You are here

Home

KJC3_000582-T1, KJC3_000582-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_000582-T1
Unique NameKJC3_000582-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:1266779..1269374-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_000582-T1 ID=KJC3_000582-T1|Name=KJC3_000582-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2596bp|location=Sequence derived from alignment at ch1:1266779..1269374- (Aspergillus niger KJC3)
ATGCGGCGGCCGTGAATCGGAGACAATGTGGGTGGTGTCTCCAACTCTCA
ATCAAGTAGCCTATTTTTACAGGTCTAGTCTAGTTCTTAATGTTGTTCAT
ATGAGGGGCGAGGATCATGGGACGTCCACTGTTTTCTCCTGGTTCTTGAA
GCTGGTCCATAGTCCTTTTGCTAGGTAACGGCTAACCTTATCTTTGTGTG
CCCAACTCTCGACCCCGTTCTGCCCTGGAGTTGAAGACCTACTCAGTTTA
TTTCTACCGCAGAAAGGAGAGCTTATTCCCAGAGTTGCGAGCTCCACGAC
CCCAAAAAAAGATTTTTGTGGAGGCAGTTTCTTGGATAGATACTTTCCAG
CCTTGTTTGTGGCTGTTTCGCATCTGGAGCGGCCTGAAATCTGAGGCCCC
GCATTCTTTGCTTTCACAGCCAACTTCATCGTTGCTTTCTTTTGTTTTCT
CTTGCGCCTTGTCTACGCCATAGAATTAGAGATCATCGTCACAGCCCTCC
ATCATGGCAGCTCTCGATGTCAATGGTCCCTTGCCCGAGCTGTCTGAGCA
GCAGCCGGACGATCTCATCCCCGAGTCCCGGGTCCTCATTATCATGACTG
GTGGTACAATCTGTATGCGACAGTCCCCGTCAGGCTTCATTCCTGCCAGA
GGTTTCCAGGAGCAATGTCTGGCCCGGGTGCCGACATTCAACGATGGTTC
GCACCCGAGCATGATGGATGTTGTGATCAACTCAGACGGAGAGATCAAAG
GACATCCCGCTCTCCGCACACCACAGACAGCCTATGGGCGACGGGTGCGG
TACACTGTCTTCGAGTTCGAAGAGCTCCTCGATAGCAGTTCTATCGATGC
GAAAGGTTGGGCCCAGATCGCCCACACCGTTGAACGAAACTACACACTTT
TCGATGGCTTCGTCGTCCTCCACGGAACAGACAGTCTCGCATACACATGC
TCAGCGCTTAGCTTCATGCTGCAGAATCTCGGAAAGCCCGTGATTCTCAC
TGGAGCACAGGCGCCCATGCTGGAATTGCAGAATGATGCCACCGATAACC
TTCTCGGATCACTGGTCGTGGCTAGCCATTTCATGATTCCCGAAGTGTGC
CTGTACTTCAACAACCGACTGTTCCGTGGCAACCGGTCGATCAAGGTCGC
GGCCAGTGATTTCGCTGCCTTCGACTCTCCGAATTGCCCCCCGCTGGCGG
TGACAACCTCCATGCGGACCAACGTGAACTGGGAGCTGGTCAACCGACCG
AAGAGCCTCGAACATTTCCGTATCCAGACCAACCTCGACACCACCCACGT
GGCGTGTCTTCGTATCTTCCCTGGTATCAAGCCGGAGATGGTCGACGCCG
TGCTGAAGCTGGAAGGACTTCGTGGTTTAGTGTTGGAGACGTTTGGCGCC
GGTAACGCACCGAGTGGTCAAGACAATGCCATGACCAATGTGTTGGCCGC
CGCTATCAAGAGAGGAATCGTGATCGTGAATGTCACGCAATGTGAGTAAT
GAAACCCTTGCCAATAATCCCTCAAACCAGAATTCAATCTGACGCAACCA
ACCAACCAGGTCTGACGGGAAGTGTCAGCCCAGTCTATGCCCCAGGCATG
AGTCTCTCTCGCGCCGGAGTCGTCGCAGGACTCGACCTGACCACCGAAGC
TGCACTGACCAAGATGTCGTATCTTCTCGCTCTTCCCGATTCCACCCCAG
AATGGGTAGCCAAGAAAATGTCAGTATCTCTTCGCGGCGAATTGACCGAG
GTATCGCAGCCAGTCTTCCGCCACCCGGACGGGGCGCTCCCAGAGCGCGT
TCAGTCCCTCACGGTGCTCGGATACGCCATCGCGCAGGGTGATCTCGAGC
GCGTGGAGGAGATTGTGGCCCGAGAACACCAATGGTTATTGAATGACGCC
GATTATTCGGGCAACACACCTATCGTAAGGCAACCCCTTGAGCTGTATTT
GAGAAAAAGAAAAAGAAAAAGAAAAGCAAACTGACACCCACGTCACCTCA
CAGCACCTCGCAGCGACATCTCCCTCAATTGAGATTCTCCGATACCTGTT
GCTCCAGGGTGGCTCCGTGCACTTGCGAAACCGCAATGGTCGGACGCCGC
TGTTCCTGGCGGCCAACGCAGGATTCTCGGAGCACGTGCTGCTGCTACGC
AAGTCTGGAGCGCATCTGCACTCTGACGAACGCACGGCGGCGCAGTTGTT
GGCCCGGCGCCGACCTGGCGTCTGGGGGTTGGCGGGCATTGGGCCGCGCG
AGGTGAGTGAGCGCGAGATGGAGGAACTGGAGGACTCGAGTGTGTCTATA
GGACGTATGGCGCAGCGAGTGATGGCGGGATCGGCACCTTGACGATGGCG
ATCGGTTTGTTCTAGAGAAAGGAGCTTTGATGGTTTGTGGTCGTATTTTT
TTTTTCCTTTCTTTTTTTCTCGATTGCCTGTTTTAGACGGAAAAGCGTTG
TTGTTCTAGAGCTTTCATACTATGTGTGGCTCACACCACTAGGGTATCTC
ACAGTATACATGACGGAATGAGGGGTATGCCACCTTATGATGACCACCAA
TACAACTTCCACAAGGCGATCTCACTAGTATTAGACTTCTACTGCT
back to top

Coding sequence (CDS) from alignment at ch1:1266779..1269374-

>KJC3_000582-T1 ID=KJC3_000582-T1|Name=KJC3_000582-T1|organism=Aspergillus niger KJC3|type=CDS|length=5076bp|location=Sequence derived from alignment at ch1:1266779..1269374- (Aspergillus niger KJC3)
CACCTCGCAGCGACATCTCCCTCAATTGAGATTCTCCGATACCTGTTGCT
CCAGGGTGGCTCCGTGCACTTGCGAAACCGCAATGGTCGGACGCCGCTGT
TCCTGGCGGCCAACGCAGGATTCTCGGAGCACGTGCTGCTGCTACGCAAG
TCTGGAGCGCATCTGCACTCTGACGAACGCACGGCGGCGCAGTTGTTGGC
CCGGCGCCGACCTGGCGTCTGGGGGTTGGCGGGCATTGGGCCGCGCGAGG
TGAGTGAGCGCGAGATGGAGGAACTGGAGGACTCGAGTGTGTCTATAGGA
CGTATGGCGCAGCGAGTGATGGCGGGATCGGCACCTTGAGTCTGACGGGA
AGTGTCAGCCCAGTCTATGCCCCAGGCATGAGTCTCTCTCGCGCCGGAGT
CGTCGCAGGACTCGACCTGACCACCGAAGCTGCACTGACCAAGATGTCGT
ATCTTCTCGCTCTTCCCGATTCCACCCCAGAATGGGTAGCCAAGAAAATG
TCAGTATCTCTTCGCGGCGAATTGACCGAGGTATCGCAGCCAGTCTTCCG
CCACCCGGACGGGGCGCTCCCAGAGCGCGTTCAGTCCCTCACGGTGCTCG
GATACGCCATCGCGCAGGGTGATCTCGAGCGCGTGGAGGAGATTGTGGCC
CGAGAACACCAATGGTTATTGAATGACGCCGATTATTCGGGCAACACACC
TATCATGGCAGCTCTCGATGTCAATGGTCCCTTGCCCGAGCTGTCTGAGC
AGCAGCCGGACGATCTCATCCCCGAGTCCCGGGTCCTCATTATCATGACT
GGTGGTACAATCTGTATGCGACAGTCCCCGTCAGGCTTCATTCCTGCCAG
AGGTTTCCAGGAGCAATGTCTGGCCCGGGTGCCGACATTCAACGATGGTT
CGCACCCGAGCATGATGGATGTTGTGATCAACTCAGACGGAGAGATCAAA
GGACATCCCGCTCTCCGCACACCACAGACAGCCTATGGGCGACGGGTGCG
GTACACTGTCTTCGAGTTCGAAGAGCTCCTCGATAGCAGTTCTATCGATG
CGAAAGGTTGGGCCCAGATCGCCCACACCGTTGAACGAAACTACACACTT
TTCGATGGCTTCGTCGTCCTCCACGGAACAGACAGTCTCGCATACACATG
CTCAGCGCTTAGCTTCATGCTGCAGAATCTCGGAAAGCCCGTGATTCTCA
CTGGAGCACAGGCGCCCATGCTGGAATTGCAGAATGATGCCACCGATAAC
CTTCTCGGATCACTGGTCGTGGCTAGCCATTTCATGATTCCCGAAGTGTG
CCTGTACTTCAACAACCGACTGTTCCGTGGCAACCGGTCGATCAAGGTCG
CGGCCAGTGATTTCGCTGCCTTCGACTCTCCGAATTGCCCCCCGCTGGCG
GTGACAACCTCCATGCGGACCAACGTGAACTGGGAGCTGGTCAACCGACC
GAAGAGCCTCGAACATTTCCGTATCCAGACCAACCTCGACACCACCCACG
TGGCGTGTCTTCGTATCTTCCCTGGTATCAAGCCGGAGATGGTCGACGCC
GTGCTGAAGCTGGAAGGACTTCGTGGTTTAGTGTTGGAGACGTTTGGCGC
CGGTAACGCACCGAGTGGTCAAGACAATGCCATGACCAATGTGTTGGCCG
CCGCTATCAAGAGAGGAATCGTGATCGTGAATGTCACGCAATCACCTCGC
AGCGACATCTCCCTCAATTGAGATTCTCCGATACCTGTTGCTCCAGGGTG
GCTCCGTGCACTTGCGAAACCGCAATGGTCGGACGCCGCTGTTCCTGGCG
GCCAACGCAGGATTCTCGGAGCACGTGCTGCTGCTACGCAAGTCTGGAGC
GCATCTGCACTCTGACGAACGCACGGCGGCGCAGTTGTTGGCCCGGCGCC
GACCTGGCGTCTGGGGGTTGGCGGGCATTGGGCCGCGCGAGGTGAGTGAG
CGCGAGATGGAGGAACTGGAGGACTCGAGTGTGTCTATAGGACGTATGGC
GCAGCGAGTGATGGCGGGATCGGCACCTTGAGTCTGACGGGAAGTGTCAG
CCCAGTCTATGCCCCAGGCATGAGTCTCTCTCGCGCCGGAGTCGTCGCAG
GACTCGACCTGACCACCGAAGCTGCACTGACCAAGATGTCGTATCTTCTC
GCTCTTCCCGATTCCACCCCAGAATGGGTAGCCAAGAAAATGTCAGTATC
TCTTCGCGGCGAATTGACCGAGGTATCGCAGCCAGTCTTCCGCCACCCGG
ACGGGGCGCTCCCAGAGCGCGTTCAGTCCCTCACGGTGCTCGGATACGCC
ATCGCGCAGGGTGATCTCGAGCGCGTGGAGGAGATTGTGGCCCGAGAACA
CCAATGGTTATTGAATGACGCCGATTATTCGGGCAACACACCTATCATGG
CAGCTCTCGATGTCAATGGTCCCTTGCCCGAGCTGTCTGAGCAGCAGCCG
GACGATCTCATCCCCGAGTCCCGGGTCCTCATTATCATGACTGGTGGTAC
AATCTGTATGCGACAGTCCCCGTCAGGCTTCATTCCTGCCAGAGGTTTCC
AGGAGCAATGTCTGGCCCGGGTGCCGACATTCAACGATGGTTCGCACCCG
AGCATGATGGATGTTGTGATCAACTCAGACGGAGAGATCAAAGGACATCC
CGCTCTCCGCACACCACAGACAGCCTATGGGCGACGGGTGCGGTACACTG
TCTTCGAGTTCGAAGAGCTCCTCGATAGCAGTTCTATCGATGCGAAAGGT
TGGGCCCAGATCGCCCACACCGTTGAACGAAACTACACACTTTTCGATGG
CTTCGTCGTCCTCCACGGAACAGACAGTCTCGCATACACATGCTCAGCGC
TTAGCTTCATGCTGCAGAATCTCGGAAAGCCCGTGATTCTCACTGGAGCA
CAGGCGCCCATGCTGGAATTGCAGAATGATGCCACCGATAACCTTCTCGG
ATCACTGGTCGTGGCTAGCCATTTCATGATTCCCGAAGTGTGCCTGTACT
TCAACAACCGACTGTTCCGTGGCAACCGGTCGATCAAGGTCGCGGCCAGT
GATTTCGCTGCCTTCGACTCTCCGAATTGCCCCCCGCTGGCGGTGACAAC
CTCCATGCGGACCAACGTGAACTGGGAGCTGGTCAACCGACCGAAGAGCC
TCGAACATTTCCGTATCCAGACCAACCTCGACACCACCCACGTGGCGTGT
CTTCGTATCTTCCCTGGTATCAAGCCGGAGATGGTCGACGCCGTGCTGAA
GCTGGAAGGACTTCGTGGTTTAGTGTTGGAGACGTTTGGCGCCGGTAACG
CACCGAGTGGTCAAGACAATGCCATGACCAATGTGTTGGCCGCCGCTATC
AAGAGAGGAATCGTGATCGTGAATGTCACGCAATCACCTCGCAGCGACAT
CTCCCTCAATTGAGATTCTCCGATACCTGTTGCTCCAGGGTGGCTCCGTG
CACTTGCGAAACCGCAATGGTCGGACGCCGCTGTTCCTGGCGGCCAACGC
AGGATTCTCGGAGCACGTGCTGCTGCTACGCAAGTCTGGAGCGCATCTGC
ACTCTGACGAACGCACGGCGGCGCAGTTGTTGGCCCGGCGCCGACCTGGC
GTCTGGGGGTTGGCGGGCATTGGGCCGCGCGAGGTGAGTGAGCGCGAGAT
GGAGGAACTGGAGGACTCGAGTGTGTCTATAGGACGTATGGCGCAGCGAG
TGATGGCGGGATCGGCACCTTGAGTCTGACGGGAAGTGTCAGCCCAGTCT
ATGCCCCAGGCATGAGTCTCTCTCGCGCCGGAGTCGTCGCAGGACTCGAC
CTGACCACCGAAGCTGCACTGACCAAGATGTCGTATCTTCTCGCTCTTCC
CGATTCCACCCCAGAATGGGTAGCCAAGAAAATGTCAGTATCTCTTCGCG
GCGAATTGACCGAGGTATCGCAGCCAGTCTTCCGCCACCCGGACGGGGCG
CTCCCAGAGCGCGTTCAGTCCCTCACGGTGCTCGGATACGCCATCGCGCA
GGGTGATCTCGAGCGCGTGGAGGAGATTGTGGCCCGAGAACACCAATGGT
TATTGAATGACGCCGATTATTCGGGCAACACACCTATCATGGCAGCTCTC
GATGTCAATGGTCCCTTGCCCGAGCTGTCTGAGCAGCAGCCGGACGATCT
CATCCCCGAGTCCCGGGTCCTCATTATCATGACTGGTGGTACAATCTGTA
TGCGACAGTCCCCGTCAGGCTTCATTCCTGCCAGAGGTTTCCAGGAGCAA
TGTCTGGCCCGGGTGCCGACATTCAACGATGGTTCGCACCCGAGCATGAT
GGATGTTGTGATCAACTCAGACGGAGAGATCAAAGGACATCCCGCTCTCC
GCACACCACAGACAGCCTATGGGCGACGGGTGCGGTACACTGTCTTCGAG
TTCGAAGAGCTCCTCGATAGCAGTTCTATCGATGCGAAAGGTTGGGCCCA
GATCGCCCACACCGTTGAACGAAACTACACACTTTTCGATGGCTTCGTCG
TCCTCCACGGAACAGACAGTCTCGCATACACATGCTCAGCGCTTAGCTTC
ATGCTGCAGAATCTCGGAAAGCCCGTGATTCTCACTGGAGCACAGGCGCC
CATGCTGGAATTGCAGAATGATGCCACCGATAACCTTCTCGGATCACTGG
TCGTGGCTAGCCATTTCATGATTCCCGAAGTGTGCCTGTACTTCAACAAC
CGACTGTTCCGTGGCAACCGGTCGATCAAGGTCGCGGCCAGTGATTTCGC
TGCCTTCGACTCTCCGAATTGCCCCCCGCTGGCGGTGACAACCTCCATGC
GGACCAACGTGAACTGGGAGCTGGTCAACCGACCGAAGAGCCTCGAACAT
TTCCGTATCCAGACCAACCTCGACACCACCCACGTGGCGTGTCTTCGTAT
CTTCCCTGGTATCAAGCCGGAGATGGTCGACGCCGTGCTGAAGCTGGAAG
GACTTCGTGGTTTAGTGTTGGAGACGTTTGGCGCCGGTAACGCACCGAGT
GGTCAAGACAATGCCATGACCAATGTGTTGGCCGCCGCTATCAAGAGAGG
AATCGTGATCGTGAATGTCACGCAAT
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_000582KJC3_000582Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000582-T1KJC3_000582-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000582-T1.cdsKJC3_000582-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000582-T1.utr3p1KJC3_000582-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000582-T1.exon3KJC3_000582-T1.exon3Aspergillus niger KJC3exon
KJC3_000582-T1.exon2KJC3_000582-T1.exon2Aspergillus niger KJC3exon
KJC3_000582-T1.exon1KJC3_000582-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000582-T1.utr5p1KJC3_000582-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036152
DBxrefInterPro:IPR041725
DBxrefInterPro:IPR040919
DBxrefInterPro:IPR020683
DBxrefInterPro:IPR027473
DBxrefInterPro:IPR027474
DBxrefInterPro:IPR037152
DBxrefInterPro:IPR036770
DBxrefInterPro:IPR002110
DBxrefInterPro:IPR006034
DBxrefPFAM:PF17763
DBxrefPFAM:PF00710
DBxrefPFAM:PF13857
DBxrefPFAM:PF13637
DBxrefPFAM:PF13606
DBxrefPFAM:PF12796
DBxrefPFAM:PF00023
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:1266779..1269374 -
Powered by Drupal