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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:1371555..1372229- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000617-T1 ID=KJC3_000617-T1|Name=KJC3_000617-T1|organism=Aspergillus niger KJC3|type=mRNA|length=675bp|location=Sequence derived from alignment at ch1:1371555..1372229- (Aspergillus niger KJC3)
AGAACACATCAAATCCTGCATACGCAAGGACCTATTGAGTCAGCCAATCA
CACTCACGTAACTTTTCGTTTCGCCCACGATGCTCTTCCGCAACATTGCC
TTCTACCTCACTGCTGGCGCCTGTCTCGCAGTATCCCCCGTTCTGGGCGC
CAGCGACATCAATCAAGCTGTCTCGGACATGAACGCCCTTACCACTGCCA
TTCAAAATGCCCGCCAGTCCCTAGACAACTACCAGGGAGGGACGATCTCT
AGCCTCAAGGTTAAGACTTCTGTGCAGGCAGCCAAAAGCGCCGCTCAGAA
AGCTCGCCAGAACCTGGCTCAGCAAGACGAGCCCTTCAATGATGACGAGG
CCGAGCAATATTACCAGGCCTACCAGGCAATGTGCCCAGAACTCGTGGAC
ACAGTGAAGGTAGCACAGGACAAGGTATTATGCTCTGGGCGGTTCCAACT
TCACCGATTCGATATGCTAATATCTTTCTTGTGCAGGCGCCTCTATTCAA
AAACGCTGGATTGGCGTCACCCGCGAGGGCGACCATTGATTCACTCCGGG
ATGAGCAGGACCAGTTCGGGGAGGAAGCCCAGAAGCACGTCCCTGCGGAC
GTCTATGCCAGGGCAGTTCCTTGTTCGGATCAAATCAGGCAGGCGTTTGA
TGACAATGACAATGCTCTGTCTTGA back to topCoding sequence (CDS) from alignment at ch1:1371555..1372229- >KJC3_000617-T1 ID=KJC3_000617-T1|Name=KJC3_000617-T1|organism=Aspergillus niger KJC3|type=CDS|length=1068bp|location=Sequence derived from alignment at ch1:1371555..1372229- (Aspergillus niger KJC3)
GCGCCTCTATTCAAAAACGCTGGATTGGCGTCACCCGCGAGGGCGACCAT
TGATTCACTCCGGGATGAGCAGGACCAGTTCGGGGAGGAAGCCCAGAAGC
ACGTCCCTGCGGACGTCTATGCCAGGGCAGTTCCTTGTTCGGATCAAATC
AGGCAGGCGTTTGATGACAATGACAATGCTCTGTCTTGAATGCTCTTCCG
CAACATTGCCTTCTACCTCACTGCTGGCGCCTGTCTCGCAGTATCCCCCG
TTCTGGGCGCCAGCGACATCAATCAAGCTGTCTCGGACATGAACGCCCTT
ACCACTGCCATTCAAAATGCCCGCCAGTCCCTAGACAACTACCAGGGAGG
GACGATCTCTAGCCTCAAGGTTAAGACTTCTGTGCAGGCAGCCAAAAGCG
CCGCTCAGAAAGCTCGCCAGAACCTGGCTCAGCAAGACGAGCCCTTCAAT
GATGACGAGGCCGAGCAATATTACCAGGCCTACCAGGCAATGTGCCCAGA
ACTCGTGGACACAGTGAAGGTAGCACAGGACAAGGCGCCTCTATTCAAAA
ACGCTGGATTGGCGTCACCCGCGAGGGCGACCATTGATTCACTCCGGGAT
GAGCAGGACCAGTTCGGGGAGGAAGCCCAGAAGCACGTCCCTGCGGACGT
CTATGCCAGGGCAGTTCCTTGTTCGGATCAAATCAGGCAGGCGTTTGATG
ACAATGACAATGCTCTGTCTTGAATGCTCTTCCGCAACATTGCCTTCTAC
CTCACTGCTGGCGCCTGTCTCGCAGTATCCCCCGTTCTGGGCGCCAGCGA
CATCAATCAAGCTGTCTCGGACATGAACGCCCTTACCACTGCCATTCAAA
ATGCCCGCCAGTCCCTAGACAACTACCAGGGAGGGACGATCTCTAGCCTC
AAGGTTAAGACTTCTGTGCAGGCAGCCAAAAGCGCCGCTCAGAAAGCTCG
CCAGAACCTGGCTCAGCAAGACGAGCCCTTCAATGATGACGAGGCCGAGC
AATATTACCAGGCCTACCAGGCAATGTGCCCAGAACTCGTGGACACAGTG
AAGGTAGCACAGGACAAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000617-T1.utr5p1 | KJC3_000617-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_1.6 |
| Note | SECRETED:SignalP(1-23) |
| DBxref | InterPro:IPR021054 |
| DBxref | PFAM:PF12296 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:1371555..1372229 - |
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