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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:1231672..1235660- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000570-T1 ID=KJC3_000570-T1|Name=KJC3_000570-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3989bp|location=Sequence derived from alignment at ch1:1231672..1235660- (Aspergillus niger KJC3)
GCCATCCAGGAGAGTCAGTCACTGCCAGTAATCACCGTCACTAAGTAGAG
TGATTCGCATGATCGATCCCAATCAATAGTTCCAGTTCCCTTCTCTCCGG
GTCTGCTTGCTGTCCCTTTCTCTGCTCCTGCTCTTGTTGCTGCTTCTCCT
TCTTCATCTCCTTTCATTCCCTGGTCGTCCTGTTGCTATTTCTATTCACT
ACCAACGCCTCTATCTCCCTTCCCCGCTGGTTCCTCTCTTTCCCTCCCTC
CTCTCTCCCTCCCTCTCTCTCTCTCTCTCTCTTCTCTCAGTCGCCCTCTT
TCTCTGCTTCCCCCTCAGCCTCTTACCACTCACCACCCTTCCCCTACCCA
CCCCGTCTTCAGTTCTTCATTATTTCCCCCTTTTTCCTTCATTCCTTCTC
CAATAGTGTCTATTCATCTCGCTACCTCCACTTTACCTTCCTTTTCTACT
CCTTGACTCTCCATATTTCCGACGAGCGGTCGCTGTTGTTGGCTTAACAT
TCTAAAGAACTTGAAGTTCCTTGGGTGGTCTGCCTGGGGCTCCCGGTTAA
CTGGACGGTCCTCTTCTAAGCGCGGAACTCGAACTGGGAAAAGGAAAAAG
GCACGGAAAAAAAGAAAAAAAAGAAAAATAGCGGCCAAACACGCGCCGAA
CTCCCGAAACGAAGCACCCGGCGTCGCCTCTCGTTTCTTCCTCCACTTCT
TTCTTTTCGTCAGGTTCGACGTGCGGAAAATAGCAGTCACAAACGGAGAG
GCACAAAAGGAGGAATAGTAAAAAGAAGTGAAGAAAAGTGGATAAAAAAA
GAATTAAGGAACACTCCGTCAGAAAAGCGAAAAGTTTTGATTTACCCTCC
CTACCGCGACCGCGTGCTTCTTCCATCTCGACGGTCTGAACGGTAGACCG
AACCTTCTCGTCTCCTGCATCTTGTGTCTCGAGCATCATTTTCTACGGTT
ACAAGGGAGTTGCAGAGCATCTCCGGTCCGTTTATTATCTTCTGTCTTTT
AATACAGAGAACCTCCGTCCTCTCGTCATCCGAGACTCGCTCAGGTCTTC
CTTTCTCACCGGTCGCGTCCCCATCTTCCGTCTCGTGAGCCAGTTGAATC
CTTTCATCGGCTTCTGACGCCTGGCCCTATAATCGCTTGTACACCTGGTT
ATTAATCACTCCTTGGCTTTTTTTCGCCTATTCTATCAAGGCACATCTCT
GCGTGTGCCTTCTTGTATTCTGCAGGTACTGGATTTCACCGTGGACACTG
CCTCCAAAAGCCAAGCTAACACCGCTTTCTGCAGGGAGTCCGGACTTTCG
CCCCGTTCGTTGCCTACCTATTAACCCCTCCGTTTCCCGGTGTCGGTTAT
TCACTTCGGTGCTCCATCCTATCCTCGACCTTGTAATATTTTAATACGCC
GAAGGATCCTTTGTGGTCGACCACATCGCGTCTCCAATCGCTAAATCGTT
AGCACCGTTTCGTTTCGTCAATTGCACATACTGTTTTATACTCCTTTATA
GCTACGAGTATGGACACTGGCGGTCTTGCTCAAATGACCTACAACTCCTC
TTTCAATAATGGCAGTGCCCTCGGGGTGCCTGGAGCCAGCTTTGGTTCTC
GCAGGAAAGGCTCCCATATCAAGCGTTTGAGCGTGCCTCCACCGCACATC
TCGACCATCGATGAGTCTCAGCCATCTGCACCGATCCCGACTCCGCGCAC
CAGCCGTTCGCACCTGCTTGCTGGTTTAAGGACGGCTCCCAAGTCAGCCA
CAATGCCCTCGGCTTCTCAACGCCAGCAGCACCTTGGCTTGGAGGGTGAT
AGATATGGCAATCTCTCGAACCGAACTGCAGATCGCATTCCTCAAACCGC
CATGGGAACCGGATTCCCTCGTCATTCATTAGCCGTCAATCAGGGTCTGG
ACATGAACACGGGGCGCCCCATGTACACTCTGCCGGAGCAGGTGCTCGCA
CCTCCGGCTCTTGACATCGCTGGCGATACGCAGATCGACGAGAGCCTGTA
CGCGGAGCTGATGTCGACCAACCTCTTCTTGGCTGCCCAGCAACAGCGCT
TGCAACAGCAGCTGATCAGCGTCACCGCGGCCGCTCAGCAGTTTCAGGGT
CTTAATCTGGGAACCCCTATGGTCCAGCAGCAGCAACAGGATTACCCTTC
TCTGTCCCTCCCCGGTATGGGATTTTACCAGCAGCAGCTTCAGCAAGGCG
TGCAGCCTGTGGTGCAGCCTGTTCCTGGCCAGCCGGGCCTCTACTCGGTT
TACAACCCCTTGACTGGGCAGCAAAACTATATTTATGACAATACCTTCCA
ACAGGACAGTACGCCACAGTACCAAGAAGAGGAGACCCAGTCCCCCTCAG
TTCAGGTACCTACCTTCAGAGCTGAGGTGTCACCGCCGCCTGAAAACCGC
CAATCTCCTGTGAATGTTTCTCAGCCTGTGTCTCCTCCCAGCGGCCGTTC
CTCCCCGCAAGAAACTGCTCCTCTGCCTCCTCCCTCGGCGAATGCTTTCC
GCAGGGGTCACAAGAAGAGCTCATCCTTCAACCCTGCGCTCAAGATGCCA
CTTGACACGGCCAAGGCCAATACTGCCATCACACCCGCAGCTCCCAAGAC
TGCGGCGTTGCCTCAGACCCCAGCTACTGGAACCTTTGGGCCCGGACAGG
CTCGTGCGGGCGAGCACCCGATCCGCCAACCCCGTGGACCACCTTCCCTT
GAGGAGCTTACAGCCAAGCCAACATCGAAGCACGAGGGAAGCAAGAACTT
CGCAACCCGTCAGCGTCGACGTGCGGTGCACAACTTGGTTCGTGCGGGCA
TTGAACGACGTGGCGAAACTCGGAGCTTTGGCTGCCATAGCAGTGGTGGC
ACCAATACCCCTGCGAGCGAGAAGGAATTCACGTTCTCCGATGGGGATGA
CGCTACGGTTCGCAGTGGTAGCCTGTCCAGCAAACCCAGCCTGGGTAGTC
TGCGCGCCGCTGCGAACGGAGCCATTGGTTCTGAGAGGAAGGAGAGGTCT
TCCCGAGAACGCCGATCCCAGGATAGCCCCTACAACACCACTCCCATCAG
CGAAGATGGCGGTTTCTTTGGCGGAAAGTTTGCCGAGGTTCGAGCGGATC
AGGCCTCTCCTCGAACCGGATCACCCTCAGTGGCTGCTGTCGTCGCTGGC
CAGAAGACGGTAGCTCAGGGTCAGGAAAGACGCAAGACTCCCATGCTTGT
GCTCTCCAGCGCTGAAAAGCGTAAGACCCCGATCATGTAATGCCAACGTC
GTACATAATGTGACTTTGAGACGTAACGGACGTGCAAAGCTTGGATGATT
TGTTTTCTTTTATTTTTGTTTTCTACTTTTTCTTGTTGGATTTGAGCTCC
TGCAGGCACCGCAGTTCTATTTCTACCCGGAATAAACTAGACGGTTAATC
TTGATGTCATGGCAGGATTTTGAGAGAGATCCTCAGCCTCGGCCTAAGTT
TCTCTCTCCTTTTTGACACTGTGCATGGACACATGGCCAGGACTCTGCCC
CGTCGATGACCCAATCCTTCTGTCTGACGAAGCAAGCCTCGGATGAAATG
TGAATTTTTTTTTTCTACCTGTTATTATTTGCACCCTCTTTTCTCTTCCC
CTTCTTATCCTTTCCTTCGACCTGAACAGATTGATGAACCACGAGACCAG
AATCATTAAATCAAGATTTTCTTTATCTCTTTGTTTTTCCTGCCCACTTG
AGCTGGTGTCTTTTGATTTTTCCAAGCGGGAAATCGCAAGAGTCTGCTGG
AACTGGTAATGGATCCTGGTTATCTCTCCGCTACCTCCTTATTCTTTCCT
TTCCTTGCACTGGTCCATCTTGGGACGGGATACTTTTACTTGTACGTACA
TACATCTGGCTATGTATGCTCTTTCTTTTTGACCAGAGTTTGGAAACTTC
TGGATACTGAATGCTAGAGGGCTACTGCTACCTAAATGCTTAAGTGGGCC
TTGGCTTTATTCTGCTCTCAATGCAATCTACCTACTTAG back to topCoding sequence (CDS) from alignment at ch1:1231672..1235660- >KJC3_000570-T1 ID=KJC3_000570-T1|Name=KJC3_000570-T1|organism=Aspergillus niger KJC3|type=CDS|length=1731bp|location=Sequence derived from alignment at ch1:1231672..1235660- (Aspergillus niger KJC3)
ATGGACACTGGCGGTCTTGCTCAAATGACCTACAACTCCTCTTTCAATAA
TGGCAGTGCCCTCGGGGTGCCTGGAGCCAGCTTTGGTTCTCGCAGGAAAG
GCTCCCATATCAAGCGTTTGAGCGTGCCTCCACCGCACATCTCGACCATC
GATGAGTCTCAGCCATCTGCACCGATCCCGACTCCGCGCACCAGCCGTTC
GCACCTGCTTGCTGGTTTAAGGACGGCTCCCAAGTCAGCCACAATGCCCT
CGGCTTCTCAACGCCAGCAGCACCTTGGCTTGGAGGGTGATAGATATGGC
AATCTCTCGAACCGAACTGCAGATCGCATTCCTCAAACCGCCATGGGAAC
CGGATTCCCTCGTCATTCATTAGCCGTCAATCAGGGTCTGGACATGAACA
CGGGGCGCCCCATGTACACTCTGCCGGAGCAGGTGCTCGCACCTCCGGCT
CTTGACATCGCTGGCGATACGCAGATCGACGAGAGCCTGTACGCGGAGCT
GATGTCGACCAACCTCTTCTTGGCTGCCCAGCAACAGCGCTTGCAACAGC
AGCTGATCAGCGTCACCGCGGCCGCTCAGCAGTTTCAGGGTCTTAATCTG
GGAACCCCTATGGTCCAGCAGCAGCAACAGGATTACCCTTCTCTGTCCCT
CCCCGGTATGGGATTTTACCAGCAGCAGCTTCAGCAAGGCGTGCAGCCTG
TGGTGCAGCCTGTTCCTGGCCAGCCGGGCCTCTACTCGGTTTACAACCCC
TTGACTGGGCAGCAAAACTATATTTATGACAATACCTTCCAACAGGACAG
TACGCCACAGTACCAAGAAGAGGAGACCCAGTCCCCCTCAGTTCAGGTAC
CTACCTTCAGAGCTGAGGTGTCACCGCCGCCTGAAAACCGCCAATCTCCT
GTGAATGTTTCTCAGCCTGTGTCTCCTCCCAGCGGCCGTTCCTCCCCGCA
AGAAACTGCTCCTCTGCCTCCTCCCTCGGCGAATGCTTTCCGCAGGGGTC
ACAAGAAGAGCTCATCCTTCAACCCTGCGCTCAAGATGCCACTTGACACG
GCCAAGGCCAATACTGCCATCACACCCGCAGCTCCCAAGACTGCGGCGTT
GCCTCAGACCCCAGCTACTGGAACCTTTGGGCCCGGACAGGCTCGTGCGG
GCGAGCACCCGATCCGCCAACCCCGTGGACCACCTTCCCTTGAGGAGCTT
ACAGCCAAGCCAACATCGAAGCACGAGGGAAGCAAGAACTTCGCAACCCG
TCAGCGTCGACGTGCGGTGCACAACTTGGTTCGTGCGGGCATTGAACGAC
GTGGCGAAACTCGGAGCTTTGGCTGCCATAGCAGTGGTGGCACCAATACC
CCTGCGAGCGAGAAGGAATTCACGTTCTCCGATGGGGATGACGCTACGGT
TCGCAGTGGTAGCCTGTCCAGCAAACCCAGCCTGGGTAGTCTGCGCGCCG
CTGCGAACGGAGCCATTGGTTCTGAGAGGAAGGAGAGGTCTTCCCGAGAA
CGCCGATCCCAGGATAGCCCCTACAACACCACTCCCATCAGCGAAGATGG
CGGTTTCTTTGGCGGAAAGTTTGCCGAGGTTCGAGCGGATCAGGCCTCTC
CTCGAACCGGATCACCCTCAGTGGCTGCTGTCGTCGCTGGCCAGAAGACG
GTAGCTCAGGGTCAGGAAAGACGCAAGACTCCCATGCTTGTGCTCTCCAG
CGCTGAAAAGCGTAAGACCCCGATCATGTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000570-T1.utr3p1 | KJC3_000570-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:1231672..1235660 - |
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