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KJC3_000580-T1, KJC3_000580-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_000580-T1
Unique NameKJC3_000580-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:1258661..1260247-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_000580-T1 ID=KJC3_000580-T1|Name=KJC3_000580-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1587bp|location=Sequence derived from alignment at ch1:1258661..1260247- (Aspergillus niger KJC3)
TTAAACTCCTCTCCGTAGGTTAGTAACATTACTTACTACTTACTACGTAG
GCAACTTCCGCCCGTCGCCCGCGCCCGCGCCCGCGCGCGCTGACTGACCA
TAGTAGTACTACGCGCAGTAACCAACCAGTAAACTTTTTTGAAACGATCA
GAAATTTTTTTTTTCTTCTTTCTTTCCCTTCTTACCAATTCTATATATAT
ATATATATACCCACTGTCCCCGATTTACTTTTGGGATAATATTCAATCTA
CTTTCAAATCATATACCCTTATACCCCCTTTCTTTTTTTCATTATTTATT
CAATTGGAAATTCCGGAAACAGCATCATCATCATGTCTGCTGAGGAAGCT
AACACGTCGCTGTTGGAGCGCATTCAGCGCCCCGAGGTGAGCAAGGAGAC
GGCGAAGAAGATTTCTTTGGTGGAGGAGCAGTTTGCTAGGGCGGAGGTGG
AGCAGTGTATGTTCTTTCTTTCTTTCTATCTCTCTCTCTGTCTTTGTTTT
TGTTGATTTATTTGGGGATGGGGGATTGGGTTTGGGATTGAGATTGTTAT
GGTTTGTTTGTGTCTAAACTAAAGGGTATAATAGTGCGCCAGTCTACTCT
CCTGCTTCGTCCCCTTTTCGAAAAGCGCAACCAGGTTATCGCCGAGCCTG
ATGTGCGCGACACTTTCTGGACTCGCGTCATGCTCAATGCGCCCGCCGAG
GTGGAGGAATACATCACCATGACCGATGCCACGATCCTCGCTTCGACTCT
TAAGAACCTGACCGTTGAGCGATTCGAGATCGATGAGAAGGGTCAGGGCG
AGCCCCGCAGCTTCCGCTTGACCTTCGAGTTCCGCACCGGCGACGAGAAC
CCTTACTTTGAGAACGAGAAGCTTGTCAAGACCTTCTACTGGCGCAAGCA
GGTCATCACTACCCCCAAGGGTCACAAGCGCACCTGGGATGGTCTGGTCT
CCGAGCCCGTCCGCATCAACTGGAAGAAGGACCAGGATCCTACCAAGGGT
CTGCTGGACGCTGCTTGCGACCTTGCTGAGGCGGAGAAGAAGGGCGGAGA
CCGTAAGAAGCTGCCTGAGTTCGCCAAGGTCATTGAGAAGAAGGATGAGA
TTGAGGCTGCTGAGGACCAGGAGATGGGTGATGATGAGGATGAGCTCCCT
GAGGATGGCCCTGGCGGCATGAGCTTCTTCGCTTTCTTCGGCTACCGTGG
CAGCGATGTCACTGCTGAGCAGTCCCAGGCCGCGACCAAGGAGGATAACG
AGAGGTTTGAGAAGCTCCTCAAGGGCGAGCCTGTTGAGGGTGAGGATGAG
GAGGACGAGGATGACGAGGATGACGACATTGAGGATGAGTTCGATGACAT
TGAGGTCTTCCCTGGTGGTGAGGAGCTCGCTATTGCGATCGCTGAGGACC
TCTGGCCCAACGCCTTGAAGTACTATGGTGAGTGGTTTTCGTATATTGGA
TGAAGTCCGAGCTAACCTTCCTTCCAGTCACGGATCAGGCGATCGAGGAG
GTCGACTTTGACGACAGTGAGCTTGATATCTCGGGAGACGAGGAAGAGGA
CGAGAACGACCGTCCCCGCAAGAAGACCAAGGTCTAA
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Coding sequence (CDS) from alignment at ch1:1258661..1260247-

>KJC3_000580-T1 ID=KJC3_000580-T1|Name=KJC3_000580-T1|organism=Aspergillus niger KJC3|type=CDS|length=3231bp|location=Sequence derived from alignment at ch1:1258661..1260247- (Aspergillus niger KJC3)
TCACGGATCAGGCGATCGAGGAGGTCGACTTTGACGACAGTGAGCTTGAT
ATCTCGGGAGACGAGGAAGAGGACGAGAACGACCGTCCCCGCAAGAAGAC
CAAGGTCTAATGCGCCAGTCTACTCTCCTGCTTCGTCCCCTTTTCGAAAA
GCGCAACCAGGTTATCGCCGAGCCTGATGTGCGCGACACTTTCTGGACTC
GCGTCATGCTCAATGCGCCCGCCGAGGTGGAGGAATACATCACCATGACC
GATGCCACGATCCTCGCTTCGACTCTTAAGAACCTGACCGTTGAGCGATT
CGAGATCGATGAGAAGGGTCAGGGCGAGCCCCGCAGCTTCCGCTTGACCT
TCGAGTTCCGCACCGGCGACGAGAACCCTTACTTTGAGAACGAGAAGCTT
GTCAAGACCTTCTACTGGCGCAAGCAGGTCATCACTACCCCCAAGGGTCA
CAAGCGCACCTGGGATGGTCTGGTCTCCGAGCCCGTCCGCATCAACTGGA
AGAAGGACCAGGATCCTACCAAGGGTCTGCTGGACGCTGCTTGCGACCTT
GCTGAGGCGGAGAAGAAGGGCGGAGACCGTAAGAAGCTGCCTGAGTTCGC
CAAGGTCATTGAGAAGAAGGATGAGATTGAGGCTGCTGAGGACCAGGAGA
TGGGTGATGATGAGGATGAGCTCCCTGAGGATGGCCCTGGCGGCATGAGC
TTCTTCGCTTTCTTCGGCTACCGTGGCAGCGATGTCACTGCTGAGCAGTC
CCAGGCCGCGACCAAGGAGGATAACGAGAGGTTTGAGAAGCTCCTCAAGG
GCGAGCCTGTTGAGGGTGAGGATGAGGAGGACGAGGATGACGAGGATGAC
GACATTGAGGATGAGTTCGATGACATTGAGGTCTTCCCTGGTGGTGAGGA
GCTCGCTATTGCGATCGCTGAGGACCTCTGGCCCAACGCCTTGAAGTACT
ATGATGTCTGCTGAGGAAGCTAACACGTCGCTGTTGGAGCGCATTCAGCG
CCCCGAGGTGAGCAAGGAGACGGCGAAGAAGATTTCTTTGGTGGAGGAGC
AGTTTGCTAGGGCGGAGGTGGAGCAGTTCACGGATCAGGCGATCGAGGAG
GTCGACTTTGACGACAGTGAGCTTGATATCTCGGGAGACGAGGAAGAGGA
CGAGAACGACCGTCCCCGCAAGAAGACCAAGGTCTAATGCGCCAGTCTAC
TCTCCTGCTTCGTCCCCTTTTCGAAAAGCGCAACCAGGTTATCGCCGAGC
CTGATGTGCGCGACACTTTCTGGACTCGCGTCATGCTCAATGCGCCCGCC
GAGGTGGAGGAATACATCACCATGACCGATGCCACGATCCTCGCTTCGAC
TCTTAAGAACCTGACCGTTGAGCGATTCGAGATCGATGAGAAGGGTCAGG
GCGAGCCCCGCAGCTTCCGCTTGACCTTCGAGTTCCGCACCGGCGACGAG
AACCCTTACTTTGAGAACGAGAAGCTTGTCAAGACCTTCTACTGGCGCAA
GCAGGTCATCACTACCCCCAAGGGTCACAAGCGCACCTGGGATGGTCTGG
TCTCCGAGCCCGTCCGCATCAACTGGAAGAAGGACCAGGATCCTACCAAG
GGTCTGCTGGACGCTGCTTGCGACCTTGCTGAGGCGGAGAAGAAGGGCGG
AGACCGTAAGAAGCTGCCTGAGTTCGCCAAGGTCATTGAGAAGAAGGATG
AGATTGAGGCTGCTGAGGACCAGGAGATGGGTGATGATGAGGATGAGCTC
CCTGAGGATGGCCCTGGCGGCATGAGCTTCTTCGCTTTCTTCGGCTACCG
TGGCAGCGATGTCACTGCTGAGCAGTCCCAGGCCGCGACCAAGGAGGATA
ACGAGAGGTTTGAGAAGCTCCTCAAGGGCGAGCCTGTTGAGGGTGAGGAT
GAGGAGGACGAGGATGACGAGGATGACGACATTGAGGATGAGTTCGATGA
CATTGAGGTCTTCCCTGGTGGTGAGGAGCTCGCTATTGCGATCGCTGAGG
ACCTCTGGCCCAACGCCTTGAAGTACTATGATGTCTGCTGAGGAAGCTAA
CACGTCGCTGTTGGAGCGCATTCAGCGCCCCGAGGTGAGCAAGGAGACGG
CGAAGAAGATTTCTTTGGTGGAGGAGCAGTTTGCTAGGGCGGAGGTGGAG
CAGTTCACGGATCAGGCGATCGAGGAGGTCGACTTTGACGACAGTGAGCT
TGATATCTCGGGAGACGAGGAAGAGGACGAGAACGACCGTCCCCGCAAGA
AGACCAAGGTCTAATGCGCCAGTCTACTCTCCTGCTTCGTCCCCTTTTCG
AAAAGCGCAACCAGGTTATCGCCGAGCCTGATGTGCGCGACACTTTCTGG
ACTCGCGTCATGCTCAATGCGCCCGCCGAGGTGGAGGAATACATCACCAT
GACCGATGCCACGATCCTCGCTTCGACTCTTAAGAACCTGACCGTTGAGC
GATTCGAGATCGATGAGAAGGGTCAGGGCGAGCCCCGCAGCTTCCGCTTG
ACCTTCGAGTTCCGCACCGGCGACGAGAACCCTTACTTTGAGAACGAGAA
GCTTGTCAAGACCTTCTACTGGCGCAAGCAGGTCATCACTACCCCCAAGG
GTCACAAGCGCACCTGGGATGGTCTGGTCTCCGAGCCCGTCCGCATCAAC
TGGAAGAAGGACCAGGATCCTACCAAGGGTCTGCTGGACGCTGCTTGCGA
CCTTGCTGAGGCGGAGAAGAAGGGCGGAGACCGTAAGAAGCTGCCTGAGT
TCGCCAAGGTCATTGAGAAGAAGGATGAGATTGAGGCTGCTGAGGACCAG
GAGATGGGTGATGATGAGGATGAGCTCCCTGAGGATGGCCCTGGCGGCAT
GAGCTTCTTCGCTTTCTTCGGCTACCGTGGCAGCGATGTCACTGCTGAGC
AGTCCCAGGCCGCGACCAAGGAGGATAACGAGAGGTTTGAGAAGCTCCTC
AAGGGCGAGCCTGTTGAGGGTGAGGATGAGGAGGACGAGGATGACGAGGA
TGACGACATTGAGGATGAGTTCGATGACATTGAGGTCTTCCCTGGTGGTG
AGGAGCTCGCTATTGCGATCGCTGAGGACCTCTGGCCCAACGCCTTGAAG
TACTATGATGTCTGCTGAGGAAGCTAACACGTCGCTGTTGGAGCGCATTC
AGCGCCCCGAGGTGAGCAAGGAGACGGCGAAGAAGATTTCTTTGGTGGAG
GAGCAGTTTGCTAGGGCGGAGGTGGAGCAGT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006334nucleosome assembly
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_000580KJC3_000580Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000580-T1KJC3_000580-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000580-T1.cdsKJC3_000580-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000580-T1.exon3KJC3_000580-T1.exon3Aspergillus niger KJC3exon
KJC3_000580-T1.exon2KJC3_000580-T1.exon2Aspergillus niger KJC3exon
KJC3_000580-T1.exon1KJC3_000580-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000580-T1.utr5p1KJC3_000580-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR037231
DBxrefInterPro:IPR002164
DBxrefPFAM:PF00956
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:1258661..1260247 -
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