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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:1402187..1403087- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000626-T1 ID=KJC3_000626-T1|Name=KJC3_000626-T1|organism=Aspergillus niger KJC3|type=mRNA|length=901bp|location=Sequence derived from alignment at ch1:1402187..1403087- (Aspergillus niger KJC3)
TTCTACGCTGAATTGCTGCGCGCGATGTCATTATAGACAATTGCATACTC
TCTTTCGACATCTATATTAATAGCTCTTTTCATTACTACAGGATTATCTC
CTTTTCTTACCTACACCCACCACACCACATCCTCAACACCAACACCAATT
GACCCCGCATATTCCCCCTCTCCTCCACCCAACACTCCAAACTCCACATT
ACAATAGACTATACAAATTTACATTAGAAGATAGAAGGAGATAAAATGGG
CGACCACATCCTCTTCTTCTACGGTAACCCCCACCCCTCTTCCTCCCCTT
CCACTCCACATCTACTAAACATCTAAAGGAACCCTAATGGCCCCTCCCAT
CCTCCACCGCGTAATCCACGGCCACTCCACCCCCGAGCCATGGCAAAAGG
CTCTTTTAACAGTCAAGCCTGCAATTCTGCATGGATACCGACGCCATAGG
GTTCGGTATGCGGATTATCCGGGTATTATACCCACACCTTCTTCATCTGG
TGCAGATGATGGCAATGATACTACTACGGCCGGTAGTGGTGGTGAAGCAT
CTGTGCTAGGCACAGTAGTGTGGGGATTGACAGATGGAGATGTGTATCGA
TTGGATCGGTTCGAGGGGAGTGAATATGAGAAGAGGGTGGTTAGGGTGAG
GGTTTTAGAGAGCCATCATCATGATGAGGGTGATAATGGGAAAGCAGGGG
ATATACAAGAGGTTTTGGATGCAGTGGAGACAGAGGGCAGCGAGACAAAG
GAGGGGAAAGAAGTAGAGGCCGTGACGTATGTGTGGACTGCTGGAAAGGA
GCGATTAGAGGATGCCGAGTGGGACTTTGAAGCCTTCAAGCGAGATAAGA
TGGCGTGGTGGGTGGAGGCGGATGAGAAGGATTGGTAGATAATAGATAGA
A back to topCoding sequence (CDS) from alignment at ch1:1402187..1403087- >KJC3_000626-T1 ID=KJC3_000626-T1|Name=KJC3_000626-T1|organism=Aspergillus niger KJC3|type=CDS|length=1176bp|location=Sequence derived from alignment at ch1:1402187..1403087- (Aspergillus niger KJC3)
GAACCCTAATGGCCCCTCCCATCCTCCACCGCGTAATCCACGGCCACTCC
ACCCCCGAGCCATGGCAAAAGGCTCTTTTAACAGTCAAGCCTGCAATTCT
GCATGGATACCGACGCCATAGGGTTCGGTATGCGGATTATCCGGGTATTA
TACCCACACCTTCTTCATCTGGTGCAGATGATGGCAATGATACTACTACG
GCCGGTAGTGGTGGTGAAGCATCTGTGCTAGGCACAGTAGTGTGGGGATT
GACAGATGGAGATGTGTATCGATTGGATCGGTTCGAGGGGAGTGAATATG
AGAAGAGGGTGGTTAGGGTGAGGGTTTTAGAGAGCCATCATCATGATGAG
GGTGATAATGGGAAAGCAGGGGATATACAAGAGGTTTTGGATGCAGTGGA
GACAGAGGGCAGCGAGACAAAGGAGGGGAAAGAAGTAGAGGCCGTGACGT
ATGTGTGGACTGCTGGAAAGGAGCGATTAGAGGATGCCGAGTGGGACTTT
GAAGCCTTCAAGCGAGATAAGATGGCGTGGTGGGTGGAGGCGGATGAGAA
GGATTGGTAGATGGGCGACCACATCCTCTTCTTCTACGGAACCCTAATGG
CCCCTCCCATCCTCCACCGCGTAATCCACGGCCACTCCACCCCCGAGCCA
TGGCAAAAGGCTCTTTTAACAGTCAAGCCTGCAATTCTGCATGGATACCG
ACGCCATAGGGTTCGGTATGCGGATTATCCGGGTATTATACCCACACCTT
CTTCATCTGGTGCAGATGATGGCAATGATACTACTACGGCCGGTAGTGGT
GGTGAAGCATCTGTGCTAGGCACAGTAGTGTGGGGATTGACAGATGGAGA
TGTGTATCGATTGGATCGGTTCGAGGGGAGTGAATATGAGAAGAGGGTGG
TTAGGGTGAGGGTTTTAGAGAGCCATCATCATGATGAGGGTGATAATGGG
AAAGCAGGGGATATACAAGAGGTTTTGGATGCAGTGGAGACAGAGGGCAG
CGAGACAAAGGAGGGGAAAGAAGTAGAGGCCGTGACGTATGTGTGGACTG
CTGGAAAGGAGCGATTAGAGGATGCCGAGTGGGACTTTGAAGCCTTCAAG
CGAGATAAGATGGCGTGGTGGGTGGAGGCGGATGAGAAGGATTGGTAGAT
GGGCGACCACATCCTCTTCTTCTACG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000626-T1.utr3p1 | KJC3_000626-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000626-T1.utr5p1 | KJC3_000626-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036568 |
| DBxref | InterPro:IPR013024 |
| DBxref | InterPro:IPR009288 |
| DBxref | PFAM:PF06094 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:1402187..1403087 - |
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