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KJC3_000583-T1, KJC3_000583-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_000583-T1
Unique NameKJC3_000583-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:1271455..1272640-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_000583-T1 ID=KJC3_000583-T1|Name=KJC3_000583-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1186bp|location=Sequence derived from alignment at ch1:1271455..1272640- (Aspergillus niger KJC3)
ATGGATGGAGTGGGAATTTGCTGGATGGACCCCTTAGTCAGTCTTACCCC
ATGCTTACTTACCCATCCGCGCCCCGCCCGAGCCAATCCCGGATCACCGG
CCAGGAGTATAAAGTCGATCTGCGATCTAGACAAACGACGAAATACTTTC
TCCAGAATGCAAATTGCAACACCATCCTATCTCTTCCTATTCTTTGTTCC
TTTAATACTGCTCCTCATCAAGGCAATTCTTCCCACCAACTCCGTTATGT
CCAAGCCTCTTGCACACGCTTCCATTGTCGCCCGTCGCTCCAGTGAGCGC
GGGTACGCCGAACACGGCGGCTGGCTCAAAAGCTTTCACACCTTCAGTTT
TGCCAACTACTATGATCATCGCTTCAACAACTTTGGCAGTCTGCGCGTTC
TCAACGAAGACCGTGTAGCCGCCCGTAATGGATTCCCGACCCACCCTCAC
CGTGATGCCGAAATCTTCAGCTACATTCTCAACGGAGAACTCACGCACCG
TGATAGCATGATCAAAAAGGGTGCGGAAGGCGCACAGGGCAAGCAATTTT
ACCGTATGAAGCGTGGTGACGTTCAGTTCACCACTGGTGGAACAGGTAAG
TTGACTAGCATTGGACTCCATCACCATCAAATCGAAGATGACCAAACTAA
CCAACCAATTCACTCCAGGAATCGCACACTCCGAACAAAACGAATCCAAC
AAGCCTGTCCACTTCCTCCAGATCTGGGCTCTTCCCTGGAAACATGGCCT
CAAGCCCCAATACCACACCCGCACGTTCGACGAAGCCGCTAAACGCAAAG
CATTCGTCCCTATCCTCTCCCCGCTGGCTGCTGGGCCCGAAGCAACCCCG
GCTGATGAGGAAGCCGCCATTCCTAAGATCCCAGACACGATCCCAATTCA
CGCAGACTTTGTGATGGGCGCGGGAATCATTGAACCCGGGCAGAAGTTCC
AGTGGACTGTTGGTGCTGGCGAAGACGTGGTCAGCCGGAAGAAGAAGAGG
AACGTCTATGTGCATTTGCCCATGACGAAGAACGGCCAGGCCAAGATCCG
ATTGGATCATCGGGACGAAGCGGTTTTCAGTGAGGGCGATGGAGCGTTTA
TCACAGGGGTGAATGCGGGTGATGTGCTGAGTGTGGAGAGTGTTGGAGAT
GCTGAGGCCGAGGTTGTGGTTTTGGACAGTGACTAG
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Coding sequence (CDS) from alignment at ch1:1271455..1272640-

>KJC3_000583-T1 ID=KJC3_000583-T1|Name=KJC3_000583-T1|organism=Aspergillus niger KJC3|type=CDS|length=2226bp|location=Sequence derived from alignment at ch1:1271455..1272640- (Aspergillus niger KJC3)
GAATCGCACACTCCGAACAAAACGAATCCAACAAGCCTGTCCACTTCCTC
CAGATCTGGGCTCTTCCCTGGAAACATGGCCTCAAGCCCCAATACCACAC
CCGCACGTTCGACGAAGCCGCTAAACGCAAAGCATTCGTCCCTATCCTCT
CCCCGCTGGCTGCTGGGCCCGAAGCAACCCCGGCTGATGAGGAAGCCGCC
ATTCCTAAGATCCCAGACACGATCCCAATTCACGCAGACTTTGTGATGGG
CGCGGGAATCATTGAACCCGGGCAGAAGTTCCAGTGGACTGTTGGTGCTG
GCGAAGACGTGGTCAGCCGGAAGAAGAAGAGGAACGTCTATGTGCATTTG
CCCATGACGAAGAACGGCCAGGCCAAGATCCGATTGGATCATCGGGACGA
AGCGGTTTTCAGTGAGGGCGATGGAGCGTTTATCACAGGGGTGAATGCGG
GTGATGTGCTGAGTGTGGAGAGTGTTGGAGATGCTGAGGCCGAGGTTGTG
GTTTTGGACAGTGACTAGATGGATGGAGTGGGAATTTGCTGGATGGACCC
CTTAGTCAGTCTTACCCCATGCTTACTTACCCATCCGCGCCCCGCCCGAG
CCAATCCCGGATCACCGGCCAGGAGTATAAAGTCGATCTGCGATCTAGAC
AAACGACGAAATACTTTCTCCAGAATGCAAATTGCAACACCATCCTATCT
CTTCCTATTCTTTGTTCCTTTAATACTGCTCCTCATCAAGGCAATTCTTC
CCACCAACTCCGTTATGTCCAAGCCTCTTGCACACGCTTCCATTGTCGCC
CGTCGCTCCAGTGAGCGCGGGTACGCCGAACACGGCGGCTGGCTCAAAAG
CTTTCACACCTTCAGTTTTGCCAACTACTATGATCATCGCTTCAACAACT
TTGGCAGTCTGCGCGTTCTCAACGAAGACCGTGTAGCCGCCCGTAATGGA
TTCCCGACCCACCCTCACCGTGATGCCGAAATCTTCAGCTACATTCTCAA
CGGAGAACTCACGCACCGTGATAGCATGATCAAAAAGGGTGCGGAAGGCG
CACAGGGCAAGCAATTTTACCGTATGAAGCGTGGTGACGTTCAGTTCACC
ACTGGTGGAACAGGAATCGCACACTCCGAACAAAACGAATCCAACAAGCC
TGTCCACTTCCTCCAGATCTGGGCTCTTCCCTGGAAACATGGCCTCAAGC
CCCAATACCACACCCGCACGTTCGACGAAGCCGCTAAACGCAAAGCATTC
GTCCCTATCCTCTCCCCGCTGGCTGCTGGGCCCGAAGCAACCCCGGCTGA
TGAGGAAGCCGCCATTCCTAAGATCCCAGACACGATCCCAATTCACGCAG
ACTTTGTGATGGGCGCGGGAATCATTGAACCCGGGCAGAAGTTCCAGTGG
ACTGTTGGTGCTGGCGAAGACGTGGTCAGCCGGAAGAAGAAGAGGAACGT
CTATGTGCATTTGCCCATGACGAAGAACGGCCAGGCCAAGATCCGATTGG
ATCATCGGGACGAAGCGGTTTTCAGTGAGGGCGATGGAGCGTTTATCACA
GGGGTGAATGCGGGTGATGTGCTGAGTGTGGAGAGTGTTGGAGATGCTGA
GGCCGAGGTTGTGGTTTTGGACAGTGACTAGATGGATGGAGTGGGAATTT
GCTGGATGGACCCCTTAGTCAGTCTTACCCCATGCTTACTTACCCATCCG
CGCCCCGCCCGAGCCAATCCCGGATCACCGGCCAGGAGTATAAAGTCGAT
CTGCGATCTAGACAAACGACGAAATACTTTCTCCAGAATGCAAATTGCAA
CACCATCCTATCTCTTCCTATTCTTTGTTCCTTTAATACTGCTCCTCATC
AAGGCAATTCTTCCCACCAACTCCGTTATGTCCAAGCCTCTTGCACACGC
TTCCATTGTCGCCCGTCGCTCCAGTGAGCGCGGGTACGCCGAACACGGCG
GCTGGCTCAAAAGCTTTCACACCTTCAGTTTTGCCAACTACTATGATCAT
CGCTTCAACAACTTTGGCAGTCTGCGCGTTCTCAACGAAGACCGTGTAGC
CGCCCGTAATGGATTCCCGACCCACCCTCACCGTGATGCCGAAATCTTCA
GCTACATTCTCAACGGAGAACTCACGCACCGTGATAGCATGATCAAAAAG
GGTGCGGAAGGCGCACAGGGCAAGCAATTTTACCGTATGAAGCGTGGTGA
CGTTCAGTTCACCACTGGTGGAACAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_000583KJC3_000583Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000583-T1KJC3_000583-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000583-T1.cdsKJC3_000583-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000583-T1.exon2KJC3_000583-T1.exon2Aspergillus niger KJC3exon
KJC3_000583-T1.exon1KJC3_000583-T1.exon1Aspergillus niger KJC3exon


Properties
Property NameValue
DBxrefInterPro:IPR011051
DBxrefInterPro:IPR014710
DBxrefInterPro:IPR003829
DBxrefPFAM:PF02678
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:1271455..1272640 -
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