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KJC3_000584-T1, KJC3_000584-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_000584-T1
Unique NameKJC3_000584-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:1272914..1274659-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_000584-T1 ID=KJC3_000584-T1|Name=KJC3_000584-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1746bp|location=Sequence derived from alignment at ch1:1272914..1274659- (Aspergillus niger KJC3)
ATGGAATCCGAGAAGAAGCGCCGTGCGAGCAAACCTAAAGTCAAAACAGG
CTGTCGGACATGCAAGTGAGTTGGGCGGCTGCCTTGTTACACAAGTTGGT
GTGGTGCTTATTCTATACACAGAATTCGTCGAGTCAAATGCGACGAGGGT
CGACCGGCTTGCAAGAGATGCGTATCAACTGGCCGAGTCTGCGATGGCTA
TGGGGTTTGGAGTGAAGCGAAAAAGCCCACCGTCGACGGCAATACTGGCG
CACCAAGAGCCTTCCAGAGTCTGCTGTCTAGTTACAATGCACCGGTCCCA
ATTCCTCATGCCGCATGTGCTGAGCGGAAATATGTGGAATGGTTCATCCA
GTGTACCATTTTCAAAATTGGAGGAGTGTTTTCTTCCCAATTCTGGGGCA
GAACCGTTGTTCAAGCACTTTCTCAAGAGCTAGCAGTACGGCATGCTGTT
TTGGCATTGGCCTCTACGCATAAATATAGGACTCAGAGGAGTGTTAGAGG
TACTGCAACGGCAGGTCATCTAAGCGAGCATGAGAAATTCACTCTCCAGC
ACTACAACAAAGCGATTGGCTGTCTCCAAGCTGAAATAAGACGCAACAAT
AAACGAACGCAGAGTATGATAGTTGCCCTCATTACTTGCATGGTTTTCGT
GACTCTCGAAATGATGCGAGGCCAATACCGAACAAGTCATACTCATCTAC
AGCACGGGCTGAAGCTGGTGAAGGAGATTCAGAGGCTCTCCGGAGCCCCT
AAGACCGGAAGAATTCGGATAAGGACTTCGTCACAAACAAATGAGGATGA
TGTTATCGAGGTCTTTAGCAGACTGGAAGTGCACTATGCTCTACTTGGAC
ATGGGACGAAGTACTCGAACCTTGACTATGACGTTCAACCTCGTCACTTA
CCGTACAGATTTCCATCAATTGAACAAGCAAGGCAATATCTGGATGTTCT
GCTGGCAAGAGCACAGGGTCTGGTGGAAATGGGGCGTCACATCGAGACGG
ACATGTTTGTTGCGACTCAGGGCTACCAGCAGTTTCTCGAGTCTCAATGG
CACCTGGAAAAGGACTTGGAAGTATGGCTTGATGTTTATCGATCGTCACT
TGGTAAATTCTCAGCTCAAGATCTCATTCAGAATACCTTGGCTAGGGGGT
TACTCGGGATGTACCATGCCATGGCCTTGATCATGGTCACGACCTGCATC
CCATGGGACGACGAAACGGCATTTGACCTACAAACCGACGGGTTCATGTC
GATTATTCGTGAGGCAATCGGCATCTGTCAAGCCCTCAAAATCGCATATC
CAGATTTCCCCACGAGTGGATCTCTCAATTGCCCGTTGGGAATGGCTTTT
ACGATGGACATTGGCTTCATCCAGCCATTATATTATACCGCAATTAAGTG
CCGGATTCCTCAGATCCGACGACACGCGATCGAATTGCTTCGATTGGCAC
CGCACCGTGAAGGCATATGGAATGGCATTCTTACTGCTAGGATTGCGGAG
GAGGTAGTTGCTTATGAAGAGTGGACTATCGATGCAAGCCTTACTCTGGC
AAAGAGCTCAGATCTCCTCAGCTTGCCAGAGGCGGGTGATTCACTTACAG
TCTTGCCTTATCTGTGCCGAATCTCAGATGTTCGAGTCGAATTGCCCGAT
GAAAACACAGGAGAGGCTACCGTGGCTTTCTGGCAGCGCGAAGACGGTAG
AAGCTGGAAGGTTGATGAGAGAAAATTCCAGACGGAGGATCCATAA
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Coding sequence (CDS) from alignment at ch1:1272914..1274659-

>KJC3_000584-T1 ID=KJC3_000584-T1|Name=KJC3_000584-T1|organism=Aspergillus niger KJC3|type=CDS|length=3378bp|location=Sequence derived from alignment at ch1:1272914..1274659- (Aspergillus niger KJC3)
AATTCGTCGAGTCAAATGCGACGAGGGTCGACCGGCTTGCAAGAGATGCG
TATCAACTGGCCGAGTCTGCGATGGCTATGGGGTTTGGAGTGAAGCGAAA
AAGCCCACCGTCGACGGCAATACTGGCGCACCAAGAGCCTTCCAGAGTCT
GCTGTCTAGTTACAATGCACCGGTCCCAATTCCTCATGCCGCATGTGCTG
AGCGGAAATATGTGGAATGGTTCATCCAGTGTACCATTTTCAAAATTGGA
GGAGTGTTTTCTTCCCAATTCTGGGGCAGAACCGTTGTTCAAGCACTTTC
TCAAGAGCTAGCAGTACGGCATGCTGTTTTGGCATTGGCCTCTACGCATA
AATATAGGACTCAGAGGAGTGTTAGAGGTACTGCAACGGCAGGTCATCTA
AGCGAGCATGAGAAATTCACTCTCCAGCACTACAACAAAGCGATTGGCTG
TCTCCAAGCTGAAATAAGACGCAACAATAAACGAACGCAGAGTATGATAG
TTGCCCTCATTACTTGCATGGTTTTCGTGACTCTCGAAATGATGCGAGGC
CAATACCGAACAAGTCATACTCATCTACAGCACGGGCTGAAGCTGGTGAA
GGAGATTCAGAGGCTCTCCGGAGCCCCTAAGACCGGAAGAATTCGGATAA
GGACTTCGTCACAAACAAATGAGGATGATGTTATCGAGGTCTTTAGCAGA
CTGGAAGTGCACTATGCTCTACTTGGACATGGGACGAAGTACTCGAACCT
TGACTATGACGTTCAACCTCGTCACTTACCGTACAGATTTCCATCAATTG
AACAAGCAAGGCAATATCTGGATGTTCTGCTGGCAAGAGCACAGGGTCTG
GTGGAAATGGGGCGTCACATCGAGACGGACATGTTTGTTGCGACTCAGGG
CTACCAGCAGTTTCTCGAGTCTCAATGGCACCTGGAAAAGGACTTGGAAG
TATGGCTTGATGTTTATCGATCGTCACTTGGTAAATTCTCAGCTCAAGAT
CTCATTCAGAATACCTTGGCTAGGGGGTTACTCGGGATGTACCATGCCAT
GGCCTTGATCATGGTCACGACCTGCATCCCATGGGACGACGAAACGGCAT
TTGACCTACAAACCGACGGGTTCATGTCGATTATTCGTGAGGCAATCGGC
ATCTGTCAAGCCCTCAAAATCGCATATCCAGATTTCCCCACGAGTGGATC
TCTCAATTGCCCGTTGGGAATGGCTTTTACGATGGACATTGGCTTCATCC
AGCCATTATATTATACCGCAATTAAGTGCCGGATTCCTCAGATCCGACGA
CACGCGATCGAATTGCTTCGATTGGCACCGCACCGTGAAGGCATATGGAA
TGGCATTCTTACTGCTAGGATTGCGGAGGAGGTAGTTGCTTATGAAGAGT
GGACTATCGATGCAAGCCTTACTCTGGCAAAGAGCTCAGATCTCCTCAGC
TTGCCAGAGGCGGGTGATTCACTTACAGTCTTGCCTTATCTGTGCCGAAT
CTCAGATGTTCGAGTCGAATTGCCCGATGAAAACACAGGAGAGGCTACCG
TGGCTTTCTGGCAGCGCGAAGACGGTAGAAGCTGGAAGGTTGATGAGAGA
AAATTCCAGACGGAGGATCCATAAATGGAATCCGAGAAGAAGCGCCGTGC
GAGCAAACCTAAAGTCAAAACAGGCTGTCGGACATGCAAAATTCGTCGAG
TCAAATGCGACGAGGGTCGACCGGCTTGCAAGAGATGCGTATCAACTGGC
CGAGTCTGCGATGGCTATGGGGTTTGGAGTGAAGCGAAAAAGCCCACCGT
CGACGGCAATACTGGCGCACCAAGAGCCTTCCAGAGTCTGCTGTCTAGTT
ACAATGCACCGGTCCCAATTCCTCATGCCGCATGTGCTGAGCGGAAATAT
GTGGAATGGTTCATCCAGTGTACCATTTTCAAAATTGGAGGAGTGTTTTC
TTCCCAATTCTGGGGCAGAACCGTTGTTCAAGCACTTTCTCAAGAGCTAG
CAGTACGGCATGCTGTTTTGGCATTGGCCTCTACGCATAAATATAGGACT
CAGAGGAGTGTTAGAGGTACTGCAACGGCAGGTCATCTAAGCGAGCATGA
GAAATTCACTCTCCAGCACTACAACAAAGCGATTGGCTGTCTCCAAGCTG
AAATAAGACGCAACAATAAACGAACGCAGAGTATGATAGTTGCCCTCATT
ACTTGCATGGTTTTCGTGACTCTCGAAATGATGCGAGGCCAATACCGAAC
AAGTCATACTCATCTACAGCACGGGCTGAAGCTGGTGAAGGAGATTCAGA
GGCTCTCCGGAGCCCCTAAGACCGGAAGAATTCGGATAAGGACTTCGTCA
CAAACAAATGAGGATGATGTTATCGAGGTCTTTAGCAGACTGGAAGTGCA
CTATGCTCTACTTGGACATGGGACGAAGTACTCGAACCTTGACTATGACG
TTCAACCTCGTCACTTACCGTACAGATTTCCATCAATTGAACAAGCAAGG
CAATATCTGGATGTTCTGCTGGCAAGAGCACAGGGTCTGGTGGAAATGGG
GCGTCACATCGAGACGGACATGTTTGTTGCGACTCAGGGCTACCAGCAGT
TTCTCGAGTCTCAATGGCACCTGGAAAAGGACTTGGAAGTATGGCTTGAT
GTTTATCGATCGTCACTTGGTAAATTCTCAGCTCAAGATCTCATTCAGAA
TACCTTGGCTAGGGGGTTACTCGGGATGTACCATGCCATGGCCTTGATCA
TGGTCACGACCTGCATCCCATGGGACGACGAAACGGCATTTGACCTACAA
ACCGACGGGTTCATGTCGATTATTCGTGAGGCAATCGGCATCTGTCAAGC
CCTCAAAATCGCATATCCAGATTTCCCCACGAGTGGATCTCTCAATTGCC
CGTTGGGAATGGCTTTTACGATGGACATTGGCTTCATCCAGCCATTATAT
TATACCGCAATTAAGTGCCGGATTCCTCAGATCCGACGACACGCGATCGA
ATTGCTTCGATTGGCACCGCACCGTGAAGGCATATGGAATGGCATTCTTA
CTGCTAGGATTGCGGAGGAGGTAGTTGCTTATGAAGAGTGGACTATCGAT
GCAAGCCTTACTCTGGCAAAGAGCTCAGATCTCCTCAGCTTGCCAGAGGC
GGGTGATTCACTTACAGTCTTGCCTTATCTGTGCCGAATCTCAGATGTTC
GAGTCGAATTGCCCGATGAAAACACAGGAGAGGCTACCGTGGCTTTCTGG
CAGCGCGAAGACGGTAGAAGCTGGAAGGTTGATGAGAGAAAATTCCAGAC
GGAGGATCCATAAATGGAATCCGAGAAGAAGCGCCGTGCGAGCAAACCTA
AAGTCAAAACAGGCTGTCGGACATGCAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0042025host cell nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0008270zinc ion binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_000584KJC3_000584Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000584-T1KJC3_000584-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000584-T1.cdsKJC3_000584-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000584-T1.exon2KJC3_000584-T1.exon2Aspergillus niger KJC3exon
KJC3_000584-T1.exon1KJC3_000584-T1.exon1Aspergillus niger KJC3exon


Properties
Property NameValue
DBxrefInterPro:IPR021858
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR001138
DBxrefPFAM:PF00172
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:1272914..1274659 -
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