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KJC3_000582-T2, KJC3_000582-T2 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_000582-T2
Unique NameKJC3_000582-T2
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:1266779..1269374-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_000582-T2 ID=KJC3_000582-T2|Name=KJC3_000582-T2|organism=Aspergillus niger KJC3|type=mRNA|length=2596bp|location=Sequence derived from alignment at ch1:1266779..1269374- (Aspergillus niger KJC3)
ATGCGGCGGCCGTGAATCGGAGACAATGTGGGTGGTGTCTCCAACTCTCA
ATCAAGTAGCCTATTTTTACAGGTCTAGTCTAGTTCTTAATGTTGTTCAT
ATGAGGGGCGAGGATCATGGGACGTCCACTGTTTTCTCCTGGTTCTTGAA
GCTGGTCCATAGTCCTTTTGCTAGGTAACGGCTAACCTTATCTTTGTGTG
CCCAACTCTCGACCCCGTTCTGCCCTGGAGTTGAAGACCTACTCAGTTTA
TTTCTACCGCAGAAAGGAGAGCTTATTCCCAGAGTTGCGAGCTCCACGAC
CCCAAAAAAAGATTTTTGTGGAGGCAGTTTCTTGGATAGATACTTTCCAG
CCTTGTTTGTGGCTGTTTCGCATCTGGAGCGGCCTGAAATCTGAGGCCCC
GCATTCTTTGCTTTCACAGCCAACTTCATCGTTGCTTTCTTTTGTTTTCT
CTTGCGCCTTGTCTACGCCATAGAATTAGAGATCATCGTCACAGCCCTCC
ATCATGGCAGCTCTCGATGTCAATGGTCCCTTGCCCGAGCTGTCTGAGCA
GCAGCCGGACGATCTCATCCCCGAGTCCCGGGTCCTCATTATCATGACTG
GTGGTACAATCTGTATGCGACAGTCCCCGTCAGGCTTCATTCCTGCCAGA
GGTTTCCAGGAGCAATGTCTGGCCCGGGTGCCGACATTCAACGATGGTTC
GCACCCGAGCATGATGGATGTTGTGATCAACTCAGACGGAGAGATCAAAG
GACATCCCGCTCTCCGCACACCACAGACAGCCTATGGGCGACGGGTGCGG
TACACTGTCTTCGAGTTCGAAGAGCTCCTCGATAGCAGTTCTATCGATGC
GAAAGGTTGGGCCCAGATCGCCCACACCGTTGAACGAAACTACACACTTT
TCGATGGCTTCGTCGTCCTCCACGGAACAGACAGTCTCGCATACACATGC
TCAGCGCTTAGCTTCATGCTGCAGAATCTCGGAAAGCCCGTGATTCTCAC
TGGAGCACAGGCGCCCATGCTGGAATTGCAGAATGATGCCACCGATAACC
TTCTCGGATCACTGGTCGTGGCTAGCCATTTCATGATTCCCGAAGTGTGC
CTGTACTTCAACAACCGACTGTTCCGTGGCAACCGGTCGATCAAGGTCGC
GGCCAGTGATTTCGCTGCCTTCGACTCTCCGAATTGCCCCCCGCTGGCGG
TGACAACCTCCATGCGGACCAACGTGAACTGGGAGCTGGTCAACCGACCG
AAGAGCCTCGAACATTTCCGTATCCAGACCAACCTCGACACCACCCACGT
GGCGTGTCTTCGTATCTTCCCTGGTATCAAGCCGGAGATGGTCGACGCCG
TGCTGAAGCTGGAAGGACTTCGTGGTTTAGTGTTGGAGACGTTTGGCGCC
GGTAACGCACCGAGTGGTCAAGACAATGCCATGACCAATGTGTTGGCCGC
CGCTATCAAGAGAGGAATCGTGATCGTGAATGTCACGCAATGTGAGTAAT
GAAACCCTTGCCAATAATCCCTCAAACCAGAATTCAATCTGACGCAACCA
ACCAACCAGGTCTGACGGGAAGTGTCAGCCCAGTCTATGCCCCAGGCATG
AGTCTCTCTCGCGCCGGAGTCGTCGCAGGACTCGACCTGACCACCGAAGC
TGCACTGACCAAGATGTCGTATCTTCTCGCTCTTCCCGATTCCACCCCAG
AATGGGTAGCCAAGAAAATGTCAGTATCTCTTCGCGGCGAATTGACCGAG
GTATCGCAGCCAGTCTTCCGCCACCCGGACGGGGCGCTCCCAGAGCGCGT
TCAGTCCCTCACGGTGCTCGGATACGCCATCGCGCAGGGTGATCTCGAGC
GCGTGGAGGAGATTGTGGCCCGAGAACACCAATGGTTATTGAATGACGCC
GATTATTCGGGCAACACACCTATCGTAAGGCAACCCCTTGAGCTGTATTT
GAGAAAAAGAAAAAGAAAAAGAAAAGCAAACTGACACCCACGTCACCTCA
CAGCACCTCGCAGCGACATCTCCCTCAATTGAGATTCTCCGATACCTGTT
GCTCCAGGGTGGCTCCGTGCACTTGCGAAACCGCAATGGTCGGACGCCGC
TGTTCCTGGCGGCCAACGCAGGATTCTCGGAGCACGTGCTGCTGCTACGC
AAGTCTGGAGCGCATCTGCACTCTGACGAACGCACGGCGGCGCAGTTGTT
GGCCCGGCGCCGACCTGGCGTCTGGGGGTTGGCGGGCATTGGGCCGCGCG
AGGTGAGTGAGCGCGAGATGGAGGAACTGGAGGACTCGAGTGTGTCTATA
GGACGTATGGCGCAGCGAGTGATGGCGGGATCGGCACCTTGACGATGGCG
ATCGGTTTGTTCTAGAGAAAGGAGCTTTGATGGTTTGTGGTCGTATTTTT
TTTTTCCTTTCTTTTTTTCTCGATTGCCTGTTTTAGACGGAAAAGCGTTG
TTGTTCTAGAGCTTTCATACTATGTGTGGCTCACACCACTAGGGTATCTC
ACAGTATACATGACGGAATGAGGGGTATGCCACCTTATGATGACCACCAA
TACAACTTCCACAAGGCGATCTCACTAGTATTAGACTTCTACTGCT
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Coding sequence (CDS) from alignment at ch1:1266779..1269374-

>KJC3_000582-T2 ID=KJC3_000582-T2|Name=KJC3_000582-T2|organism=Aspergillus niger KJC3|type=CDS|length=2826bp|location=Sequence derived from alignment at ch1:1266779..1269374- (Aspergillus niger KJC3)
GTCTGACGGGAAGTGTCAGCCCAGTCTATGCCCCAGGCATGAGTCTCTCT
CGCGCCGGAGTCGTCGCAGGACTCGACCTGACCACCGAAGCTGCACTGAC
CAAGATGTCGTATCTTCTCGCTCTTCCCGATTCCACCCCAGAATGGGTAG
CCAAGAAAATGTCAGTATCTCTTCGCGGCGAATTGACCGAGGTATCGCAG
CCAGTCTTCCGCCACCCGGACGGGGCGCTCCCAGAGCGCGTTCAGTCCCT
CACGGTGCTCGGATACGCCATCGCGCAGGGTGATCTCGAGCGCGTGGAGG
AGATTGTGGCCCGAGAACACCAATGGTTATTGAATGACGCCGATTATTCG
GGCAACACACCTATCGTAAGGCAACCCCTTGAGCTGTATTTGAGAAAAAG
AAAAAGAAAAAGAAAAGCAAACTGAATGGCAGCTCTCGATGTCAATGGTC
CCTTGCCCGAGCTGTCTGAGCAGCAGCCGGACGATCTCATCCCCGAGTCC
CGGGTCCTCATTATCATGACTGGTGGTACAATCTGTATGCGACAGTCCCC
GTCAGGCTTCATTCCTGCCAGAGGTTTCCAGGAGCAATGTCTGGCCCGGG
TGCCGACATTCAACGATGGTTCGCACCCGAGCATGATGGATGTTGTGATC
AACTCAGACGGAGAGATCAAAGGACATCCCGCTCTCCGCACACCACAGAC
AGCCTATGGGCGACGGGTGCGGTACACTGTCTTCGAGTTCGAAGAGCTCC
TCGATAGCAGTTCTATCGATGCGAAAGGTTGGGCCCAGATCGCCCACACC
GTTGAACGAAACTACACACTTTTCGATGGCTTCGTCGTCCTCCACGGAAC
AGACAGTCTCGCATACACATGCTCAGCGCTTAGCTTCATGCTGCAGAATC
TCGGAAAGCCCGTGATTCTCACTGGAGCACAGGCGCCCATGCTGGAATTG
CAGAATGATGCCACCGATAACCTTCTCGGATCACTGGTCGTGGCTAGCCA
TTTCATGATTCCCGAAGTGTGCCTGTACTTCAACAACCGACTGTTCCGTG
GCAACCGGTCGATCAAGGTCGCGGCCAGTGATTTCGCTGCCTTCGACTCT
CCGAATTGCCCCCCGCTGGCGGTGACAACCTCCATGCGGACCAACGTGAA
CTGGGAGCTGGTCAACCGACCGAAGAGCCTCGAACATTTCCGTATCCAGA
CCAACCTCGACACCACCCACGTGGCGTGTCTTCGTATCTTCCCTGGTATC
AAGCCGGAGATGGTCGACGCCGTGCTGAAGCTGGAAGGACTTCGTGGTTT
AGTGTTGGAGACGTTTGGCGCCGGTAACGCACCGAGTGGTCAAGACAATG
CCATGACCAATGTGTTGGCCGCCGCTATCAAGAGAGGAATCGTGATCGTG
AATGTCACGCAATGTCTGACGGGAAGTGTCAGCCCAGTCTATGCCCCAGG
CATGAGTCTCTCTCGCGCCGGAGTCGTCGCAGGACTCGACCTGACCACCG
AAGCTGCACTGACCAAGATGTCGTATCTTCTCGCTCTTCCCGATTCCACC
CCAGAATGGGTAGCCAAGAAAATGTCAGTATCTCTTCGCGGCGAATTGAC
CGAGGTATCGCAGCCAGTCTTCCGCCACCCGGACGGGGCGCTCCCAGAGC
GCGTTCAGTCCCTCACGGTGCTCGGATACGCCATCGCGCAGGGTGATCTC
GAGCGCGTGGAGGAGATTGTGGCCCGAGAACACCAATGGTTATTGAATGA
CGCCGATTATTCGGGCAACACACCTATCGTAAGGCAACCCCTTGAGCTGT
ATTTGAGAAAAAGAAAAAGAAAAAGAAAAGCAAACTGAATGGCAGCTCTC
GATGTCAATGGTCCCTTGCCCGAGCTGTCTGAGCAGCAGCCGGACGATCT
CATCCCCGAGTCCCGGGTCCTCATTATCATGACTGGTGGTACAATCTGTA
TGCGACAGTCCCCGTCAGGCTTCATTCCTGCCAGAGGTTTCCAGGAGCAA
TGTCTGGCCCGGGTGCCGACATTCAACGATGGTTCGCACCCGAGCATGAT
GGATGTTGTGATCAACTCAGACGGAGAGATCAAAGGACATCCCGCTCTCC
GCACACCACAGACAGCCTATGGGCGACGGGTGCGGTACACTGTCTTCGAG
TTCGAAGAGCTCCTCGATAGCAGTTCTATCGATGCGAAAGGTTGGGCCCA
GATCGCCCACACCGTTGAACGAAACTACACACTTTTCGATGGCTTCGTCG
TCCTCCACGGAACAGACAGTCTCGCATACACATGCTCAGCGCTTAGCTTC
ATGCTGCAGAATCTCGGAAAGCCCGTGATTCTCACTGGAGCACAGGCGCC
CATGCTGGAATTGCAGAATGATGCCACCGATAACCTTCTCGGATCACTGG
TCGTGGCTAGCCATTTCATGATTCCCGAAGTGTGCCTGTACTTCAACAAC
CGACTGTTCCGTGGCAACCGGTCGATCAAGGTCGCGGCCAGTGATTTCGC
TGCCTTCGACTCTCCGAATTGCCCCCCGCTGGCGGTGACAACCTCCATGC
GGACCAACGTGAACTGGGAGCTGGTCAACCGACCGAAGAGCCTCGAACAT
TTCCGTATCCAGACCAACCTCGACACCACCCACGTGGCGTGTCTTCGTAT
CTTCCCTGGTATCAAGCCGGAGATGGTCGACGCCGTGCTGAAGCTGGAAG
GACTTCGTGGTTTAGTGTTGGAGACGTTTGGCGCCGGTAACGCACCGAGT
GGTCAAGACAATGCCATGACCAATGTGTTGGCCGCCGCTATCAAGAGAGG
AATCGTGATCGTGAATGTCACGCAAT
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_000582KJC3_000582Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000582-T2KJC3_000582-T2-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000582-T2.cdsKJC3_000582-T2.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000582-T2.utr3p1KJC3_000582-T2.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000582-T2.exon2KJC3_000582-T2.exon2Aspergillus niger KJC3exon
KJC3_000582-T2.exon1KJC3_000582-T2.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000582-T2.utr5p1KJC3_000582-T2.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036152
DBxrefInterPro:IPR041725
DBxrefInterPro:IPR027474
DBxrefInterPro:IPR040919
DBxrefInterPro:IPR027473
DBxrefInterPro:IPR037152
DBxrefInterPro:IPR006034
DBxrefPFAM:PF17763
DBxrefPFAM:PF00710
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:1266779..1269374 -
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