTCGCTCAACAATTCACCGGCATCAACAGCATCATCATGT
ACAGTGTCTCCCTATTACAAACCATCCTCCCCACCACCGCCGCCCTCCTA
ACCGTAATCATCTCCGCCATCAACCTCATCATCACACTCGCCTGCTCCCC
GCTCCCAGACAAAATCGGCCGTAGATCCTGCCTTCTCCTCAGCATCAGCG
GCATGGGATTCAATTCCATTCTCCTAGCCCTAGGCATCTACTTCAACCAG
AAGGTCCTCTCCGCCATCGCCGTCCTTCTCTTCGTCTCCTGCTTCGCCGT
CGGCCTAGGCCCCGTTCCGTTCATCCTTGCCTCGGAGCTCGTCGGTCCTG
AAGCCGTCGGCGCCACGCAAAGCTGCGCTCTAGCTGCCAACTGGATCGCC
ACTTTCGTGGTGGCGCAATTCTTCCCCATGTTGAATGATGCTCTTGGCGG
CCGTGGCAAGATTTACTGGGTTTTCACCGGCATGGCTTGTCTTCTTGGTG
GGTTTATCTATTGGCGTGTTCCGGAGACGAAGGGGAAGACTAGTGCAGAT
GAGGTCTGGGGGAGAGATCATCGTCGACGACGGGATTGA
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Coding sequence (CDS) from alignment at ch1:1206424..1207962+

>KJC3_000565-T1 ID=KJC3_000565-T1|Name=KJC3_000565-T1|organism=Aspergillus niger KJC3|type=CDS|length=2946bp|location=Sequence derived from alignment at ch1:1206424..1207962+ (Aspergillus niger KJC3)
ATGGTCTCACCAGAGCCGATCCGATCTCGGGTCACGCCATACTTGGTTTA
CCTCGTGTTTATCACAACATTAGGACCACTCCAATTCGGTTATCATCTGG
CCGAACTTAATGCCCCTCAGGCGGTGATCACCTGCGAGCGGAAGCGTATC
CATATCTCCACCAATGCCGTCTCTCTACCACAATGTATCCCAATGAACGC
TTCGCAATTCGGCCTGGTGTCATCAATCTACACCCTTGGCGGACTCTTGG
GAGCCCTGCTGGCAGGGCCAGTCGCCACCAAACATGGTCGTCTCTTTGCT
CTGCGAGCAACCACTCTCTTCTTCATCCTGGGGCCTGTGGCTGAAACATG
CGCATCCAACATCCCCCTTCTAAGCCTGGGCCGGCTGCTGTCCGGCATTG
GAGCAGGAGCTGCGATTGTCGTCGGCCCCATCTACATTTCAGAAATCGCC
CCACCCAGCGCCAGAGGTTTCTTTGGTGCCTTCACGCAGGTCATGACCAA
CGTCGGCATCCTGTTGACCCAGTCCCTCGGATACTTCCTAAGCGAGGGCA
GCAAATGGCGAGTGATTCTCGCCATTGCCGGCTTCATCGGAGCCCTCCAG
CTCCTCGGTCTCACCCTAGTTCCAGAAAGCCCCACCTGGCTCGCCGAGCA
CCAAAAGAGCAGTCTAGCCAGACAAGTCCTGCAACGGCTCCGCGGAAAGG
ACGCAGACATCGAAGAGGAAATCGAAGGATGGCCATCCTCAACAGGCCGA
CCAACAGATGGTTCCGGCGAAGAGCAATCACTCCTCACGCCACCATCCGG
CAACATGCCACCCAAACAGCCCCCCGTCACGATCTTCCACGCCATCACTA
ACCCATCCTACCGACCAGCCATCATCGCCGTCGTCGGCGTAATGGTCGCT
CAACAATTCACCGGCATCAACAGCATCATCATGTACAGTGTCTCCCTATT
ACAAACCATCCTCCCCACCACCGCCGCCCTCCTAACCGTAATCATCTCCG
CCATCAACCTCATCATCACACTCGCCTGCTCCCCGCTCCCAGACAAAATC
GGCCGTAGATCCTGCCTTCTCCTCAGCATCAGCGGCATGGGATTCAATTC
CATTCTCCTAGCCCTAGGCATCTACTTCAACCAGAAGGTCCTCTCCGCCA
TCGCCGTCCTTCTCTTCGTCTCCTGCTTCGCCGTCGGCCTAGGCCCCGTT
CCGTTCATCCTTGCCTCGGAGCTCGTCGGTCCTGAAGCCGTCGGCGCCAC
GCAAAGCTGCGCTCTAGCTGCCAACTGGATCGCCACTTTCGTGGTGGCGC
AATTCTTCCCCATGTTGAATGATGCTCTTGGCGGCCGTGGCAAGATTTAC
TGGGTTTTCACCGGCATGGCTTGTCTTCTTGGTGGGTTTATCTATTGGCG
TGTTCCGGAGACGAAGGGGAAGACTAGTGCAGATGAGGTCTGGGGGAGAG
ATCATCGTCGACGACGGGATTGAATGGTCTCACCAGAGCCGATCCGATCT
CGGGTCACGCCATACTTGGTTTACCTCGTGTTTATCACAACATTAGGACC
ACTCCAATTCGGTTATCATCTGGCCGAACTTAATGCCCCTCAGGCGGTGA
TCACCTGCGAGCGGAAGCGTATCCATATCTCCACCAATGCCGTCTCTCTA
CCACAATGTATCCCAATGAACGCTTCGCAATTCGGCCTGGTGTCATCAAT
CTACACCCTTGGCGGACTCTTGGGAGCCCTGCTGGCAGGGCCAGTCGCCA
CCAAACATGGTCGTCTCTTTGCTCTGCGAGCAACCACTCTCTTCTTCATC
CTGGGGCCTGTGGCTGAAACATGCGCATCCAACATCCCCCTTCTAAGCCT
GGGCCGGCTGCTGTCCGGCATTGGAGCAGGAGCTGCGATTGTCGTCGGCC
CCATCTACATTTCAGAAATCGCCCCACCCAGCGCCAGAGGTTTCTTTGGT
GCCTTCACGCAGGTCATGACCAACGTCGGCATCCTGTTGACCCAGTCCCT
CGGATACTTCCTAAGCGAGGGCAGCAAATGGCGAGTGATTCTCGCCATTG
CCGGCTTCATCGGAGCCCTCCAGCTCCTCGGTCTCACCCTAGTTCCAGAA
AGCCCCACCTGGCTCGCCGAGCACCAAAAGAGCAGTCTAGCCAGACAAGT
CCTGCAACGGCTCCGCGGAAAGGACGCAGACATCGAAGAGGAAATCGAAG
GATGGCCATCCTCAACAGGCCGACCAACAGATGGTTCCGGCGAAGAGCAA
TCACTCCTCACGCCACCATCCGGCAACATGCCACCCAAACAGCCCCCCGT
CACGATCTTCCACGCCATCACTAACCCATCCTACCGACCAGCCATCATCG
CCGTCGTCGGCGTAATGGTCGCTCAACAATTCACCGGCATCAACAGCATC
ATCATGTACAGTGTCTCCCTATTACAAACCATCCTCCCCACCACCGCCGC
CCTCCTAACCGTAATCATCTCCGCCATCAACCTCATCATCACACTCGCCT
GCTCCCCGCTCCCAGACAAAATCGGCCGTAGATCCTGCCTTCTCCTCAGC
ATCAGCGGCATGGGATTCAATTCCATTCTCCTAGCCCTAGGCATCTACTT
CAACCAGAAGGTCCTCTCCGCCATCGCCGTCCTTCTCTTCGTCTCCTGCT
TCGCCGTCGGCCTAGGCCCCGTTCCGTTCATCCTTGCCTCGGAGCTCGTC
GGTCCTGAAGCCGTCGGCGCCACGCAAAGCTGCGCTCTAGCTGCCAACTG
GATCGCCACTTTCGTGGTGGCGCAATTCTTCCCCATGTTGAATGATGCTC
TTGGCGGCCGTGGCAAGATTTACTGGGTTTTCACCGGCATGGCTTGTCTT
CTTGGTGGGTTTATCTATTGGCGTGTTCCGGAGACGAAGGGGAAGACTAG
TGCAGATGAGGTCTGGGGGAGAGATCATCGTCGACGACGGGATTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_000565KJC3_000565Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000565-T1.exon1KJC3_000565-T1.exon1Aspergillus niger KJC3exon
KJC3_000565-T1.exon2KJC3_000565-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000565-T1.cdsKJC3_000565-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000565-T1KJC3_000565-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR020846
DBxrefInterPro:IPR005829
DBxrefInterPro:IPR005828
DBxrefInterPro:IPR003663
DBxrefPFAM:PF00083
DBxrefPFAM:PF07690
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:1206424..1207962 +
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