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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:1319524..1322400+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000600-T1 ID=KJC3_000600-T1|Name=KJC3_000600-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2877bp|location=Sequence derived from alignment at ch1:1319524..1322400+ (Aspergillus niger KJC3)
TTCATCTTCCGCAAAGGCTGCAATGTAAGGGCAGGGGACCTTCGGCCAGT
GGGCGGGTCACACTTGATCAAGCCGAATGGCGAGCTTTGGAGGCTCATTC
GCCGAGCAGAAAGAATGATCGGAAGGTGTGGAAAGGGCGAGATGACCGGT
CGGACAACGTTGTCTAACTACTTACTAGGCTGGCGGATGATACTTTTTGC
TTTTAGTTTTTAGTTGGAAGCCGATCAATCAGAGCGAATCCGCGACCTGC
AGGCGTTGATTGGCAAATGCCGGCGCCAACCGCCTTGGGCCCAGCCAATG
AAACGGCGGGCCGGGCTGATGGTGCGACGGATGGGCTGGCAGGGGGGGAA
ACATTTACTGAGATTCTACACAGTAAACAGAGAAATGCGTCGTTAGCCGA
AGTCCCAGGTTCCGCTGCGGGCTTGTTTCATCTTTGGGCTATGGAGTCCC
TTCTCGTCAGGGACCACTCAGGGTCCATCTACCCTCCACCAAAACTATGT
GTCCCACGACTCGACATGCAACCCAATTCACTGTCTGTCAATCTTCTCCC
CCTCCCCACTCACACGCATCTTGACTTTCGGTGCGCGCCTACTAACAGCC
TGTCTCGATCCGTCCAGTCTCCTGGATACCTGATTCACCGTCATGGCGCC
TCAAACAGTCCAAATCTTAAGTATATAACACCCCCCAGGGCTGCCAGTGC
TGCTCCCTTTTCTTCTTTCTCTTCTTCAACCACGCTGGAGCGTTCAGTCC
TTTCTTCGTTCTACACTGTTCGACAGTCCTACTATCACCAGGCTAGTCCT
GCTTTCTTTCGACACTCCTTTCTGATTTCATTTGAATCTTCGTTGTGTGC
CTGCGGCAGACTCCGACCTTCCCTTCTACTTCCAACGAACTGAAGCTATC
CTTGTCCAGTAGTATCAGACGCGTGACAAAGGCCTGTTTCGACCAGATAA
AGTCAACGCTGGGACAAGCTCACCTTCCATTCGGTTCTACAAAGGTATTG
TCACCTCGCCTTATCCTGGTATCTTCCCGTGTACCATTTCATTGTCTACC
ATAACCTTGTTGCCCCTCTACACATCCTCGACCACTATACTGCTTCAACT
ATACGGTTGTCACCGTCTGTTGCTCCTATACTTCCCACCAACGTATCATG
CACTATCTCGATATAAATCCTTCCTTTCTCTCCTTCTTGGCTAATCCATC
TGCACTAGACTTTTGCTCAACGCAACCACCTGTTCTGTCTCGTCCGGTAC
GGTCAGAACTTCAAACACTCCTTTAGCTGTCGAATAGTGCAAAACAAAAC
CGACGCTCCTTCACCATGTTTTCCAAGTCCATTCTTGCGGCCGCTGCTCT
CCTGGGCATTTCGGCTGTTGAAGCACACATGATCATGACTGAGCCCATTC
CCTATGGCAAGGACACCCTTAACAACTCGCCTCTTGCAGCCGATGGCAGC
GACTTTCCTTGCAAGCTGCGCTCGAACACCTACGAGGTCACCGAGTGGAA
TACCGCCCAGATCGGCGAGAGCATGCCTTTGACCTTTGAGGGTTCCGCCA
CCCATGGTGGTGGCTCCTGCCAGGTCAGTCTGACCACCGATCTGCAGCCT
ACCAAGGACTCCGAATGGATGGTCATCAAGTCTATCGAAGGCGGCTGCCC
CGCCAACGTGGACGGTAACCTTTCTGGTGGTGCTTCCATGGCTGATCCGA
CCAAATTCAACTACACCATTCCGGACGGCATTAGCCCCGGCAAGTACACG
CTCGCCTGGACTTGGTTCAACCGCATTGGAAACCGTGAGATGTACATGAA
CTGTGCTCCCCTCGAGGTCCAGAGCGCTTCTTCTAAGAGGTCCGATGTTG
AGGAAAAGCGCGATGTCGAGAAGCGCTCTTCCACCTTCCCTCCCATGTTT
GTCGCCAACGTCAACGGCTGCACCACCTCCGAAGGTGTCGACATCCGATT
CCCTCAGCCTGGTGACGACATCCAATATAATGGCGAGCCTAGCAACCTGG
CTTCCGCTGGCGCCGCCGCCTGTACCGGTACTCCCACTTTTGCTGCCGCT
GGTGACAGCAGCACTGGCTCCTACTCTGGTTCTGGCTCCAGCTCTGGCTC
CGGCTCCGGCTCTGCCAGTTCTTCGGCCGCTGCTGTGGTTACTTCTGCCC
CGGCCGCAAACACCTACACTGCTCCTGCGGTGGCGAACACTCCTGCACCC
AGCTCCGGCAGCAGCGGCTCTAGCTCTGGTTCTGACTCCGGTTCTGGCTC
CAACTCTGTCTCCAGCCCTCAACCCAGCTCTAGCTCCAGCGCAAGCTCCA
GCGCAAGCTCTGGCGCGCTCTCTGGATCTTGCAGTGTGGAGGGCGAGTGG
AACTGCATCAATGGCTCCTCTTTCCAGCGCTGCGCGAACGGCCAGTGGAC
CCCTGCTCAGAATGTGGCTGCCGGTACCCAGTGCACTGCTGGACAGAGCT
CCAACTTGGCCATTTCTGCCATCAAGTTGAAGCCCCGTACCGTTAGGGAG
GGCCGCGCCAGACGCCACGCTCACGGTGGACATGTGCACGCTTAAATGTG
GATTAAAAATGTGATTCGGGTGGCTAGCCCATACCGATTGAGACTTACAT
TCGTTTCCTTGCACAAGGCGTAGTGCTAGGACCCTTTTTGAGATTTCTGT
TTACCTTCATGTACCATTTGCAGTAGAGAGGATCCTAAATGAAATAAACG
TTGGCCAACGAATCTTTTTACCGTTCTATGACTGTAGAACGTATTCACGA
GTATAGAATGAGGGCTTGTAGGGTGTAAGTGCATGCCGCAGTAACGACTC
AGATTGTGCTCTGGGCGTCAGCCGATCTGTTGTGGCGATGATGTTAGACG
TCAAGACTTTGCAGGGCTGAACTCGAC back to topCoding sequence (CDS) from alignment at ch1:1319524..1322400+ >KJC3_000600-T1 ID=KJC3_000600-T1|Name=KJC3_000600-T1|organism=Aspergillus niger KJC3|type=CDS|length=1230bp|location=Sequence derived from alignment at ch1:1319524..1322400+ (Aspergillus niger KJC3)
ATGTTTTCCAAGTCCATTCTTGCGGCCGCTGCTCTCCTGGGCATTTCGGC
TGTTGAAGCACACATGATCATGACTGAGCCCATTCCCTATGGCAAGGACA
CCCTTAACAACTCGCCTCTTGCAGCCGATGGCAGCGACTTTCCTTGCAAG
CTGCGCTCGAACACCTACGAGGTCACCGAGTGGAATACCGCCCAGATCGG
CGAGAGCATGCCTTTGACCTTTGAGGGTTCCGCCACCCATGGTGGTGGCT
CCTGCCAGGTCAGTCTGACCACCGATCTGCAGCCTACCAAGGACTCCGAA
TGGATGGTCATCAAGTCTATCGAAGGCGGCTGCCCCGCCAACGTGGACGG
TAACCTTTCTGGTGGTGCTTCCATGGCTGATCCGACCAAATTCAACTACA
CCATTCCGGACGGCATTAGCCCCGGCAAGTACACGCTCGCCTGGACTTGG
TTCAACCGCATTGGAAACCGTGAGATGTACATGAACTGTGCTCCCCTCGA
GGTCCAGAGCGCTTCTTCTAAGAGGTCCGATGTTGAGGAAAAGCGCGATG
TCGAGAAGCGCTCTTCCACCTTCCCTCCCATGTTTGTCGCCAACGTCAAC
GGCTGCACCACCTCCGAAGGTGTCGACATCCGATTCCCTCAGCCTGGTGA
CGACATCCAATATAATGGCGAGCCTAGCAACCTGGCTTCCGCTGGCGCCG
CCGCCTGTACCGGTACTCCCACTTTTGCTGCCGCTGGTGACAGCAGCACT
GGCTCCTACTCTGGTTCTGGCTCCAGCTCTGGCTCCGGCTCCGGCTCTGC
CAGTTCTTCGGCCGCTGCTGTGGTTACTTCTGCCCCGGCCGCAAACACCT
ACACTGCTCCTGCGGTGGCGAACACTCCTGCACCCAGCTCCGGCAGCAGC
GGCTCTAGCTCTGGTTCTGACTCCGGTTCTGGCTCCAACTCTGTCTCCAG
CCCTCAACCCAGCTCTAGCTCCAGCGCAAGCTCCAGCGCAAGCTCTGGCG
CGCTCTCTGGATCTTGCAGTGTGGAGGGCGAGTGGAACTGCATCAATGGC
TCCTCTTTCCAGCGCTGCGCGAACGGCCAGTGGACCCCTGCTCAGAATGT
GGCTGCCGGTACCCAGTGCACTGCTGGACAGAGCTCCAACTTGGCCATTT
CTGCCATCAAGTTGAAGCCCCGTACCGTTAGGGAGGGCCGCGCCAGACGC
CACGCTCACGGTGGACATGTGCACGCTTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000600-T1.utr3p1 | KJC3_000600-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_1.5 |
| Note | SECRETED:SignalP(1-20) |
| Note | CAZy:AA11 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:1319524..1322400 + |
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