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KJC3_000575-T1, KJC3_000575-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_000575-T1
Unique NameKJC3_000575-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:1248171..1249571+

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_000575-T1 ID=KJC3_000575-T1|Name=KJC3_000575-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1401bp|location=Sequence derived from alignment at ch1:1248171..1249571+ (Aspergillus niger KJC3)
AACCAACCACATGCAATCTGGAATGCAACCCCTCCCTGGATCAACGTCGT
AAGAAAGAAAGGGGAAAGCCCCATTTTTCTTTCCCACTCTTCTTATCGCC
AGAACAAAAAGCGGGGTAAGCTGCATCGTGTCATACTCTCTTTCATAACT
GTGGCACATAATCCGTATATAAGAAAAGACAGGAATCGTCCCGTCTAGCA
AAGCTAACCAACTTACTCACTCGAGGAATATTCCGCGCCTACATTTGCAC
TTACTAACTAAGTACCAACTCAGCCCTATATATCAACATGACGAAACAAC
TCGCTCCTGGCGCCCGACTGGAGGGCAAGGTTGCTATTGTTACTGGTTAG
GTTCCTTTCTCACTTCTTTTGTGCCCCCTCCTTTTACTATCCCAAGGCCA
ACTCGTGCGACTGTTCGTTCGTGTATTTATCTATCTATATGTCTATTTAC
TGTTTCCGACAAGATATGCCTCGATCTATACACAATACTAACTCAGTCTT
TCCCATCACTAACTGCTAACGAGTAACAACAGGAGCCGGATCCGGTTTCG
GCGCCGCCATCGCACAGCGCTTCGCCTCTGAAGGCGCCAAGGTCATCGTC
GCGGATATCAGTTCCGAAGGGGGCCAGAAGACAGCTGCCGCGGATCCGGA
AAATATCGTGTTCGAGCAGATGGACGTGACCAAGGCAGCAGATTGGAAAC
GCATTGTGGAGAAGGCGGTGTCGTTGTTCGGAAAATTGGATGTGTTGGTG
AATAATGCGGGCACGACGTATCGGAATAAGGTATTTCATTTTATTGATTT
TCCCTCCTCTCATGTTCATTGTGTGCATTAGTGAAGTGAGACTCATGTAT
GGTTGATCAGCCGACGTTGGAGGTTACCGAGGACGAGTGGGAGCGGGTGT
TCAATGTGAATGTCAAGGGAGTTTATCTGGGCAGTCAGGCGTTCGTGGCT
CGGGTGATTGAGCAGGGCCAGGGCGGTTCGATAATTAATATCTCGTCGAC
GGGGGCGTCGAGACCTCGGCCCGGGTTGGTGTGGTATAATGCGTCCAAGG
GTGCGGTTTCTAATGTGAGTAAAATGCTTATGTTTTTCCCTTTGGTGTGG
GGTTCATCGGATACTGATAATATATAACAACCAGGCTACCAAGGGTCTGG
CGGCTGAGTATGGGCCGCATAATATCCGCGTCAACTCGGTTGCTCCTCTT
CTATCGGCTACGCCGTTGTTCTCTGTGTTCACGGGCATGGAGAATACGCC
GGAGAACTGGGAGAAGTTCATCGGAAATGTGCCGTTGGGTCGTCTCACGG
AGGGGGATGACGTCGCAAACATTTGTCTGTATCTGGCCAGTGATGAGGGG
CGTTTTATCAATGGAACGGAGATGGTCATTGATGGTGGGAAGTGTATCTG
A
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Coding sequence (CDS) from alignment at ch1:1248171..1249571+

>KJC3_000575-T1 ID=KJC3_000575-T1|Name=KJC3_000575-T1|organism=Aspergillus niger KJC3|type=CDS|length=3108bp|location=Sequence derived from alignment at ch1:1248171..1249571+ (Aspergillus niger KJC3)
ATGACGAAACAACTCGCTCCTGGCGCCCGACTGGAGGGCAAGGTTGCTAT
TGTTACTGGAGCCGGATCCGGTTTCGGCGCCGCCATCGCACAGCGCTTCG
CCTCTGAAGGCGCCAAGGTCATCGTCGCGGATATCAGTTCCGAAGGGGGC
CAGAAGACAGCTGCCGCGGATCCGGAAAATATCGTGTTCGAGCAGATGGA
CGTGACCAAGGCAGCAGATTGGAAACGCATTGTGGAGAAGGCGGTGTCGT
TGTTCGGAAAATTGGATGTGTTGGTGAATAATGCGGGCACGACGTATCGG
AATAAGCCGACGTTGGAGGTTACCGAGGACGAGTGGGAGCGGGTGTTCAA
TGTGAATGTCAAGGGAGTTTATCTGGGCAGTCAGGCGTTCGTGGCTCGGG
TGATTGAGCAGGGCCAGGGCGGTTCGATAATTAATATCTCGTCGACGGGG
GCGTCGAGACCTCGGCCCGGGTTGGTGTGGTATAATGCGTCCAAGGGTGC
GGTTTCTAATGCTACCAAGGGTCTGGCGGCTGAGTATGGGCCGCATAATA
TCCGCGTCAACTCGGTTGCTCCTCTTCTATCGGCTACGCCGTTGTTCTCT
GTGTTCACGGGCATGGAGAATACGCCGGAGAACTGGGAGAAGTTCATCGG
AAATGTGCCGTTGGGTCGTCTCACGGAGGGGGATGACGTCGCAAACATTT
GTCTGTATCTGGCCAGTGATGAGGGGCGTTTTATCAATGGAACGGAGATG
GTCATTGATGGTGGGAAGTGTATCTGAATGACGAAACAACTCGCTCCTGG
CGCCCGACTGGAGGGCAAGGTTGCTATTGTTACTGGAGCCGGATCCGGTT
TCGGCGCCGCCATCGCACAGCGCTTCGCCTCTGAAGGCGCCAAGGTCATC
GTCGCGGATATCAGTTCCGAAGGGGGCCAGAAGACAGCTGCCGCGGATCC
GGAAAATATCGTGTTCGAGCAGATGGACGTGACCAAGGCAGCAGATTGGA
AACGCATTGTGGAGAAGGCGGTGTCGTTGTTCGGAAAATTGGATGTGTTG
GTGAATAATGCGGGCACGACGTATCGGAATAAGCCGACGTTGGAGGTTAC
CGAGGACGAGTGGGAGCGGGTGTTCAATGTGAATGTCAAGGGAGTTTATC
TGGGCAGTCAGGCGTTCGTGGCTCGGGTGATTGAGCAGGGCCAGGGCGGT
TCGATAATTAATATCTCGTCGACGGGGGCGTCGAGACCTCGGCCCGGGTT
GGTGTGGTATAATGCGTCCAAGGGTGCGGTTTCTAATGCTACCAAGGGTC
TGGCGGCTGAGTATGGGCCGCATAATATCCGCGTCAACTCGGTTGCTCCT
CTTCTATCGGCTACGCCGTTGTTCTCTGTGTTCACGGGCATGGAGAATAC
GCCGGAGAACTGGGAGAAGTTCATCGGAAATGTGCCGTTGGGTCGTCTCA
CGGAGGGGGATGACGTCGCAAACATTTGTCTGTATCTGGCCAGTGATGAG
GGGCGTTTTATCAATGGAACGGAGATGGTCATTGATGGTGGGAAGTGTAT
CTGAATGACGAAACAACTCGCTCCTGGCGCCCGACTGGAGGGCAAGGTTG
CTATTGTTACTGGAGCCGGATCCGGTTTCGGCGCCGCCATCGCACAGCGC
TTCGCCTCTGAAGGCGCCAAGGTCATCGTCGCGGATATCAGTTCCGAAGG
GGGCCAGAAGACAGCTGCCGCGGATCCGGAAAATATCGTGTTCGAGCAGA
TGGACGTGACCAAGGCAGCAGATTGGAAACGCATTGTGGAGAAGGCGGTG
TCGTTGTTCGGAAAATTGGATGTGTTGGTGAATAATGCGGGCACGACGTA
TCGGAATAAGCCGACGTTGGAGGTTACCGAGGACGAGTGGGAGCGGGTGT
TCAATGTGAATGTCAAGGGAGTTTATCTGGGCAGTCAGGCGTTCGTGGCT
CGGGTGATTGAGCAGGGCCAGGGCGGTTCGATAATTAATATCTCGTCGAC
GGGGGCGTCGAGACCTCGGCCCGGGTTGGTGTGGTATAATGCGTCCAAGG
GTGCGGTTTCTAATGCTACCAAGGGTCTGGCGGCTGAGTATGGGCCGCAT
AATATCCGCGTCAACTCGGTTGCTCCTCTTCTATCGGCTACGCCGTTGTT
CTCTGTGTTCACGGGCATGGAGAATACGCCGGAGAACTGGGAGAAGTTCA
TCGGAAATGTGCCGTTGGGTCGTCTCACGGAGGGGGATGACGTCGCAAAC
ATTTGTCTGTATCTGGCCAGTGATGAGGGGCGTTTTATCAATGGAACGGA
GATGGTCATTGATGGTGGGAAGTGTATCTGAATGACGAAACAACTCGCTC
CTGGCGCCCGACTGGAGGGCAAGGTTGCTATTGTTACTGGAGCCGGATCC
GGTTTCGGCGCCGCCATCGCACAGCGCTTCGCCTCTGAAGGCGCCAAGGT
CATCGTCGCGGATATCAGTTCCGAAGGGGGCCAGAAGACAGCTGCCGCGG
ATCCGGAAAATATCGTGTTCGAGCAGATGGACGTGACCAAGGCAGCAGAT
TGGAAACGCATTGTGGAGAAGGCGGTGTCGTTGTTCGGAAAATTGGATGT
GTTGGTGAATAATGCGGGCACGACGTATCGGAATAAGCCGACGTTGGAGG
TTACCGAGGACGAGTGGGAGCGGGTGTTCAATGTGAATGTCAAGGGAGTT
TATCTGGGCAGTCAGGCGTTCGTGGCTCGGGTGATTGAGCAGGGCCAGGG
CGGTTCGATAATTAATATCTCGTCGACGGGGGCGTCGAGACCTCGGCCCG
GGTTGGTGTGGTATAATGCGTCCAAGGGTGCGGTTTCTAATGCTACCAAG
GGTCTGGCGGCTGAGTATGGGCCGCATAATATCCGCGTCAACTCGGTTGC
TCCTCTTCTATCGGCTACGCCGTTGTTCTCTGTGTTCACGGGCATGGAGA
ATACGCCGGAGAACTGGGAGAAGTTCATCGGAAATGTGCCGTTGGGTCGT
CTCACGGAGGGGGATGACGTCGCAAACATTTGTCTGTATCTGGCCAGTGA
TGAGGGGCGTTTTATCAATGGAACGGAGATGGTCATTGATGGTGGGAAGT
GTATCTGA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_000575KJC3_000575Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000575-T1KJC3_000575-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000575-T1.utr5p1KJC3_000575-T1.utr5p1Aspergillus niger KJC3five_prime_UTR
KJC3_000575-T1.utr5p2KJC3_000575-T1.utr5p2Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000575-T1.exon1KJC3_000575-T1.exon1Aspergillus niger KJC3exon
KJC3_000575-T1.exon2KJC3_000575-T1.exon2Aspergillus niger KJC3exon
KJC3_000575-T1.exon3KJC3_000575-T1.exon3Aspergillus niger KJC3exon
KJC3_000575-T1.exon4KJC3_000575-T1.exon4Aspergillus niger KJC3exon
KJC3_000575-T1.exon5KJC3_000575-T1.exon5Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000575-T1.cdsKJC3_000575-T1.cdsAspergillus niger KJC3CDS


Properties
Property NameValue
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR002347
DBxrefPFAM:PF08659
DBxrefPFAM:PF01370
DBxrefPFAM:PF13561
DBxrefPFAM:PF00106
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:1248171..1249571 +
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