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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:1428278..1429787- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000636-T1 ID=KJC3_000636-T1|Name=KJC3_000636-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1510bp|location=Sequence derived from alignment at ch1:1428278..1429787- (Aspergillus niger KJC3)
CAGCTCAAGGAGTCGTATTCTTCCAATTCCCGATACTCGCGAAAAATGAG
CAGGGAGAATGTTACGGACGAGCGGGAGCCTCCAGACATTGAGCGAAATG
AACCTGCCAAATTTCCAGACGGTGGACTTCGTGCATGGCTCGTAGTTGTC
GGTGCTTTCTTTGGACTCTTTACAAGCTTTGGGTGGACCAATTGTGAGCA
ACACACCATTCTGGACAAGCTGACGCTAATTCCACCAAATCATCAGGCGT
TGGCATATTTCAAGCATACTATCAAACCCATCAGCTCCGAACCATGTCCG
CCAGCACCGTGTCCTGGATTCCCGGGATATCTATGTTCATGATGTTTATT
ACGGTAAGCTCCATTCTAACATCTCGACCAACTGCTCAAGTCTTATATCG
GGTAGACATTGACTCAATTAAATGACAACCTGCAGGGTCCTTTTGTTGGT
CGGCTGTTCGATGCATACGGGCCTCGATGGCTTCTGCTCATCGGGTCTCT
GCTACACGTATTTGGACTTCTGATGGCTTCATTTGCTTCTCGGTATTATC
AATTCATCCTGTCTCAGTCAATCTGCAGCCCTTTGGGTGCGAGTATGGTG
CTGTACTCCTCGTTCAATTGCGTCGCAACCTGGTTCCGAGAAAAGCGCGC
TTTGGCAATGGGCATCACCGCAAGTGGCTCCAGCCTGGGGGGTGTTGTCA
TGCCAATTCTTGTCGATCATATCATCGATAGGAATGGCTTTGGCTGGGCC
ATGAGGATTTGCGCCTTATTCATGCTCGCCTTGCTGGTTGTGACCAACTT
AACCGTTCGCTCCCGGCTAAGACCGCATCCCACTACTTTGACTTTGACGA
GTTATTTGAAGAACTTTACCGATATACCCTTCGTTCTGGTGACATTGGCG
AGCTTTTTCTATTCGATGGGGATGTTTATCCCCATTACATATATCGTCAC
CTACGGCCAACATGTGGGTATGCGGACCAGTCTCGCTGGGTACCTCGTCT
CCATCTTCAATGCTGCAAGGTAGGTGACAACGCAACAGAGCCCGAGATTA
TCCTTGAACATGCTCATGAACGCAACGTAGTGGCATCGGCCGAGTACTGC
CGGGGTATGCGGCAGACAAGATCGGAAACTTCAATATTTCAATATGTGCA
GCGGCCCTGTCTACGGTGTTTGTCCTAGGCTTATGGCTCCCTGGCCACTC
TCAGGCAACTGCGATTGCGTTCGCCGCAACTTTTGGGTTTAGTTCTGGAA
CCTACACGGCTCTGAGCCCAGCTTTGGTCGCCCAAATCTCGGACATTCGT
GAGATTGGCACCCGGTCGGGAGCGCTGTATGCTTTCATGTCAATTTCGGC
ATTGGTCGGCAGCCCCATCGGCGGTTCGTTAATTGCCAAGGCGCACGGAG
AGTATTGGAAGTTGCAGGTCTTTACTGGCATGATGCTGGCGGGAGGAACG
CTGTTCTATTCTGCGACTCGCTTTCGCTTGACCAAAGGCAAGGTCTGGGT
GAAAGTGTAA back to topCoding sequence (CDS) from alignment at ch1:1428278..1429787- >KJC3_000636-T1 ID=KJC3_000636-T1|Name=KJC3_000636-T1|organism=Aspergillus niger KJC3|type=CDS|length=5076bp|location=Sequence derived from alignment at ch1:1428278..1429787- (Aspergillus niger KJC3)
TGGCATCGGCCGAGTACTGCCGGGGTATGCGGCAGACAAGATCGGAAACT
TCAATATTTCAATATGTGCAGCGGCCCTGTCTACGGTGTTTGTCCTAGGC
TTATGGCTCCCTGGCCACTCTCAGGCAACTGCGATTGCGTTCGCCGCAAC
TTTTGGGTTTAGTTCTGGAACCTACACGGCTCTGAGCCCAGCTTTGGTCG
CCCAAATCTCGGACATTCGTGAGATTGGCACCCGGTCGGGAGCGCTGTAT
GCTTTCATGTCAATTTCGGCATTGGTCGGCAGCCCCATCGGCGGTTCGTT
AATTGCCAAGGCGCACGGAGAGTATTGGAAGTTGCAGGTCTTTACTGGCA
TGATGCTGGCGGGAGGAACGCTGTTCTATTCTGCGACTCGCTTTCGCTTG
ACCAAAGGCAAGGTCTGGGTGAAAGTGTAAGGTCCTTTTGTTGGTCGGCT
GTTCGATGCATACGGGCCTCGATGGCTTCTGCTCATCGGGTCTCTGCTAC
ACGTATTTGGACTTCTGATGGCTTCATTTGCTTCTCGGTATTATCAATTC
ATCCTGTCTCAGTCAATCTGCAGCCCTTTGGGTGCGAGTATGGTGCTGTA
CTCCTCGTTCAATTGCGTCGCAACCTGGTTCCGAGAAAAGCGCGCTTTGG
CAATGGGCATCACCGCAAGTGGCTCCAGCCTGGGGGGTGTTGTCATGCCA
ATTCTTGTCGATCATATCATCGATAGGAATGGCTTTGGCTGGGCCATGAG
GATTTGCGCCTTATTCATGCTCGCCTTGCTGGTTGTGACCAACTTAACCG
TTCGCTCCCGGCTAAGACCGCATCCCACTACTTTGACTTTGACGAGTTAT
TTGAAGAACTTTACCGATATACCCTTCGTTCTGGTGACATTGGCGAGCTT
TTTCTATTCGATGGGGATGTTTATCCCCATTACATATATCGTCACCTACG
GCCAACATGTGGGTATGCGGACCAGTCTCGCTGGGTACCTCGTCTCCATC
TTCAATGCTGCAAGGCGTTGGCATATTTCAAGCATACTATCAAACCCATC
AGCTCCGAACCATGTCCGCCAGCACCGTGTCCTGGATTCCCGGGATATCT
ATGTTCATGATGTTTATTACGATGAGCAGGGAGAATGTTACGGACGAGCG
GGAGCCTCCAGACATTGAGCGAAATGAACCTGCCAAATTTCCAGACGGTG
GACTTCGTGCATGGCTCGTAGTTGTCGGTGCTTTCTTTGGACTCTTTACA
AGCTTTGGGTGGACCAATTTGGCATCGGCCGAGTACTGCCGGGGTATGCG
GCAGACAAGATCGGAAACTTCAATATTTCAATATGTGCAGCGGCCCTGTC
TACGGTGTTTGTCCTAGGCTTATGGCTCCCTGGCCACTCTCAGGCAACTG
CGATTGCGTTCGCCGCAACTTTTGGGTTTAGTTCTGGAACCTACACGGCT
CTGAGCCCAGCTTTGGTCGCCCAAATCTCGGACATTCGTGAGATTGGCAC
CCGGTCGGGAGCGCTGTATGCTTTCATGTCAATTTCGGCATTGGTCGGCA
GCCCCATCGGCGGTTCGTTAATTGCCAAGGCGCACGGAGAGTATTGGAAG
TTGCAGGTCTTTACTGGCATGATGCTGGCGGGAGGAACGCTGTTCTATTC
TGCGACTCGCTTTCGCTTGACCAAAGGCAAGGTCTGGGTGAAAGTGTAAG
GTCCTTTTGTTGGTCGGCTGTTCGATGCATACGGGCCTCGATGGCTTCTG
CTCATCGGGTCTCTGCTACACGTATTTGGACTTCTGATGGCTTCATTTGC
TTCTCGGTATTATCAATTCATCCTGTCTCAGTCAATCTGCAGCCCTTTGG
GTGCGAGTATGGTGCTGTACTCCTCGTTCAATTGCGTCGCAACCTGGTTC
CGAGAAAAGCGCGCTTTGGCAATGGGCATCACCGCAAGTGGCTCCAGCCT
GGGGGGTGTTGTCATGCCAATTCTTGTCGATCATATCATCGATAGGAATG
GCTTTGGCTGGGCCATGAGGATTTGCGCCTTATTCATGCTCGCCTTGCTG
GTTGTGACCAACTTAACCGTTCGCTCCCGGCTAAGACCGCATCCCACTAC
TTTGACTTTGACGAGTTATTTGAAGAACTTTACCGATATACCCTTCGTTC
TGGTGACATTGGCGAGCTTTTTCTATTCGATGGGGATGTTTATCCCCATT
ACATATATCGTCACCTACGGCCAACATGTGGGTATGCGGACCAGTCTCGC
TGGGTACCTCGTCTCCATCTTCAATGCTGCAAGGCGTTGGCATATTTCAA
GCATACTATCAAACCCATCAGCTCCGAACCATGTCCGCCAGCACCGTGTC
CTGGATTCCCGGGATATCTATGTTCATGATGTTTATTACGATGAGCAGGG
AGAATGTTACGGACGAGCGGGAGCCTCCAGACATTGAGCGAAATGAACCT
GCCAAATTTCCAGACGGTGGACTTCGTGCATGGCTCGTAGTTGTCGGTGC
TTTCTTTGGACTCTTTACAAGCTTTGGGTGGACCAATTTGGCATCGGCCG
AGTACTGCCGGGGTATGCGGCAGACAAGATCGGAAACTTCAATATTTCAA
TATGTGCAGCGGCCCTGTCTACGGTGTTTGTCCTAGGCTTATGGCTCCCT
GGCCACTCTCAGGCAACTGCGATTGCGTTCGCCGCAACTTTTGGGTTTAG
TTCTGGAACCTACACGGCTCTGAGCCCAGCTTTGGTCGCCCAAATCTCGG
ACATTCGTGAGATTGGCACCCGGTCGGGAGCGCTGTATGCTTTCATGTCA
ATTTCGGCATTGGTCGGCAGCCCCATCGGCGGTTCGTTAATTGCCAAGGC
GCACGGAGAGTATTGGAAGTTGCAGGTCTTTACTGGCATGATGCTGGCGG
GAGGAACGCTGTTCTATTCTGCGACTCGCTTTCGCTTGACCAAAGGCAAG
GTCTGGGTGAAAGTGTAAGGTCCTTTTGTTGGTCGGCTGTTCGATGCATA
CGGGCCTCGATGGCTTCTGCTCATCGGGTCTCTGCTACACGTATTTGGAC
TTCTGATGGCTTCATTTGCTTCTCGGTATTATCAATTCATCCTGTCTCAG
TCAATCTGCAGCCCTTTGGGTGCGAGTATGGTGCTGTACTCCTCGTTCAA
TTGCGTCGCAACCTGGTTCCGAGAAAAGCGCGCTTTGGCAATGGGCATCA
CCGCAAGTGGCTCCAGCCTGGGGGGTGTTGTCATGCCAATTCTTGTCGAT
CATATCATCGATAGGAATGGCTTTGGCTGGGCCATGAGGATTTGCGCCTT
ATTCATGCTCGCCTTGCTGGTTGTGACCAACTTAACCGTTCGCTCCCGGC
TAAGACCGCATCCCACTACTTTGACTTTGACGAGTTATTTGAAGAACTTT
ACCGATATACCCTTCGTTCTGGTGACATTGGCGAGCTTTTTCTATTCGAT
GGGGATGTTTATCCCCATTACATATATCGTCACCTACGGCCAACATGTGG
GTATGCGGACCAGTCTCGCTGGGTACCTCGTCTCCATCTTCAATGCTGCA
AGGCGTTGGCATATTTCAAGCATACTATCAAACCCATCAGCTCCGAACCA
TGTCCGCCAGCACCGTGTCCTGGATTCCCGGGATATCTATGTTCATGATG
TTTATTACGATGAGCAGGGAGAATGTTACGGACGAGCGGGAGCCTCCAGA
CATTGAGCGAAATGAACCTGCCAAATTTCCAGACGGTGGACTTCGTGCAT
GGCTCGTAGTTGTCGGTGCTTTCTTTGGACTCTTTACAAGCTTTGGGTGG
ACCAATTTGGCATCGGCCGAGTACTGCCGGGGTATGCGGCAGACAAGATC
GGAAACTTCAATATTTCAATATGTGCAGCGGCCCTGTCTACGGTGTTTGT
CCTAGGCTTATGGCTCCCTGGCCACTCTCAGGCAACTGCGATTGCGTTCG
CCGCAACTTTTGGGTTTAGTTCTGGAACCTACACGGCTCTGAGCCCAGCT
TTGGTCGCCCAAATCTCGGACATTCGTGAGATTGGCACCCGGTCGGGAGC
GCTGTATGCTTTCATGTCAATTTCGGCATTGGTCGGCAGCCCCATCGGCG
GTTCGTTAATTGCCAAGGCGCACGGAGAGTATTGGAAGTTGCAGGTCTTT
ACTGGCATGATGCTGGCGGGAGGAACGCTGTTCTATTCTGCGACTCGCTT
TCGCTTGACCAAAGGCAAGGTCTGGGTGAAAGTGTAAGGTCCTTTTGTTG
GTCGGCTGTTCGATGCATACGGGCCTCGATGGCTTCTGCTCATCGGGTCT
CTGCTACACGTATTTGGACTTCTGATGGCTTCATTTGCTTCTCGGTATTA
TCAATTCATCCTGTCTCAGTCAATCTGCAGCCCTTTGGGTGCGAGTATGG
TGCTGTACTCCTCGTTCAATTGCGTCGCAACCTGGTTCCGAGAAAAGCGC
GCTTTGGCAATGGGCATCACCGCAAGTGGCTCCAGCCTGGGGGGTGTTGT
CATGCCAATTCTTGTCGATCATATCATCGATAGGAATGGCTTTGGCTGGG
CCATGAGGATTTGCGCCTTATTCATGCTCGCCTTGCTGGTTGTGACCAAC
TTAACCGTTCGCTCCCGGCTAAGACCGCATCCCACTACTTTGACTTTGAC
GAGTTATTTGAAGAACTTTACCGATATACCCTTCGTTCTGGTGACATTGG
CGAGCTTTTTCTATTCGATGGGGATGTTTATCCCCATTACATATATCGTC
ACCTACGGCCAACATGTGGGTATGCGGACCAGTCTCGCTGGGTACCTCGT
CTCCATCTTCAATGCTGCAAGGCGTTGGCATATTTCAAGCATACTATCAA
ACCCATCAGCTCCGAACCATGTCCGCCAGCACCGTGTCCTGGATTCCCGG
GATATCTATGTTCATGATGTTTATTACGATGAGCAGGGAGAATGTTACGG
ACGAGCGGGAGCCTCCAGACATTGAGCGAAATGAACCTGCCAAATTTCCA
GACGGTGGACTTCGTGCATGGCTCGTAGTTGTCGGTGCTTTCTTTGGACT
CTTTACAAGCTTTGGGTGGACCAATT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000636-T1.utr5p1 | KJC3_000636-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR020846 |
| DBxref | InterPro:IPR011701 |
| DBxref | PFAM:PF13347 |
| DBxref | PFAM:PF07690 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:1428278..1429787 - |
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