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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:1288013..1291052+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000588-T1 ID=KJC3_000588-T1|Name=KJC3_000588-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3040bp|location=Sequence derived from alignment at ch1:1288013..1291052+ (Aspergillus niger KJC3)
GATCGGTGGACCGTTCCTTTATATAGTATCTATTACCCCTCCTGCTCCTG
AGGAGTCCTTGGCTGCCCTGCTCTTTATTTTTGTCACTTTCCTTTATCAC
GATCTTACTTGTCTTTGTGCCTTATGGACGACATTTGACGTCCTTCCACT
CTTTAACATCTGGTCTACGCTTCCATATTCTGCGACATTTTGCCATTCTT
TTGTTTAACTTCTAGTCAATTCGCTCGTTTTCGCTATCCAAGGGAAAGAT
TTCTGGTTGATTCCAGCTAATAATTCGTGGCAAAAAACATGAGTAATGCA
ACTGAGTACTGAGCAGAGACCCTAGATTCCTGGTATCAGTCCCATTCCAA
GGAATCAACAAGACAAGTATTGATCGGCGGACGTCACCCTTGTTTATCCT
AGGGAAGAGAATGTAAGTTGCTACTGTTTCTTCTATTCTCTCCCTATCAC
GAGCTTGTTTTGTGGATTTATTCCTCCATCAGCCTTCGCCCTAAGCTGCA
TCCACGCGAAGGGCTGGTGGCGAGTGAAGAGCGCAGCCACTGGACTTGGT
ATGCAAGGGATCCCCTTGCCTTCAATCTGCCATCTACCTGAGCCCCAATC
TTACAGATTGGACGGCCGAGCGCGCTATAACAGTTTGGTGCCCGTTCCAG
AGTCAGTCGGAACTATTCCAGATTGCTTTGTCATTGTTGTTGTTATTCCC
TTTCTTATACTATGGCTGCCACCCGCGTCGGCACTTGCTTTCCCTATACC
AACTAGTTTTGACGGTTCCATCGCAGTGACTTTTCTTCCTTTCGGCTCCT
TTCATTCTTTGCTGGTCACTCCTTACTACATTTGATGGCTTGAAGCCTTG
ACTTATACTTTCGGCGACGCGTGTAGTCGATAAATCCACTCATTAAACTG
CACTCACTACCGCGCGTTCATCTCCATCGCTTATTTGAAGACCTATTATC
GACCATGCGACAAAACGTCGCTTTTCTGGCCTGTTTGGCCGCGCTTTCTA
GCGTTTCCCAAGCCTTTTGGCGTCTCCCTTGTCGTGGACGAAGTGGTGTG
GCTCGAATTGACCCCATAATGGCCCCTGGGAAACCATCAGACCATGTCCA
TGTGGTTCACGGATCAGGAGGTTCGTCTGGCTCCAGCGTGTCTGCATGAT
CATGCCTCCGCTAAACCTGGCTTCATAGGTTTCTCTATGTCATCGGGCGA
GACGGCCCTGAAAAATGCGGATTGTACCTCATGCGGGGTGACTCAAGACA
AGTCGGCTTACTGGGCCCCCGCGCTATACTTCATGCATGAGAATGGCGAT
GCTGAGCTTGTCAACGAAGTGGGCGGGATGCTTGCGTGAGTGGCGAAGCC
AATACCTAGTGCAGTCATACGCTAACCGATTCTCGCCAGTTACTACTTCC
TGAATGGACAGAATGTGACGGCATTCCCTGAGAACTTCCGTATGATTGCC
GGCGACCCATTCCTACGCAACTTCCCTTGGCCAGTTCCCGACCCTCCAAA
GTCCGAATGGTCTGGCAATCAATCCTCACAGGACGCTCTTCGCCAGAAAG
CCCTTGGTTTCAACTGCTTAAACTACAACAAGTCTCCTGAGCCGTCGCTG
GGCCGCCACTTCCTGCCAAACAAGACCTTCCTTGATGAGCATTGTACTGA
TGGCGTCCGATTTGAATTGATGTTCCCTTCATGTTGGAACGGCAAAGATG
TTGACTCGGAGGATCACAGGTCGCACATGGCCTACCCATCCCTAGTCATG
GACGGAGTTTGTCCGGAAGGCTTCGAGACCCGCCTTGTGTCGCTCTTCTA
TGAAACTATCTGGGACACCTATGCGTTCAAAAACAAGCAGGGAACTTTTG
TCCTTGCAAACGGTGACCCAACTGGATACGGCTACCACGGAGACTTCATC
TACGGCTGGCAATATGGGTTTCTCCAACAGGCAGTAGATGAATGCACCAA
CCTGTCTGGTCGGGTGGAAGATTGTCCCATATTTGATCTTCAGACAGATA
CCGAGCAGGCTCAGTGTAACTTCACCATGCCAGAGGAGCTGAAAAGCGAG
AACGTATACCTTCACAAGGGTGGCCTGCCGAATAACATCGCCATTCAGTA
TGGACCTGCGTATGCAAGCCCAGTCCGGTATACCAACGCTGGCCATCATA
CCTCGGCGATATTGCCTGAGCCAAGCATTGCTATCGGTGCTTCTCTTAAC
GGTGCTACTGTTGATCTCGGAAATATTCACATTGGAGTAACGCTGGGTGC
GGGTGCCCCTTCTACTACTACTACGACTTCAAGTACTCTCTCGACTTCAA
CTCTCCCATCTTCGACACAAACTTCAACCTTGACCACTTCAGCAGCTTCA
GCTTACTTTTTCCAAACCAGCACGTCAACTACACCAACCAGCACCTGGAC
ACCTACTCCTACCACATCTTATGTTGAAGGTGTTGTCACTCAAAAGATCG
TATACGTTGAGCAGGAGATCCTCATCCTCACGGATGAAAACGGAGCACCT
GTCACAACAGAGACGGGTGGAATCGAGACAGTCTCCACTTCTACATCTAC
TGTGAACAAGATTGTATCAACAGTCGTGACCACGCCAACCGAGGCCCCTG
CTAAGCGTGATGGTCATAGCCATGGGCATTTCCAGCATGTCCATAGGCGT
CATCGTCACGGACATGCTCATCGGTGATTCCATCGGGAATCCTTTTACCG
AAAGCGACTGGCGCGTACGTTGACAATGCCTATGGTATAAGCACATAAGC
AAGACCTGGGCCCTTTTGGTCCGGTCTAGCCTGGATTGGGGGTTCTCGAG
CTGGTTCCCTTGACTTCGTTTCTCTGGATGCAGTTTCATTGTTTCGGTTC
TCCGTGTATGAATGTCTATAACTTGTACATAATTACTGTTTGTTCCCCCT
TGTCTGGAACAGGTGAAAACTCGGGCTATTGTCTTGGCCTTCTCTTGATG
AGAGCTGAGATATGTCTTGTCAGATATGGTGTCAAATATTATGTGGATGA
ATACTATAATGTCAACCCCAGTATGCTTGTTTAGTACGCC back to topCoding sequence (CDS) from alignment at ch1:1288013..1291052+ >KJC3_000588-T1 ID=KJC3_000588-T1|Name=KJC3_000588-T1|organism=Aspergillus niger KJC3|type=CDS|length=4833bp|location=Sequence derived from alignment at ch1:1288013..1291052+ (Aspergillus niger KJC3)
ATGCGACAAAACGTCGCTTTTCTGGCCTGTTTGGCCGCGCTTTCTAGCGT
TTCCCAAGCCTTTTGGCGTCTCCCTTGTCGTGGACGAAGTGGTGTGGCTC
GAATTGACCCCATAATGGCCCCTGGGAAACCATCAGACCATGTCCATGTG
GTTCACGGATCAGGAGGTTTCTCTATGTCATCGGGCGAGACGGCCCTGAA
AAATGCGGATTGTACCTCATGCGGGGTGACTCAAGACAAGTCGGCTTACT
GGGCCCCCGCGCTATACTTCATGCATGAGAATGGCGATGCTGAGCTTGTC
AACGAAGTGGGCGGGATGCTTGCTTACTACTTCCTGAATGGACAGAATGT
GACGGCATTCCCTGAGAACTTCCGTATGATTGCCGGCGACCCATTCCTAC
GCAACTTCCCTTGGCCAGTTCCCGACCCTCCAAAGTCCGAATGGTCTGGC
AATCAATCCTCACAGGACGCTCTTCGCCAGAAAGCCCTTGGTTTCAACTG
CTTAAACTACAACAAGTCTCCTGAGCCGTCGCTGGGCCGCCACTTCCTGC
CAAACAAGACCTTCCTTGATGAGCATTGTACTGATGGCGTCCGATTTGAA
TTGATGTTCCCTTCATGTTGGAACGGCAAAGATGTTGACTCGGAGGATCA
CAGGTCGCACATGGCCTACCCATCCCTAGTCATGGACGGAGTTTGTCCGG
AAGGCTTCGAGACCCGCCTTGTGTCGCTCTTCTATGAAACTATCTGGGAC
ACCTATGCGTTCAAAAACAAGCAGGGAACTTTTGTCCTTGCAAACGGTGA
CCCAACTGGATACGGCTACCACGGAGACTTCATCTACGGCTGGCAATATG
GGTTTCTCCAACAGGCAGTAGATGAATGCACCAACCTGTCTGGTCGGGTG
GAAGATTGTCCCATATTTGATCTTCAGACAGATACCGAGCAGGCTCAGTG
TAACTTCACCATGCCAGAGGAGCTGAAAAGCGAGAACGTATACCTTCACA
AGGGTGGCCTGCCGAATAACATCGCCATTCAGTATGGACCTGCGTATGCA
AGCCCAGTCCGGTATACCAACGCTGGCCATCATACCTCGGCGATATTGCC
TGAGCCAAGCATTGCTATCGGTGCTTCTCTTAACGGTGCTACTGTTGATC
TCGGAAATATTCACATTGGAGTAACGCTGGGTGCGGGTGCCCCTTCTACT
ACTACTACGACTTCAAGTACTCTCTCGACTTCAACTCTCCCATCTTCGAC
ACAAACTTCAACCTTGACCACTTCAGCAGCTTCAGCTTACTTTTTCCAAA
CCAGCACGTCAACTACACCAACCAGCACCTGGACACCTACTCCTACCACA
TCTTATGTTGAAGGTGTTGTCACTCAAAAGATCGTATACGTTGAGCAGGA
GATCCTCATCCTCACGGATGAAAACGGAGCACCTGTCACAACAGAGACGG
GTGGAATCGAGACAGTCTCCACTTCTACATCTACTGTGAACAAGATTGTA
TCAACAGTCGTGACCACGCCAACCGAGGCCCCTGCTAAGCGTGATGGTCA
TAGCCATGGGCATTTCCAGCATGTCCATAGGCGTCATCGTCACGGACATG
CTCATCGGTGAATGCGACAAAACGTCGCTTTTCTGGCCTGTTTGGCCGCG
CTTTCTAGCGTTTCCCAAGCCTTTTGGCGTCTCCCTTGTCGTGGACGAAG
TGGTGTGGCTCGAATTGACCCCATAATGGCCCCTGGGAAACCATCAGACC
ATGTCCATGTGGTTCACGGATCAGGAGGTTTCTCTATGTCATCGGGCGAG
ACGGCCCTGAAAAATGCGGATTGTACCTCATGCGGGGTGACTCAAGACAA
GTCGGCTTACTGGGCCCCCGCGCTATACTTCATGCATGAGAATGGCGATG
CTGAGCTTGTCAACGAAGTGGGCGGGATGCTTGCTTACTACTTCCTGAAT
GGACAGAATGTGACGGCATTCCCTGAGAACTTCCGTATGATTGCCGGCGA
CCCATTCCTACGCAACTTCCCTTGGCCAGTTCCCGACCCTCCAAAGTCCG
AATGGTCTGGCAATCAATCCTCACAGGACGCTCTTCGCCAGAAAGCCCTT
GGTTTCAACTGCTTAAACTACAACAAGTCTCCTGAGCCGTCGCTGGGCCG
CCACTTCCTGCCAAACAAGACCTTCCTTGATGAGCATTGTACTGATGGCG
TCCGATTTGAATTGATGTTCCCTTCATGTTGGAACGGCAAAGATGTTGAC
TCGGAGGATCACAGGTCGCACATGGCCTACCCATCCCTAGTCATGGACGG
AGTTTGTCCGGAAGGCTTCGAGACCCGCCTTGTGTCGCTCTTCTATGAAA
CTATCTGGGACACCTATGCGTTCAAAAACAAGCAGGGAACTTTTGTCCTT
GCAAACGGTGACCCAACTGGATACGGCTACCACGGAGACTTCATCTACGG
CTGGCAATATGGGTTTCTCCAACAGGCAGTAGATGAATGCACCAACCTGT
CTGGTCGGGTGGAAGATTGTCCCATATTTGATCTTCAGACAGATACCGAG
CAGGCTCAGTGTAACTTCACCATGCCAGAGGAGCTGAAAAGCGAGAACGT
ATACCTTCACAAGGGTGGCCTGCCGAATAACATCGCCATTCAGTATGGAC
CTGCGTATGCAAGCCCAGTCCGGTATACCAACGCTGGCCATCATACCTCG
GCGATATTGCCTGAGCCAAGCATTGCTATCGGTGCTTCTCTTAACGGTGC
TACTGTTGATCTCGGAAATATTCACATTGGAGTAACGCTGGGTGCGGGTG
CCCCTTCTACTACTACTACGACTTCAAGTACTCTCTCGACTTCAACTCTC
CCATCTTCGACACAAACTTCAACCTTGACCACTTCAGCAGCTTCAGCTTA
CTTTTTCCAAACCAGCACGTCAACTACACCAACCAGCACCTGGACACCTA
CTCCTACCACATCTTATGTTGAAGGTGTTGTCACTCAAAAGATCGTATAC
GTTGAGCAGGAGATCCTCATCCTCACGGATGAAAACGGAGCACCTGTCAC
AACAGAGACGGGTGGAATCGAGACAGTCTCCACTTCTACATCTACTGTGA
ACAAGATTGTATCAACAGTCGTGACCACGCCAACCGAGGCCCCTGCTAAG
CGTGATGGTCATAGCCATGGGCATTTCCAGCATGTCCATAGGCGTCATCG
TCACGGACATGCTCATCGGTGAATGCGACAAAACGTCGCTTTTCTGGCCT
GTTTGGCCGCGCTTTCTAGCGTTTCCCAAGCCTTTTGGCGTCTCCCTTGT
CGTGGACGAAGTGGTGTGGCTCGAATTGACCCCATAATGGCCCCTGGGAA
ACCATCAGACCATGTCCATGTGGTTCACGGATCAGGAGGTTTCTCTATGT
CATCGGGCGAGACGGCCCTGAAAAATGCGGATTGTACCTCATGCGGGGTG
ACTCAAGACAAGTCGGCTTACTGGGCCCCCGCGCTATACTTCATGCATGA
GAATGGCGATGCTGAGCTTGTCAACGAAGTGGGCGGGATGCTTGCTTACT
ACTTCCTGAATGGACAGAATGTGACGGCATTCCCTGAGAACTTCCGTATG
ATTGCCGGCGACCCATTCCTACGCAACTTCCCTTGGCCAGTTCCCGACCC
TCCAAAGTCCGAATGGTCTGGCAATCAATCCTCACAGGACGCTCTTCGCC
AGAAAGCCCTTGGTTTCAACTGCTTAAACTACAACAAGTCTCCTGAGCCG
TCGCTGGGCCGCCACTTCCTGCCAAACAAGACCTTCCTTGATGAGCATTG
TACTGATGGCGTCCGATTTGAATTGATGTTCCCTTCATGTTGGAACGGCA
AAGATGTTGACTCGGAGGATCACAGGTCGCACATGGCCTACCCATCCCTA
GTCATGGACGGAGTTTGTCCGGAAGGCTTCGAGACCCGCCTTGTGTCGCT
CTTCTATGAAACTATCTGGGACACCTATGCGTTCAAAAACAAGCAGGGAA
CTTTTGTCCTTGCAAACGGTGACCCAACTGGATACGGCTACCACGGAGAC
TTCATCTACGGCTGGCAATATGGGTTTCTCCAACAGGCAGTAGATGAATG
CACCAACCTGTCTGGTCGGGTGGAAGATTGTCCCATATTTGATCTTCAGA
CAGATACCGAGCAGGCTCAGTGTAACTTCACCATGCCAGAGGAGCTGAAA
AGCGAGAACGTATACCTTCACAAGGGTGGCCTGCCGAATAACATCGCCAT
TCAGTATGGACCTGCGTATGCAAGCCCAGTCCGGTATACCAACGCTGGCC
ATCATACCTCGGCGATATTGCCTGAGCCAAGCATTGCTATCGGTGCTTCT
CTTAACGGTGCTACTGTTGATCTCGGAAATATTCACATTGGAGTAACGCT
GGGTGCGGGTGCCCCTTCTACTACTACTACGACTTCAAGTACTCTCTCGA
CTTCAACTCTCCCATCTTCGACACAAACTTCAACCTTGACCACTTCAGCA
GCTTCAGCTTACTTTTTCCAAACCAGCACGTCAACTACACCAACCAGCAC
CTGGACACCTACTCCTACCACATCTTATGTTGAAGGTGTTGTCACTCAAA
AGATCGTATACGTTGAGCAGGAGATCCTCATCCTCACGGATGAAAACGGA
GCACCTGTCACAACAGAGACGGGTGGAATCGAGACAGTCTCCACTTCTAC
ATCTACTGTGAACAAGATTGTATCAACAGTCGTGACCACGCCAACCGAGG
CCCCTGCTAAGCGTGATGGTCATAGCCATGGGCATTTCCAGCATGTCCAT
AGGCGTCATCGTCACGGACATGCTCATCGGTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000588-T1.utr3p1 | KJC3_000588-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_1.5 |
| Note | SECRETED:SignalP(1-20) |
| DBxref | InterPro:IPR018535 |
| DBxref | PFAM:PF09362 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:1288013..1291052 + |
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